Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g02260.t01
CDS Infomation

cds chromosome:12X:17:1900960:1903772:1 gene:VIT_17s0000g02260 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldose 1-epimerase [Source:UniProtKB/TrEMBL;Acc:D7SJC4]
Sequence

ATGCAGGTCAAGATCACCAACTATGGTGCCACCATCACTTCCTTGTCTGTACCAGACAAA
GATGGAAACTTGGCTGATGTTGTTCTTGGGTGCGATTCTCTGGAACCATATCTGAAAGGT
GATGTGCCCTATTTTGGGTGCATTGTTGGTAGAGTTGCAAATAGAATCAAAGATGGGAAG
TTTACTCTCAATGGGATTGAATACCAATTGCCCATCAACAAGCCCCCAAACAGTCTCCAC
GGTGGGCACAAGGGCTTTAGCAAGAAGGTCTGGGAGGTGGCTGAAAGGAAAGAAGGCAAA
ACCCCATCCATCACTTTCAAGTACCATAGTCACGACGGGGAAGAAGGTTACCCAGGAGAT
GTTTCCGTAACTGCAACTTACACTCTTACTTCGAGCACAACAATGAGGCTTGACATGGAA
GCTGTGCCTGAGAACAAGCCCACTCCAATCAACTTAGCTCAACACACATACTGGAACTTA
GCAGGCCACAGCTCCGGCAACATACTTGACCACTCCATTCAGATATGGGGATCTCATATC
ACTCCTGTGGATCAGAACACAGTCCCAACCGGTGAAATCACGCCAGTGAAAGCCACCCCA
TTTGATTTCACGACTGAGAAGAAGATTGGTACCTCAATCCATGAGGTTGGCCTAGGATAC
GACCACAACTATGCACTCGACTGCGGTGAGGAGAAAGAGGGCTTGAAACATGCTGCAAAG
GTGAAGGACCCATCAAGCTCAAGGGTCCTGAACTTGTGGACAACTGCTCCAGGCATGCAG
TTCTACACTGCAAACTATGTGAATGGAGTTGCTGGAAAAGATGGAGCTGTTTATGGAAAG
CATTCAGGGCTCTGCTTGGAGACACAGGGATACCCAAACGCCATTAACCAGCCAAACTTC
CCGTCCATCGTCGTCCAGCCAGGGGAGAAGTATCAACACACCATGTTGTTTGAGTTCTCC
GTTGAGTGA

Peptide Sequence

PEP ID

VIT_17s0000g02260.t01
PEP Infomation

pep chromosome:12X:17:1900960:1903772:1 gene:VIT_17s0000g02260 transcript:VIT_17s0000g02260.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldose 1-epimerase [Source:UniProtKB/TrEMBL;Acc:D7SJC4]
Sequence

MQVKITNYGATITSLSVPDKDGNLADVVLGCDSLEPYLKGDVPYFGCIVGRVANRIKDGK
FTLNGIEYQLPINKPPNSLHGGHKGFSKKVWEVAERKEGKTPSITFKYHSHDGEEGYPGD
VSVTATYTLTSSTTMRLDMEAVPENKPTPINLAQHTYWNLAGHSSGNILDHSIQIWGSHI
TPVDQNTVPTGEITPVKATPFDFTTEKKIGTSIHEVGLGYDHNYALDCGEEKEGLKHAAK
VKDPSSSRVLNLWTTAPGMQFYTANYVNGVAGKDGAVYGKHSGLCLETQGYPNAINQPNF
PSIVVQPGEKYQHTMLFEFSVE

Transcript Sequence

Transcript ID

VIT_17s0000g02260.t01
Transcript Infomation

cdna chromosome:12X:17:1900960:1903772:1 gene:VIT_17s0000g02260 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldose 1-epimerase [Source:UniProtKB/TrEMBL;Acc:D7SJC4]
Sequence

ACAATAAACTATACAAAGGAATCCAATTCTCTGCTACAACCTGACCAAACTCTAATAATT
TGCTTTGGTTCTACTCTCCTTTTCTGGTGTGTTGAGATCATCCATGGCTTCTGAGCGGAA
ACCAGAGATCTTTGAACTCAACAATGGGACCATGCAGGTCAAGATCACCAACTATGGTGC
CACCATCACTTCCTTGTCTGTACCAGACAAAGATGGAAACTTGGCTGATGTTGTTCTTGG
GTGCGATTCTCTGGAACCATATCTGAAAGGTGATGTGCCCTATTTTGGGTGCATTGTTGG
TAGAGTTGCAAATAGAATCAAAGATGGGAAGTTTACTCTCAATGGGATTGAATACCAATT
GCCCATCAACAAGCCCCCAAACAGTCTCCACGGTGGGCACAAGGGCTTTAGCAAGAAGGT
CTGGGAGGTGGCTGAAAGGAAAGAAGGCAAAACCCCATCCATCACTTTCAAGTACCATAG
TCACGACGGGGAAGAAGGTTACCCAGGAGATGTTTCCGTAACTGCAACTTACACTCTTAC
TTCGAGCACAACAATGAGGCTTGACATGGAAGCTGTGCCTGAGAACAAGCCCACTCCAAT
CAACTTAGCTCAACACACATACTGGAACTTAGCAGGCCACAGCTCCGGCAACATACTTGA
CCACTCCATTCAGATATGGGGATCTCATATCACTCCTGTGGATCAGAACACAGTCCCAAC
CGGTGAAATCACGCCAGTGAAAGCCACCCCATTTGATTTCACGACTGAGAAGAAGATTGG
TACCTCAATCCATGAGGTTGGCCTAGGATACGACCACAACTATGCACTCGACTGCGGTGA
GGAGAAAGAGGGCTTGAAACATGCTGCAAAGGTGAAGGACCCATCAAGCTCAAGGGTCCT
GAACTTGTGGACAACTGCTCCAGGCATGCAGTTCTACACTGCAAACTATGTGAATGGAGT
TGCTGGAAAAGATGGAGCTGTTTATGGAAAGCATTCAGGGCTCTGCTTGGAGACACAGGG
ATACCCAAACGCCATTAACCAGCCAAACTTCCCGTCCATCGTCGTCCAGCCAGGGGAGAA
GTATCAACACACCATGTTGTTTGAGTTCTCCGTTGAGTGAAGGAGCAGATATATTTGAGA
AAAGTCTGCTCTGTGTTTGGTTTTCAATGGCTGTGAGACCATGGAATCTGAATAACAATA
AGCTTAAATAATGAAATGATGAGAAATGAGTTTGGTAACA