Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g01870.t01
CDS Infomation

cds chromosome:12X:17:1436683:1439286:1 gene:VIT_17s0000g01870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTAGGCTGCAGCAACAGCGATAATAACAACAACTCTTCTGCTGAGCCTTTTGCTAGC
TTGGAAAATGGAAGTAATAGTAAGAGGAAGCGGCGGCCGGCGGGGACTCCAGATCCAGAC
GCGGAGGTGGTGTCTCTTTCGCCCAAAACTCTATTGGAATCGGATCGATACATTTGTGAG
ATCTGCAACCAGGGGTTTCAGAGAGACCAGAACCTTCAGATGCACCGGCGACGCCATAAG
GTGCCATGGAAGCTGCTGAAGAGGGAGACGCCGGTGGTGAGGAAGCGGGTGTTTGTGTGC
CCGGAGCCCAGCTGCTTGCACCATGACCCCTGCCACGCACTGGGTGATCTGGTTGGAATC
AAGAAGCACTTCAGAAGAAAGCACAGTAATCACAAGCAGTGGGTCTGTGAGAAATGCAAC
AAGGGCTATGCTGTTCAATCGGATTACAAAGCCCACCTCAAAACCTGCGGCACCAGAGGC
CATTCTTGCGACTGCGGCCGTGTTTTCTCCAGAGTCGAGAGCTTCATTGAACATCAAGAT
GCTTGCAATATGGGTCACCTACGGCCGGAATCGCAGTTGCTGCAGCCGGCGGCGTGCTTG
TCTCGAACTGCCTCTAGCCCCAGCCCATCTAGTGAGACCAATTTCAGTGTACCTCCTTGG
TCTGGTTTGATGACGCCGAGGCCAGTGGATTCCATCTTCTTGACCTCTGATGGAGATAAT
AATAACAATAATCCTCCCAAGAAAGCACATTACCATAATCTGGAGCTTCAGCTGTTAACC
ACACCGAATCCCCTCGTCGCCTTGGCTTCCCCTAAAGCGGATGAAAACCATTCAACTCAG
TTGCAGCTGTCGATCGGGTCGAGCGATTTCAATGAGAAAAATGAATCAAGCATTATCAAT
CTGATCAACAAGGAATATTCGGCACCCGCAAGGTGTCCTAGGGAGTGCAATACCAGTGAG
AAAGCTACGTTTGGAGCGGCGAGGCTTAAGGAAGAGGCGCGCGAGCAGTTAAGGCTGGCC
ATGGAGGAGAAGGTCTATGCAGAAGAGGCAAGGCAGCAGGCAAAGCGACAGATTGAGCTA
GCCGATAAAGAATTTACCCATGCGAAGAGAATCAGGCAGCAGGCACAAGCGGAATTGGAC
AAGGCACAAGCACTAAAAGAACATGCCAGAAAGCAAATCAACTCAACTATCCTCCAAATC
ACTTGTCATGCCTGCAAGCAACAATTCCGAACGAGGACTGCAGGAAACGTCGCACCACCG
GATGAGAACTCCCTGGTACTTAGTTACATGTCATCTGCCATAACCGAGGGCGAAGTAGTA
GAGAACAATCATCATCGATCCGTTCGAGCTAAAACTACTAACCCATAG

Peptide Sequence

PEP ID

VIT_17s0000g01870.t01
PEP Infomation

pep chromosome:12X:17:1436683:1439286:1 gene:VIT_17s0000g01870 transcript:VIT_17s0000g01870.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLGCSNSDNNNNSSAEPFASLENGSNSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYICE
ICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGI
KKHFRRKHSNHKQWVCEKCNKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD
ACNMGHLRPESQLLQPAACLSRTASSPSPSSETNFSVPPWSGLMTPRPVDSIFLTSDGDN
NNNNPPKKAHYHNLELQLLTTPNPLVALASPKADENHSTQLQLSIGSSDFNEKNESSIIN
LINKEYSAPARCPRECNTSEKATFGAARLKEEAREQLRLAMEEKVYAEEARQQAKRQIEL
ADKEFTHAKRIRQQAQAELDKAQALKEHARKQINSTILQITCHACKQQFRTRTAGNVAPP
DENSLVLSYMSSAITEGEVVENNHHRSVRAKTTNP

Transcript Sequence

Transcript ID

VIT_17s0000g01870.t01
Transcript Infomation

cdna chromosome:12X:17:1436683:1439286:1 gene:VIT_17s0000g01870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTTAGAAGCAATGTGATTGGGTCAGACCCACAAGCTCTTCTCTTTCTCTCTGTGAAAGGA
GTTTATTAGGAGAAACTCTTTCTTACAACATTAGCTGACGAAGGTGAGAGCTGGAGGAAA
GAAAGAAGGAAAGAAAGCTGCCGAAAAGCTGAAAGTTTAAAGCCAAAAGAAAGCTGATAA
CCGAAAGAAAAGCGCTTTTATTATTTATTCATTTTCCCTCATGGTCTAGCTCTCTCTCAC
CCCCTTCCTCAATCTCTTTATCATTAGTTAAAAATCGATATCATATCTGGTGATTAGTGT
CACCGCCGTAGTTGATTCCGAATCAATACCCATAATCTCGAAAGAAAAGCAGGAGTTACT
CCATGTTAGGCTGCAGCAACAGCGATAATAACAACAACTCTTCTGCTGAGCCTTTTGCTA
GCTTGGAAAATGGAAGTAATAGTAAGAGGAAGCGGCGGCCGGCGGGGACTCCAGATCCAG
ACGCGGAGGTGGTGTCTCTTTCGCCCAAAACTCTATTGGAATCGGATCGATACATTTGTG
AGATCTGCAACCAGGGGTTTCAGAGAGACCAGAACCTTCAGATGCACCGGCGACGCCATA
AGGTGCCATGGAAGCTGCTGAAGAGGGAGACGCCGGTGGTGAGGAAGCGGGTGTTTGTGT
GCCCGGAGCCCAGCTGCTTGCACCATGACCCCTGCCACGCACTGGGTGATCTGGTTGGAA
TCAAGAAGCACTTCAGAAGAAAGCACAGTAATCACAAGCAGTGGGTCTGTGAGAAATGCA
ACAAGGGCTATGCTGTTCAATCGGATTACAAAGCCCACCTCAAAACCTGCGGCACCAGAG
GCCATTCTTGCGACTGCGGCCGTGTTTTCTCCAGAGTCGAGAGCTTCATTGAACATCAAG
ATGCTTGCAATATGGGTCACCTACGGCCGGAATCGCAGTTGCTGCAGCCGGCGGCGTGCT
TGTCTCGAACTGCCTCTAGCCCCAGCCCATCTAGTGAGACCAATTTCAGTGTACCTCCTT
GGTCTGGTTTGATGACGCCGAGGCCAGTGGATTCCATCTTCTTGACCTCTGATGGAGATA
ATAATAACAATAATCCTCCCAAGAAAGCACATTACCATAATCTGGAGCTTCAGCTGTTAA
CCACACCGAATCCCCTCGTCGCCTTGGCTTCCCCTAAAGCGGATGAAAACCATTCAACTC
AGTTGCAGCTGTCGATCGGGTCGAGCGATTTCAATGAGAAAAATGAATCAAGCATTATCA
ATCTGATCAACAAGGAATATTCGGCACCCGCAAGGTGTCCTAGGGAGTGCAATACCAGTG
AGAAAGCTACGTTTGGAGCGGCGAGGCTTAAGGAAGAGGCGCGCGAGCAGTTAAGGCTGG
CCATGGAGGAGAAGGTCTATGCAGAAGAGGCAAGGCAGCAGGCAAAGCGACAGATTGAGC
TAGCCGATAAAGAATTTACCCATGCGAAGAGAATCAGGCAGCAGGCACAAGCGGAATTGG
ACAAGGCACAAGCACTAAAAGAACATGCCAGAAAGCAAATCAACTCAACTATCCTCCAAA
TCACTTGTCATGCCTGCAAGCAACAATTCCGAACGAGGACTGCAGGAAACGTCGCACCAC
CGGATGAGAACTCCCTGGTACTTAGTTACATGTCATCTGCCATAACCGAGGGCGAAGTAG
TAGAGAACAATCATCATCGATCCGTTCGAGCTAAAACTACTAACCCATAGTTCTCTTCCA
CATCCATCTTCATGTTAATTTTAACCTTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTT
TCCTTTTCTTCTATATATTCATATACCAAGGGGTGTTGTGATTTTCTCCACTTAGAATCT
GATCAATGGAGGGCTTGTATTCTGTAATCTGTGTGATGTTATTTGTTCATTAATTTGGGA
AATGGAGAGTATGATCATCATGGATTATATATGTATCTTTTTTTGTAAGCTTCTATTCAA
TTTGTTCACTAATGGGGGCTGATCATGATCA