Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g02130.t01
CDS Infomation

cds chromosome:12X:17:1721428:1726788:-1 gene:VIT_17s0000g02130 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATAAGCATGTCTTTTATAAGTTGTGTGACATCCTGCAAGCCAAGGGCCTTCTCCGC
CATACAAATCGAATCAAGATTGAGGAGCAACTAGCAATCTTCATGTTTATAATTGGCCAC
AATTTACGAACTCGAGCTGTTCAAGAGCTATTCCGGTATTCAGGGGAAACCATTAGTCGC
CACTTCAACAATGTCCTGAATGCAATTATGGCAATTTCATTAGACTTCTTTGAGCCTCCA
GTTTTGGATATTCCTCCAGAAATCCTAGAGGATGGCAGATTCTATCCCTATTTTCAGGAT
TGTGTGGGAGCGGTTGATGGTATACATATTCCAGTGATGGTGGGTGTAGACGAGCAGGGA
CCTTTCCGTAATAAGAGTGGATTTCTTTCACAAAATGTTCTGGCAGCCTGCTCACTGGAT
TTGAAGTTCCATTATATCCTCGCTGGCTGGGAAGGCTCAGCAGCAGATTTGCGAGTTCTA
AATTCAGCACTCACAAGGCGCAACAAACTGCAGATCCCTGAAGGTAAGTACTACCTTGTG
GACACCAAGTATGCAAACATGCCAGGATTCATTGCCCCATATCCTGGTGTCCCATATCAC
CTGAATGAATCCTCTGCTGGTTTTCATCCACAAGATGCCAAAGAGCTGTTCAATTATCGA
CACTTCCTCCTGCGAAGTGCAACAGATCGCATCTTTGGGGCCCTGAAGGCACGCTTCCCT
ATTCTGATGTCGGCTCCTCCATACCCATTACAGACACAGGTGAAGCTGGTTGTAGCGGCC
TGTGCCATACACAATTACATCCGGAGGGAGAAGCCTGATGACTGGCTGTTCAAGATATAT
GAACAGGAGACTGGGATACAAATGGAGGAATCATTCCCGGCACCAGAGATGGAACAGCCG
GTTGTGCATGTTGAGCCTCCTCCCCTGGAGATGGCCTTCGATGCAGACCAACTGGAAGTT
ACTTCCCGGTTGAGGGATACCATTGCAGCAGAGATGTGGGATGACTATATCCGTGATTTT
GGTGTGTAG

Peptide Sequence

PEP ID

VIT_17s0000g02130.t01
PEP Infomation

pep chromosome:12X:17:1721428:1726788:-1 gene:VIT_17s0000g02130 transcript:VIT_17s0000g02130.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDKHVFYKLCDILQAKGLLRHTNRIKIEEQLAIFMFIIGHNLRTRAVQELFRYSGETISR
HFNNVLNAIMAISLDFFEPPVLDIPPEILEDGRFYPYFQDCVGAVDGIHIPVMVGVDEQG
PFRNKSGFLSQNVLAACSLDLKFHYILAGWEGSAADLRVLNSALTRRNKLQIPEGKYYLV
DTKYANMPGFIAPYPGVPYHLNESSAGFHPQDAKELFNYRHFLLRSATDRIFGALKARFP
ILMSAPPYPLQTQVKLVVAACAIHNYIRREKPDDWLFKIYEQETGIQMEESFPAPEMEQP
VVHVEPPPLEMAFDADQLEVTSRLRDTIAAEMWDDYIRDFGV

Transcript Sequence

Transcript ID

VIT_17s0000g02130.t01
Transcript Infomation

cdna chromosome:12X:17:1721428:1726788:-1 gene:VIT_17s0000g02130 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGGACGATCTTGATTTACACGGAAGCATTCGATCATTTATTCTCCAAACGCTGCGTTTC
CATCGATTTCTGAGTTCAGGTTTGGGTGCAGATAGGGCTAGTTTTTCATGGAGAGCTCAG
ATGATGAAAAGGATGGTGTCCTTGAGGGTTACATACCAAAAGAGCTGAGCTATGGTTTAG
CTGCTAATGGTACAAAATTTGTAGATGAAGTACTTAATGGTCAAAATGAGAGTTGTTTGG
AGAATTTCCGTATGGATAAGCATGTCTTTTATAAGTTGTGTGACATCCTGCAAGCCAAGG
GCCTTCTCCGCCATACAAATCGAATCAAGATTGAGGAGCAACTAGCAATCTTCATGTTTA
TAATTGGCCACAATTTACGAACTCGAGCTGTTCAAGAGCTATTCCGGTATTCAGGGGAAA
CCATTAGTCGCCACTTCAACAATGTCCTGAATGCAATTATGGCAATTTCATTAGACTTCT
TTGAGCCTCCAGTTTTGGATATTCCTCCAGAAATCCTAGAGGATGGCAGATTCTATCCCT
ATTTTCAGGATTGTGTGGGAGCGGTTGATGGTATACATATTCCAGTGATGGTGGGTGTAG
ACGAGCAGGGACCTTTCCGTAATAAGAGTGGATTTCTTTCACAAAATGTTCTGGCAGCCT
GCTCACTGGATTTGAAGTTCCATTATATCCTCGCTGGCTGGGAAGGCTCAGCAGCAGATT
TGCGAGTTCTAAATTCAGCACTCACAAGGCGCAACAAACTGCAGATCCCTGAAGGTAAGT
ACTACCTTGTGGACACCAAGTATGCAAACATGCCAGGATTCATTGCCCCATATCCTGGTG
TCCCATATCACCTGAATGAATCCTCTGCTGGTTTTCATCCACAAGATGCCAAAGAGCTGT
TCAATTATCGACACTTCCTCCTGCGAAGTGCAACAGATCGCATCTTTGGGGCCCTGAAGG
CACGCTTCCCTATTCTGATGTCGGCTCCTCCATACCCATTACAGACACAGGTGAAGCTGG
TTGTAGCGGCCTGTGCCATACACAATTACATCCGGAGGGAGAAGCCTGATGACTGGCTGT
TCAAGATATATGAACAGGAGACTGGGATACAAATGGAGGAATCATTCCCGGCACCAGAGA
TGGAACAGCCGGTTGTGCATGTTGAGCCTCCTCCCCTGGAGATGGCCTTCGATGCAGACC
AACTGGAAGTTACTTCCCGGTTGAGGGATACCATTGCAGCAGAGATGTGGGATGACTATA
TCCGTGATTTTGGTGTGTAGTTAGTCCGCAGTTTCCAGGTGAGTTTGACATTTTTTTTTT
CGGTTTTCTTTTCCAAAGAGTAGCCATGATATGGGAGTTTTGATTTTGGGGACTGGACTT
GGAACTTGTTTATAGAAATGAAAATGAAATATAATAATGAAAATGTAGGACTCGTTTCGT
GTAGATCGTGTAGATATCATCCGCTTTGTTCAAAAAAATGTAGATGGTTTTTAGCGCCTC
TAAAACTCTGCATTTGTCTTGTTTCCTGGATTTGGGTGCCAGTGATGGGTGTTGATACTA
TTTCTAATGGTCTCCTCTCTCTACTTTTGATTAAATATAAATTTAATTTATCCACATTC