Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g02320.t01
CDS Infomation

cds chromosome:12X:17:2017703:2033983:1 gene:VIT_17s0000g02320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGAAGAGCTTCAGCTCTCGCCTCCTCCGCTCTCTCCCGAGCTCTCCTCTCCGCCCAA
GACGGCGCCACCACCACTGCCGTCATCCAACACCGGATATTCCAGGCGGCTCTATACGGA
ACCACCACCAGCGCCGCTGCTCAATCCACTCGCCGGAGGTGGTACTCTACGGCTCTCTAT
TCTCTCTCCGGCGGTTCAGCTAAAACCGTGTCTCTTTCCATCGCCGGAGCTCTGTTCTCC
GCTGCCGCCGCCACCTCGCTTTCCGAAGAGGTGTTAGCCAAGGAGCCACCGTCCCCGGAT
CTTGTCCCTAAGGACGTTGTTCTTTATCAGTACGAAGCTTGCCCTTTCTGCAATAAGGTC
AAAGCTTTCTTGGACTATTATGATATACCATACAAAGTTGTGGAGGTCAATCCGCTCAGT
AAAAGAGAGATCAAATGGTCTGATTACAAGAAGGTGCCTATACTGATGGTGAATGATGAG
CAGCTAGTGGATTCATCAGCTATAATTGACAAGATGAGCGACAAGATTCTTCCAAAAAAA
TCTGCTGATTCAGCCTCTGATGATGAAGAGAGAAAGTGGCGGCAGTGGGTTGATAATCAC
TTGGTTCATGTATTATCACCAAACATATACCGAAGTACTTCAGAGGCTCTTGAGTCCTTT
GACTATATCACTAGCAATGGTAATTTTAGCTTCACAGAAAAATTAACTGTGAAGTATGCT
GGAGCTGCAGCTATGTATTTTGTGTCCAAGAAATTGAAGAAGAGACATAATATTACTGAT
GAACGTGCAGCATTGTATGAAGCTGCAGAAACATGGGTTGATGGTCTCAATGGCAGGGAG
TTTCTTGGTGGCTCCAAACCTAATTTAGCTGACCTTGCTGTCTTTGGGGTGTTGAGACCC
ATCCGTTACCTGAGGTCTGGTAGAGATATGGTGGAAAACACTCGTATTGGTGAATGGTAC
ACAAGAATGGAGAATGCTGTGGGGGAGTCATCAAGGATTAAAGCCTAG

Peptide Sequence

PEP ID

VIT_17s0000g02320.t01
PEP Infomation

pep chromosome:12X:17:2017703:2033983:1 gene:VIT_17s0000g02320 transcript:VIT_17s0000g02320.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRRASALASSALSRALLSAQDGATTTAVIQHRIFQAALYGTTTSAAAQSTRRRWYSTALY
SLSGGSAKTVSLSIAGALFSAAAATSLSEEVLAKEPPSPDLVPKDVVLYQYEACPFCNKV
KAFLDYYDIPYKVVEVNPLSKREIKWSDYKKVPILMVNDEQLVDSSAIIDKMSDKILPKK
SADSASDDEERKWRQWVDNHLVHVLSPNIYRSTSEALESFDYITSNGNFSFTEKLTVKYA
GAAAMYFVSKKLKKRHNITDERAALYEAAETWVDGLNGREFLGGSKPNLADLAVFGVLRP
IRYLRSGRDMVENTRIGEWYTRMENAVGESSRIKA

Transcript Sequence

Transcript ID

VIT_17s0000g02320.t01
Transcript Infomation

cdna chromosome:12X:17:2017703:2033983:1 gene:VIT_17s0000g02320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCCAACCTCCAATTTATCAAAGCTTCAATGATCCAGAAAACCCAGAAAATTCCAAACCC
ACGATTCGCCATGAGAAGAGCTTCAGCTCTCGCCTCCTCCGCTCTCTCCCGAGCTCTCCT
CTCCGCCCAAGACGGCGCCACCACCACTGCCGTCATCCAACACCGGATATTCCAGGCGGC
TCTATACGGAACCACCACCAGCGCCGCTGCTCAATCCACTCGCCGGAGGTGGTACTCTAC
GGCTCTCTATTCTCTCTCCGGCGGTTCAGCTAAAACCGTGTCTCTTTCCATCGCCGGAGC
TCTGTTCTCCGCTGCCGCCGCCACCTCGCTTTCCGAAGAGGTGTTAGCCAAGGAGCCACC
GTCCCCGGATCTTGTCCCTAAGGACGTTGTTCTTTATCAGTACGAAGCTTGCCCTTTCTG
CAATAAGGTCAAAGCTTTCTTGGACTATTATGATATACCATACAAAGTTGTGGAGGTCAA
TCCGCTCAGTAAAAGAGAGATCAAATGGTCTGATTACAAGAAGGTGCCTATACTGATGGT
GAATGATGAGCAGCTAGTGGATTCATCAGCTATAATTGACAAGATGAGCGACAAGATTCT
TCCAAAAAAATCTGCTGATTCAGCCTCTGATGATGAAGAGAGAAAGTGGCGGCAGTGGGT
TGATAATCACTTGGTTCATGTATTATCACCAAACATATACCGAAGTACTTCAGAGGCTCT
TGAGTCCTTTGACTATATCACTAGCAATGGTAATTTTAGCTTCACAGAAAAATTAACTGT
GAAGTATGCTGGAGCTGCAGCTATGTATTTTGTGTCCAAGAAATTGAAGAAGAGACATAA
TATTACTGATGAACGTGCAGCATTGTATGAAGCTGCAGAAACATGGGTTGATGGTCTCAA
TGGCAGGGAGTTTCTTGGTGGCTCCAAACCTAATTTAGCTGACCTTGCTGTCTTTGGGGT
GTTGAGACCCATCCGTTACCTGAGGTCTGGTAGAGATATGGTGGAAAACACTCGTATTGG
TGAATGGTACACAAGAATGGAGAATGCTGTGGGGGAGTCATCAAGGATTAAAGCCTAGAC
CAGAAATCATGTTGAATTGGCAAGTCTGCACTCTGCTTCAACCATAAGTTTGCTGGTTTT
GTTGCCAAACTAAGTACATTCTTTATAGAAGGAAAGAACAAAATTTTTTGGAAGAGACAG
TTGTGGCACTTTTCCCTTTAAAAGATTTTTCAAAGTGGTAATGGGTGATTTAATATTATG
CAAAATTTTGCTATTGCAATTCATTGATCAGAGTAAGAGGTTAAAATCATTATTATAAAT
TTTGGTGGAAATACTGATCAATAGGACAGAATAAATATGTAGCGAATTGTGAACCTCAAA
ATTGAGGAATGTGCTATTATGATTTCTAGTAAATAATAAGCAATATTTTTAGATGATTGT
TTGAGGCTTGATGCGTTCTTCTCCCAG