Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g02300.t01
CDS Infomation

cds chromosome:12X:17:1971633:1992847:-1 gene:VIT_17s0000g02300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCATAGAAGATGCCATGGCCTCACTCAACCAAAAAGTTAACATCATCGGCGTTGTA
GTGGAAATGGGCATGCCTAAGCGGTCCAAAGGAACTGATTGTTTTTGTACTGTAAAGATA
GTTGATCAATCACACAGGAGTTCTGGGATATCTGTTAATGTTTTTGCTGAAAATATGGAA
AAGCTTCCACATGTCGAGTCAGCTGGAGATATTATTCAGTTTTCCCATGTAGTGATGAAG
ACTCATGGTCAGGATGTAAATGCTGTTTTCAACAAAAAATTCTCTTCATTTGCCATCTTT
GAAGGGAAATATGGTGAAGATTTCAGTCCTTATCAAGTTTCTTCAAATTTCCGCCCTAGA
GACCAGGACAAGAAGTTTGTAAAAGACTTGAGAAAATGGTTGGCTGATTCTGAAATTGAT
AAAGGGATGAAAGAACCCCTGTCGTTGAGAGAGATCAGGGAAGGAGAACGTGTTGATTTG
TTTTGTAAGATTCTTCATATCTGTGAAGTCACTAAAGATGAGTGGATAATCTTTGTTTGG
GATGGAACTGATACTCCTCCAGTTAGTGTCCAGACAGTGCTGGAAGATGAAATGGACAAT
CCACTTCCTTTACAATTGGAGTCTTTGCCTTTAAGTAGAGATATTTTGTGTACATTTCCT
ACTGTGGGAACTATATTAAGGGTGATTGTTGATCAAGGCAGTGAGAAGCTTAGCCTCCAC
TTACTAAAGGTTGGAAAGTGGGTGAGATTTCTCAAAATAATCTGTGAAGTGCAAGCAGGA
TTGTGGCGTGGTGTGTTGATGCCTTCAACAAAGCTTCGATATATGCCAGATGCTGACCTT
CTTGTATCACAACGGCAAAGATTTTATGATGAGCGGCTGTCTTCAAAATGGGAGCGGATG
CCATTGTCAAGCTTTCCTTGGCCTTCTCGTATCACAGAGACTGATTATGAGCATGTGCCA
GTTGTTACATTGATGGATGTTGTCACCCATTCAGAGGTAACAGCTAAATTCAAGTGTGTA
GTTCGAGTTGCAGCAATAGTTCCTTGGCGTGCAGAGGACTTCTGCTCTCCTCCTGGAACA
TATAGGACGAGGTTGACTCTGGAGGATCCAACTGCCAGAATCCATGCTTTTGTGCATGCT
GAAGATGGGGAGAAGTTTTTTGAGGGTTATCCCCCAGTTGATGTGTTGAAAAGGAAACGA
AACAAATTGCTGGGCATAGCTGAAAGCGATGACGGCAATGAAATCAATAATGCTCCCAGA
AATCCACCATGGGTGCAGTGTTGCATTAAGTCGTATTACCTTGTAAAGGGTGATGTTTGG
GGCAGTAGGAGGTATCGAATCTTTGGCACCAGGCTGGTAACGTAA

Peptide Sequence

PEP ID

VIT_17s0000g02300.t01
PEP Infomation

pep chromosome:12X:17:1971633:1992847:-1 gene:VIT_17s0000g02300 transcript:VIT_17s0000g02300.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAIEDAMASLNQKVNIIGVVVEMGMPKRSKGTDCFCTVKIVDQSHRSSGISVNVFAENME
KLPHVESAGDIIQFSHVVMKTHGQDVNAVFNKKFSSFAIFEGKYGEDFSPYQVSSNFRPR
DQDKKFVKDLRKWLADSEIDKGMKEPLSLREIREGERVDLFCKILHICEVTKDEWIIFVW
DGTDTPPVSVQTVLEDEMDNPLPLQLESLPLSRDILCTFPTVGTILRVIVDQGSEKLSLH
LLKVGKWVRFLKIICEVQAGLWRGVLMPSTKLRYMPDADLLVSQRQRFYDERLSSKWERM
PLSSFPWPSRITETDYEHVPVVTLMDVVTHSEVTAKFKCVVRVAAIVPWRAEDFCSPPGT
YRTRLTLEDPTARIHAFVHAEDGEKFFEGYPPVDVLKRKRNKLLGIAESDDGNEINNAPR
NPPWVQCCIKSYYLVKGDVWGSRRYRIFGTRLVT

Transcript Sequence

Transcript ID

VIT_17s0000g02300.t01
Transcript Infomation

cdna chromosome:12X:17:1971633:1992847:-1 gene:VIT_17s0000g02300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGTTGAGTCAATCTGCTACTAGCCTACTGCCAACGGTATAGTCCTGTGTGGGATGGGTG
GTGAGGACGACTATAGATTCATGGCCATAGAAGATGCCATGGCCTCACTCAACCAAAAAG
TTAACATCATCGGCGTTGTAGTGGAAATGGGCATGCCTAAGCGGTCCAAAGGAACTGATT
GTTTTTGTACTGTAAAGATAGTTGATCAATCACACAGGAGTTCTGGGATATCTGTTAATG
TTTTTGCTGAAAATATGGAAAAGCTTCCACATGTCGAGTCAGCTGGAGATATTATTCAGT
TTTCCCATGTAGTGATGAAGACTCATGGTCAGGATGTAAATGCTGTTTTCAACAAAAAAT
TCTCTTCATTTGCCATCTTTGAAGGGAAATATGGTGAAGATTTCAGTCCTTATCAAGTTT
CTTCAAATTTCCGCCCTAGAGACCAGGACAAGAAGTTTGTAAAAGACTTGAGAAAATGGT
TGGCTGATTCTGAAATTGATAAAGGGATGAAAGAACCCCTGTCGTTGAGAGAGATCAGGG
AAGGAGAACGTGTTGATTTGTTTTGTAAGATTCTTCATATCTGTGAAGTCACTAAAGATG
AGTGGATAATCTTTGTTTGGGATGGAACTGATACTCCTCCAGTTAGTGTCCAGACAGTGC
TGGAAGATGAAATGGACAATCCACTTCCTTTACAATTGGAGTCTTTGCCTTTAAGTAGAG
ATATTTTGTGTACATTTCCTACTGTGGGAACTATATTAAGGGTGATTGTTGATCAAGGCA
GTGAGAAGCTTAGCCTCCACTTACTAAAGGTTGGAAAGTGGGTGAGATTTCTCAAAATAA
TCTGTGAAGTGCAAGCAGGATTGTGGCGTGGTGTGTTGATGCCTTCAACAAAGCTTCGAT
ATATGCCAGATGCTGACCTTCTTGTATCACAACGGCAAAGATTTTATGATGAGCGGCTGT
CTTCAAAATGGGAGCGGATGCCATTGTCAAGCTTTCCTTGGCCTTCTCGTATCACAGAGA
CTGATTATGAGCATGTGCCAGTTGTTACATTGATGGATGTTGTCACCCATTCAGAGGTAA
CAGCTAAATTCAAGTGTGTAGTTCGAGTTGCAGCAATAGTTCCTTGGCGTGCAGAGGACT
TCTGCTCTCCTCCTGGAACATATAGGACGAGGTTGACTCTGGAGGATCCAACTGCCAGAA
TCCATGCTTTTGTGCATGCTGAAGATGGGGAGAAGTTTTTTGAGGGTTATCCCCCAGTTG
ATGTGTTGAAAAGGAAACGAAACAAATTGCTGGGCATAGCTGAAAGCGATGACGGCAATG
AAATCAATAATGCTCCCAGAAATCCACCATGGGTGCAGTGTTGCATTAAGTCGTATTACC
TTGTAAAGGGTGATGTTTGGGGCAGTAGGAGGTATCGAATCTTTGGCACCAGGCTGGTAA
CGTAAGAGTTTTATGACCATGGTTAGATGTGTAGCTTACCTTTTTTCCTTCTCTTTTTGT
TTTCCCCACAATGTACAAAGCAGTTCCACTGCATGTGTAAATTTTGTCCATGGACCCAAA
AAAAAAAAAACAATTTGTAGAATGATGAATTTGTCATCAAAGTGGTAGAAATAGGTTTTG
TT