Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g02450.t01
CDS Infomation

cds chromosome:12X:17:2199755:2201831:-1 gene:VIT_17s0000g02450 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubulin beta chain [Source:UniProtKB/TrEMBL;Acc:F6GSK4]
Sequence

ATGCGTGAGATTCTTCACATTCAGGGAGGGCAATGTGGGAACCAAATTGGATCAAAGTTC
TGGGAAGTTGTATGTGATGAACATGGCATTGATCCCACCGGCCGGTACACCGGAAATTCT
GATTTGCAGCTGGAGAGAGTCAATGTGTACTATAATGAGGCCGGTGGCGGCCGGTTTGTG
CCGCGGGCGGTGCTCATGGACCTTGAGCCAGGCACCATGGACAGCATCCGGACTGGTCCC
TTTGGCCAAATTTTCCGGCCGGATAACTTTGTTTTTGGGCAGTCTGGTGCCGGAAACAAT
TGGGCGAAGGGACACTACACGGAAGGCGCAGAGCTTATTGATTCGGTCCTTGATGTTGTG
AGGAAGGAGGTTGAGAATTGTGACTGTTTGCAAGGATTTCAAGTATGTCATTCTCTTGGA
GGTGGAACGGGGTCTGGAATGGGAACTCTGCTCATTTCAAAGATCCGAGAAGAGTACCCA
GATAGGATGATGCTTACATTTTCAGTCTTCCCGTCTCCAAAGGTATCCGACACAGTTGTA
GAGCCTTACAATGCAACGCTTTCTGTTCATCAGCTGGTGGAGAATGCCGATGAGTGTATG
GTGCTTGACAATGAAGCACTCTATGATATCTGCTTCAGAACTCTCAAGCTCGCCACCCCA
AGTTTTGGGGACTTGAATCATCTGATCTCTGCAACAATGAGTGGAGTAACTTGCTGCTTG
AGGTTTCCGGGCCAGCTGAACTCAGACCTTCGAAAGCTAGCCGTGAACTTAATCCCATTC
CCTCGACTTCACTTCTTCATGGTGGGGTTTGCTCCTTTGACCTCCCGCGGATCGCAGCAG
TACCGGGCACTGACTGTCCCTGAGCTGACGCAACAAATGTGGGATGCCAAGAACATGATG
TGCGCAGCTGATCCACGGCACGGCCGTTACCTCACAGCATCGGCCATGTTTAGAGGCAAA
ATGAGCACGAAAGAAGTGGATGAACAGATAATAAATGTGCAGAACAAAAACTCTTCCTAC
TTCGTGGAGTGGATCCCAAACAATGTCAAGTCTAGTGTCTGTGACATCCCTCCAAAAGGG
CTCTCAATGGCTTCGACTTTCATTGGGAATTCGACCTCTATACAGGAGATGTTCCGGAGA
GTAAGCGAGCAGTTTACAGCCATGTTTAGGAGGAAGGCCTTCTTGCACTGGTATACCGGA
GAAGGAATGGATGAGATGGAGTTTACTGAAGCGGAGAGTAACATGAATGACCTTGTTGCT
GAGTACCAACAGTACCAGGATGCTACAGCTGATGATGAGGGTGATTATGAAGACGATGAT
GGGGACACTGAGAGCTGA

Peptide Sequence

PEP ID

VIT_17s0000g02450.t01
PEP Infomation

pep chromosome:12X:17:2199755:2201831:-1 gene:VIT_17s0000g02450 transcript:VIT_17s0000g02450.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubulin beta chain [Source:UniProtKB/TrEMBL;Acc:F6GSK4]
Sequence

MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEAGGGRFV
PRAVLMDLEPGTMDSIRTGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEVENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPSFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKG
LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA
EYQQYQDATADDEGDYEDDDGDTES

Transcript Sequence

Transcript ID

VIT_17s0000g02450.t01
Transcript Infomation

cdna chromosome:12X:17:2199755:2201831:-1 gene:VIT_17s0000g02450 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubulin beta chain [Source:UniProtKB/TrEMBL;Acc:F6GSK4]
Sequence

AGCCAACATGCGTGAGATTCTTCACATTCAGGGAGGGCAATGTGGGAACCAAATTGGATC
AAAGTTCTGGGAAGTTGTATGTGATGAACATGGCATTGATCCCACCGGCCGGTACACCGG
AAATTCTGATTTGCAGCTGGAGAGAGTCAATGTGTACTATAATGAGGCCGGTGGCGGCCG
GTTTGTGCCGCGGGCGGTGCTCATGGACCTTGAGCCAGGCACCATGGACAGCATCCGGAC
TGGTCCCTTTGGCCAAATTTTCCGGCCGGATAACTTTGTTTTTGGGCAGTCTGGTGCCGG
AAACAATTGGGCGAAGGGACACTACACGGAAGGCGCAGAGCTTATTGATTCGGTCCTTGA
TGTTGTGAGGAAGGAGGTTGAGAATTGTGACTGTTTGCAAGGATTTCAAGTATGTCATTC
TCTTGGAGGTGGAACGGGGTCTGGAATGGGAACTCTGCTCATTTCAAAGATCCGAGAAGA
GTACCCAGATAGGATGATGCTTACATTTTCAGTCTTCCCGTCTCCAAAGGTATCCGACAC
AGTTGTAGAGCCTTACAATGCAACGCTTTCTGTTCATCAGCTGGTGGAGAATGCCGATGA
GTGTATGGTGCTTGACAATGAAGCACTCTATGATATCTGCTTCAGAACTCTCAAGCTCGC
CACCCCAAGTTTTGGGGACTTGAATCATCTGATCTCTGCAACAATGAGTGGAGTAACTTG
CTGCTTGAGGTTTCCGGGCCAGCTGAACTCAGACCTTCGAAAGCTAGCCGTGAACTTAAT
CCCATTCCCTCGACTTCACTTCTTCATGGTGGGGTTTGCTCCTTTGACCTCCCGCGGATC
GCAGCAGTACCGGGCACTGACTGTCCCTGAGCTGACGCAACAAATGTGGGATGCCAAGAA
CATGATGTGCGCAGCTGATCCACGGCACGGCCGTTACCTCACAGCATCGGCCATGTTTAG
AGGCAAAATGAGCACGAAAGAAGTGGATGAACAGATAATAAATGTGCAGAACAAAAACTC
TTCCTACTTCGTGGAGTGGATCCCAAACAATGTCAAGTCTAGTGTCTGTGACATCCCTCC
AAAAGGGCTCTCAATGGCTTCGACTTTCATTGGGAATTCGACCTCTATACAGGAGATGTT
CCGGAGAGTAAGCGAGCAGTTTACAGCCATGTTTAGGAGGAAGGCCTTCTTGCACTGGTA
TACCGGAGAAGGAATGGATGAGATGGAGTTTACTGAAGCGGAGAGTAACATGAATGACCT
TGTTGCTGAGTACCAACAGTACCAGGATGCTACAGCTGATGATGAGGGTGATTATGAAGA
CGATGATGGGGACACTGAGAGCTGA