Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g02440.t01
CDS Infomation

cds chromosome:12X:17:2193596:2196899:-1 gene:VIT_17s0000g02440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGCAACATACCCACGGTGGAAGACAATAGCAACAACATCTTCTAGCGACTCTTCC
ACACTTCCCTGTTGCTTCTTCTTCTCCACCAGTCCTAGCCCACGTACAAAACGAGGTCGC
TTCGCTACTTTCTCTTCTTTGTTGCTGAATCCTCATGAATATCATTTGGGTCCAGCAAAG
AAGAAGAAATCAGTGGAAATTGGGAGACCCCATCAGCAAACAGTCTCAATTATTCATGAT
AAGTGCATCAGCAAGGCTAAGGTTAAGGCAAAGTTTGATTGGAAAAAGAGCATTCAGAAG
GGAGCCAAGTCAAGGCCTTTGTGGAGGAGGGTTCTGTTTGCATCCAAAAAGATGAAAAGC
ATCATATTGCTGAATGTAGTCACCATTGTCTACGCAAGCAACATTGCAGTTGTGAAAGAG
GTGGAAACTATAATGGACCCAGCAGCCTTCTCTGCAGTGCGATTTGCTGTGTCAGCCATC
CCATTCCTACCCTTTGTTTTTCGGGCACGAGGTGATGTTCAGACCCGTAATGCTGGGCTA
GAGTTGGGACTGTGGATCAGCTTAGGCTACCTTGCTGAGGCACTCGGACTACTCACATCT
GAAGCTGGGCGAGCATCCTTTTTTTCGTTCATTACAGTTATTGTGGTACCTCTTCTTGAT
TCAATGTTGGGGGCAATAGTACCTGCCAGAACCTGGTTTGGAGTTCTCATGTCTGTACTA
GGGGTTGCTATGCTGGAATGCAGTGGATCTCCTCCTAACGTTGGAGATCTTTTGAACTTC
CTAAGTGCAATATTTTTCGGTATTCACATCCTTCGAACCGAACAATTGTCGAGAAGCACA
AAGAAAGAGAATTTCCTGCCTCTACTTGGATATGAGGTGTGTGTTGTTGCTCTGTTATCT
ACATTCTGGTATGTAATTGGAGGATGGTTTGATGGAATTCAAGATTCTGACCAAGCATCC
TGGACATGGGCAGTGCTGTGGGATTCTATGGTTGCGTTTCCATGGATTCCTGCACTTTAT
ACTGGTGTATTCTCAACTGGATTATGCTTATGGCTGGAGATTGGTGCAATGCGCGATGTT
TCAGCAACAGAAACAGCCATAATTTACGGCCTAGAACCGCTATGGGGAGCTGGTTTTGCA
TGGTTTCTCCTGGGTGAGAGATGGGGCACAACCGGATGGATCGGAGCTGCTCTCTTACTG
GGTGGAAGCTTAACAGTACAAATGTTTGGATCTTCATCTTCCAGTGAATCAATAGGAGTT
GAAGATGGGGATAAGGAAGTAGATATTCTTGTTTCGGAGAAGCAAAAGCTGCAGACTGGT
CTCTCTGCTTCACCTGTAGTTATTATCAGCTCCAGAAAGGATGTAATTGACATGTTAAAG
AAGTGA

Peptide Sequence

PEP ID

VIT_17s0000g02440.t01
PEP Infomation

pep chromosome:12X:17:2193596:2196899:-1 gene:VIT_17s0000g02440 transcript:VIT_17s0000g02440.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAATYPRWKTIATTSSSDSSTLPCCFFFSTSPSPRTKRGRFATFSSLLLNPHEYHLGPAK
KKKSVEIGRPHQQTVSIIHDKCISKAKVKAKFDWKKSIQKGAKSRPLWRRVLFASKKMKS
IILLNVVTIVYASNIAVVKEVETIMDPAAFSAVRFAVSAIPFLPFVFRARGDVQTRNAGL
ELGLWISLGYLAEALGLLTSEAGRASFFSFITVIVVPLLDSMLGAIVPARTWFGVLMSVL
GVAMLECSGSPPNVGDLLNFLSAIFFGIHILRTEQLSRSTKKENFLPLLGYEVCVVALLS
TFWYVIGGWFDGIQDSDQASWTWAVLWDSMVAFPWIPALYTGVFSTGLCLWLEIGAMRDV
SATETAIIYGLEPLWGAGFAWFLLGERWGTTGWIGAALLLGGSLTVQMFGSSSSSESIGV
EDGDKEVDILVSEKQKLQTGLSASPVVIISSRKDVIDMLKK

Transcript Sequence

Transcript ID

VIT_17s0000g02440.t01
Transcript Infomation

cdna chromosome:12X:17:2193596:2196899:-1 gene:VIT_17s0000g02440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGCAACATACCCACGGTGGAAGACAATAGCAACAACATCTTCTAGCGACTCTTCC
ACACTTCCCTGTTGCTTCTTCTTCTCCACCAGTCCTAGCCCACGTACAAAACGAGGTCGC
TTCGCTACTTTCTCTTCTTTGTTGCTGAATCCTCATGAATATCATTTGGGTCCAGCAAAG
AAGAAGAAATCAGTGGAAATTGGGAGACCCCATCAGCAAACAGTCTCAATTATTCATGAT
AAGTGCATCAGCAAGGCTAAGGTTAAGGCAAAGTTTGATTGGAAAAAGAGCATTCAGAAG
GGAGCCAAGTCAAGGCCTTTGTGGAGGAGGGTTCTGTTTGCATCCAAAAAGATGAAAAGC
ATCATATTGCTGAATGTAGTCACCATTGTCTACGCAAGCAACATTGCAGTTGTGAAAGAG
GTGGAAACTATAATGGACCCAGCAGCCTTCTCTGCAGTGCGATTTGCTGTGTCAGCCATC
CCATTCCTACCCTTTGTTTTTCGGGCACGAGGTGATGTTCAGACCCGTAATGCTGGGCTA
GAGTTGGGACTGTGGATCAGCTTAGGCTACCTTGCTGAGGCACTCGGACTACTCACATCT
GAAGCTGGGCGAGCATCCTTTTTTTCGTTCATTACAGTTATTGTGGTACCTCTTCTTGAT
TCAATGTTGGGGGCAATAGTACCTGCCAGAACCTGGTTTGGAGTTCTCATGTCTGTACTA
GGGGTTGCTATGCTGGAATGCAGTGGATCTCCTCCTAACGTTGGAGATCTTTTGAACTTC
CTAAGTGCAATATTTTTCGGTATTCACATCCTTCGAACCGAACAATTGTCGAGAAGCACA
AAGAAAGAGAATTTCCTGCCTCTACTTGGATATGAGGTGTGTGTTGTTGCTCTGTTATCT
ACATTCTGGTATGTAATTGGAGGATGGTTTGATGGAATTCAAGATTCTGACCAAGCATCC
TGGACATGGGCAGTGCTGTGGGATTCTATGGTTGCGTTTCCATGGATTCCTGCACTTTAT
ACTGGTGTATTCTCAACTGGATTATGCTTATGGCTGGAGATTGGTGCAATGCGCGATGTT
TCAGCAACAGAAACAGCCATAATTTACGGCCTAGAACCGCTATGGGGAGCTGGTTTTGCA
TGGTTTCTCCTGGGTGAGAGATGGGGCACAACCGGATGGATCGGAGCTGCTCTCTTACTG
GGTGGAAGCTTAACAGTACAAATGTTTGGATCTTCATCTTCCAGTGAATCAATAGGAGTT
GAAGATGGGGATAAGGAAGTAGATATTCTTGTTTCGGAGAAGCAAAAGCTGCAGACTGGT
CTCTCTGCTTCACCTGTAGTTATTATCAGCTCCAGAAAGGATGTAATTGACATGTTAAAG
AAGTGATCACGTTCTCCTATATTTCTCTAAGTTTATGTAAATTCTTTCACAAGTCCACAG
GCTGCAGTGATTATCATATGTTCCTTTCCTAGTTTTCTCCAAGATTTTGAAGGCTAATGT
GTACATCTATAGATACATTTTTTGTACTTGAGTACAGAAATAGAAGGGTCCAAAG