Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g02400.t01
CDS Infomation

cds chromosome:12X:17:2109284:2134572:1 gene:VIT_17s0000g02400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCGTCATCTGCGAATCTGTGGGTTTTGTTGGGATTGGGATTGGCTGGCGTATTG
TTGATGACCAGAAAGCTTAAGAAAACCATCAGAGAAGATTTTGGCGCATTCGTCCAACGT
CTTCAGCTTCTCCCTCCGCCCCAGCCCGCTCCTCCCAAAGCTCCTCATCCCCTCACCAAC
CTCTCCTTCGCCGTCTCAGACGTATTTGACATTGAAGGATATGTGACTGGGTTTGGCAAT
CCAGACTGGGCCAGGACTCATGACACAGCTTCTAGGACCTCTCCTGTGGTTTCAGCTCTT
GTTGAAGGAGGTGCCACATGCACTGGGAAAACTGTTGTGGATGAAATGGCATATAGTATC
AATGGAGAAAATAAGCATTATGGTACACCCACCAATCCTGCTGCTCCTTCACGGATACCA
GGAGGATCCTCCAGTGGAGCTGCTGTGGCCGTAGCTGCAAATTTTGTTGATTTCTCTTTA
GGCCTCGATACTGTTGGTGGCGTGAGAGTACCTGCTGCATTTTGTGGTGTTATAGGATTC
CGGCCCTCACATGGGGCGGTTTCTCACATGGGGATCATTCATGTTTCATCGAGTCTTGAT
ACTGTTGGATGGTTTGCTAAGGATCCTAGTATACTTCGTCGTGTTGGCCATGTGCTACTG
CAACTTACATATGCTGTTCAACGTAGTCCTAGACAAATTATATTTGCTGATGACTGTTTC
CAATCACTAAGGATTCCTGTTGACAGGGTTTATCAGGTGGTGCTTAAATCAACTGAGAAG
CTGTTTGGAAGACAAGTTCTGAAGCGTGAAAATCTTGAGAACTACTTAGATTCTAAAGTT
CCAAGCTTGAAAGCATTTCATAGCCAGAAAACAAATGGTGAAACCAGAAATTCTTTGATA
AGATCTCTTGTAAAAATTATGCATTGTCTTCAAAGGCATGAGTTCAAGCATAATCATGAA
GAATGGATCAATTCAGTGAAGCCTATCCTTGATGCTTCTATTTCATCACAATTACATGAT
GTATTGGAGGTGGCAGATACTGAGATTGAAAACTGTCAATCATCCAGGATGGAAATACGT
TCTGCTCTTAACTCTCTTTTGAAGGATGATGGAATTCTGGTGATCCCTACTGTTGCTGAC
CCTCCCCCAAAACTTGGTGGGAAGGAGAGTTTGTCAGAGGAATACCAGAACCGTACTCTT
GGTCTGTTGAGTATTGCTAGTATGTCAGGTTGCTGTCAGGTCACAGTACCATTGGGACTT
TATGACAAGTATCCTGTTTCAGTATCTTTCATGGCTAGACATGGGGGTGATCGCTTTTTA
CTAGATACAGTGCAGACCATGTATGCATCTCTTCAGGAGCAGGCTGACATTGCTGCAAAG
TCCAAACTATCAAGTAATGCTGTTGACCGGGAAACATCTGCTGAAATTGCTAAAGAAAAG
GGTAATCAAGCATTCAAAGATAAACAGTGGCAGAAGGCTGTTGGCTTCTATACAGAAGCC
ATTAAACTTAGTGGCAATAATGCAACATACTACAGCAATAGAGCTGCAGCATATCTGGAA
ATGGGAAGTTTCCTCCAAGCTGAGGCTGATTGTACAGAAGCAATCAATCTTGATAAAAAG
AATGTGAAGGCCTACTTAAGGAGAGGCACGGCAAGAGAGATGCTTGGCTATTATAAGGAT
GCAATTGAAGATTTCAGATACGCACTTGTTCTTGAGCCAACCAATAAAAGAGCATCCCTT
TCTGCTGACAGACTAAAGAAGTTATTTCAGTAA

Peptide Sequence

PEP ID

VIT_17s0000g02400.t01
PEP Infomation

pep chromosome:12X:17:2109284:2134572:1 gene:VIT_17s0000g02400 transcript:VIT_17s0000g02400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASSSANLWVLLGLGLAGVLLMTRKLKKTIREDFGAFVQRLQLLPPPQPAPPKAPHPLTN
LSFAVSDVFDIEGYVTGFGNPDWARTHDTASRTSPVVSALVEGGATCTGKTVVDEMAYSI
NGENKHYGTPTNPAAPSRIPGGSSSGAAVAVAANFVDFSLGLDTVGGVRVPAAFCGVIGF
RPSHGAVSHMGIIHVSSSLDTVGWFAKDPSILRRVGHVLLQLTYAVQRSPRQIIFADDCF
QSLRIPVDRVYQVVLKSTEKLFGRQVLKRENLENYLDSKVPSLKAFHSQKTNGETRNSLI
RSLVKIMHCLQRHEFKHNHEEWINSVKPILDASISSQLHDVLEVADTEIENCQSSRMEIR
SALNSLLKDDGILVIPTVADPPPKLGGKESLSEEYQNRTLGLLSIASMSGCCQVTVPLGL
YDKYPVSVSFMARHGGDRFLLDTVQTMYASLQEQADIAAKSKLSSNAVDRETSAEIAKEK
GNQAFKDKQWQKAVGFYTEAIKLSGNNATYYSNRAAAYLEMGSFLQAEADCTEAINLDKK
NVKAYLRRGTAREMLGYYKDAIEDFRYALVLEPTNKRASLSADRLKKLFQ

Transcript Sequence

Transcript ID

VIT_17s0000g02400.t01
Transcript Infomation

cdna chromosome:12X:17:2109284:2134572:1 gene:VIT_17s0000g02400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTGGGAGTGACACGCCACTAGTGAAGTAATTGGCTCGGCCTCTCTCATACAAAACAAAA
CCAACACCCACCCACGGTACGCAGTCTAGGTTTCGGAGTGGGCAGGGTTACTGTGTTATC
CGCTTCTCCTTCTCCATCTCCGTCTCTCCCATGGCTTCGTCATCTGCGAATCTGTGGGTT
TTGTTGGGATTGGGATTGGCTGGCGTATTGTTGATGACCAGAAAGCTTAAGAAAACCATC
AGAGAAGATTTTGGCGCATTCGTCCAACGTCTTCAGCTTCTCCCTCCGCCCCAGCCCGCT
CCTCCCAAAGCTCCTCATCCCCTCACCAACCTCTCCTTCGCCGTCTCAGACGTATTTGAC
ATTGAAGGATATGTGACTGGGTTTGGCAATCCAGACTGGGCCAGGACTCATGACACAGCT
TCTAGGACCTCTCCTGTGGTTTCAGCTCTTGTTGAAGGAGGTGCCACATGCACTGGGAAA
ACTGTTGTGGATGAAATGGCATATAGTATCAATGGAGAAAATAAGCATTATGGTACACCC
ACCAATCCTGCTGCTCCTTCACGGATACCAGGAGGATCCTCCAGTGGAGCTGCTGTGGCC
GTAGCTGCAAATTTTGTTGATTTCTCTTTAGGCCTCGATACTGTTGGTGGCGTGAGAGTA
CCTGCTGCATTTTGTGGTGTTATAGGATTCCGGCCCTCACATGGGGCGGTTTCTCACATG
GGGATCATTCATGTTTCATCGAGTCTTGATACTGTTGGATGGTTTGCTAAGGATCCTAGT
ATACTTCGTCGTGTTGGCCATGTGCTACTGCAACTTACATATGCTGTTCAACGTAGTCCT
AGACAAATTATATTTGCTGATGACTGTTTCCAATCACTAAGGATTCCTGTTGACAGGGTT
TATCAGGTGGTGCTTAAATCAACTGAGAAGCTGTTTGGAAGACAAGTTCTGAAGCGTGAA
AATCTTGAGAACTACTTAGATTCTAAAGTTCCAAGCTTGAAAGCATTTCATAGCCAGAAA
ACAAATGGTGAAACCAGAAATTCTTTGATAAGATCTCTTGTAAAAATTATGCATTGTCTT
CAAAGGCATGAGTTCAAGCATAATCATGAAGAATGGATCAATTCAGTGAAGCCTATCCTT
GATGCTTCTATTTCATCACAATTACATGATGTATTGGAGGTGGCAGATACTGAGATTGAA
AACTGTCAATCATCCAGGATGGAAATACGTTCTGCTCTTAACTCTCTTTTGAAGGATGAT
GGAATTCTGGTGATCCCTACTGTTGCTGACCCTCCCCCAAAACTTGGTGGGAAGGAGAGT
TTGTCAGAGGAATACCAGAACCGTACTCTTGGTCTGTTGAGTATTGCTAGTATGTCAGGT
TGCTGTCAGGTCACAGTACCATTGGGACTTTATGACAAGTATCCTGTTTCAGTATCTTTC
ATGGCTAGACATGGGGGTGATCGCTTTTTACTAGATACAGTGCAGACCATGTATGCATCT
CTTCAGGAGCAGGCTGACATTGCTGCAAAGTCCAAACTATCAAGTAATGCTGTTGACCGG
GAAACATCTGCTGAAATTGCTAAAGAAAAGGGTAATCAAGCATTCAAAGATAAACAGTGG
CAGAAGGCTGTTGGCTTCTATACAGAAGCCATTAAACTTAGTGGCAATAATGCAACATAC
TACAGCAATAGAGCTGCAGCATATCTGGAAATGGGAAGTTTCCTCCAAGCTGAGGCTGAT
TGTACAGAAGCAATCAATCTTGATAAAAAGAATGTGAAGGCCTACTTAAGGAGAGGCACG
GCAAGAGAGATGCTTGGCTATTATAAGGATGCAATTGAAGATTTCAGATACGCACTTGTT
CTTGAGCCAACCAATAAAAGAGCATCCCTTTCTGCTGACAGACTAAAGAAGTTATTTCAG
TAAGTGATTGAAATATAATCAAGGCTTCAGGAGGCTCAGTGTCACAGAAACAGGTCTTCC
TCATTCATTACCTTGCCTCATTCCATTCAGAAAGATGATTTTGCCATACCTTCCCAGCAG
CCCCACAGATCTAATTCTTTTTCTCTTGGTTAAGGCATTGTGAAGGCCTGGAGTAGTCAC
TTGATCTAGTCGCCATTTTGGTAGCTGTAGTATATCACTATTGCTGGAACTTGTAATTAT
GGTTCGATTTTGTTTACTCTGATATTTACATTCGGGTTGTAATTCTAGCATTGAGCTGAG
GTTTTATACTTTTGATTTTGGTTGAGGTGATGAAATAATTTTTCCCTTGATTAGTAGCTG
TTCATAGATTTTTAGCTCTTGAATGAATGCGAGGAGTCTGGTGGCTCTCCAAAAACTTCT
CAATTAATTCTTTAGAATGATACCAAAAGGACAA