Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g01840.t01
CDS Infomation

cds chromosome:12X:17:1382394:1394515:1 gene:VIT_17s0000g01840 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGTTACTTTTACCGGATCTACTTCTATAGCTTCCGCTCCAGCGAAAATTGGACCG
ATTTTCAGGCAAATCGCTCATTTCCGTCGAGGACGGTCCCTGGTTTCCGCCGGACCTCGA
TCGGCTCAGTTCTGTCCAAGCGTAGGGTTTCAGTGTCGATGGAGCAATTCCTCTGCTTTG
CCTGCTGGTGTTAAAGCTCAGGTTGCAGCTGTTGAACAAGCAAGTGTTGATTCCACACAG
AATGTTGAAGCTCCTGTTGTTGTTATCACCGGTGCTTCTAGAGGAATTGGCAAAGCAATT
GCACTGGCTCTGGGCAAAGCGGGTTGTAAGGTCTTGGTGAACTATGCAAGGTCATCAAAG
GATGCTGAAGAAGTTTCCAAACAGATTGAGGAATTTGGTGGGCAAGCTCTTACTTTTGGG
GGTGATGTTTCCAAGGAGGAAGATGTAGAATCAATGATTAAAACCGTGGTTGATGCATGG
GGAACCATTGATATACTGATAAACAATGCAGGAATTACACGGGATGGCTTGATGATGAGA
ATGAAAAAACCCCAATGGCAGGAGGTTATTGATTTGAATCTCACAGGTGTATTTCTCTGC
ACACAGGCTGCATCCAAAATTATGATGAAAAAAAGAAAGGGAAGAATTATCAACATATCC
TCTGTTGTTGGCCTGGTTGGCAATGTTGGACAAGCCAATTACAGTGCTGCAAAGGCAGGG
GTAATTGGCTTAACAAAAAGTGTTGCAAAGGAATATGCAAGCAGGAATATTAATGTTAAT
GCCGTGGCTCCTGGATTCATAGCATCTGATATGACTGCCAAGCTTGGGGAAGACATTGAA
AAGAAAATCTTGGGTACCATTCCCCTAGGACGATATGGCCAACCTGAGGAAGTTGCTGGA
CTGGTAGAATTCTTAGCACTGAATCCTGCTGCCAGCTACATTACCGGACAGGTGTTTACC
ATTGATGGGGGGATGGTGATGTAG

Peptide Sequence

PEP ID

VIT_17s0000g01840.t01
PEP Infomation

pep chromosome:12X:17:1382394:1394515:1 gene:VIT_17s0000g01840 transcript:VIT_17s0000g01840.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAVTFTGSTSIASAPAKIGPIFRQIAHFRRGRSLVSAGPRSAQFCPSVGFQCRWSNSSAL
PAGVKAQVAAVEQASVDSTQNVEAPVVVITGASRGIGKAIALALGKAGCKVLVNYARSSK
DAEEVSKQIEEFGGQALTFGGDVSKEEDVESMIKTVVDAWGTIDILINNAGITRDGLMMR
MKKPQWQEVIDLNLTGVFLCTQAASKIMMKKRKGRIINISSVVGLVGNVGQANYSAAKAG
VIGLTKSVAKEYASRNINVNAVAPGFIASDMTAKLGEDIEKKILGTIPLGRYGQPEEVAG
LVEFLALNPAASYITGQVFTIDGGMVM

Transcript Sequence

Transcript ID

VIT_17s0000g01840.t01
Transcript Infomation

cdna chromosome:12X:17:1382394:1394515:1 gene:VIT_17s0000g01840 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGAACAAGTGTAACCTACTTCCAAACACCGGCTTAGCTTTCGCCGCTGCTCTCACTCTC
GCATCTCGATCGACCATAGGAGGCCTTCTCTGTCTGGCAACGTCTCTTGGCTCTCTCTCT
TCTTCCGTCGTCGCCGTGCGGACACTATCCACAGCTTCAATGGCTGTTACTTTTACCGGA
TCTACTTCTATAGCTTCCGCTCCAGCGAAAATTGGACCGATTTTCAGGCAAATCGCTCAT
TTCCGTCGAGGACGGTCCCTGGTTTCCGCCGGACCTCGATCGGCTCAGTTCTGTCCAAGC
GTAGGGTTTCAGTGTCGATGGAGCAATTCCTCTGCTTTGCCTGCTGGTGTTAAAGCTCAG
GTTGCAGCTGTTGAACAAGCAAGTGTTGATTCCACACAGAATGTTGAAGCTCCTGTTGTT
GTTATCACCGGTGCTTCTAGAGGAATTGGCAAAGCAATTGCACTGGCTCTGGGCAAAGCG
GGTTGTAAGGTCTTGGTGAACTATGCAAGGTCATCAAAGGATGCTGAAGAAGTTTCCAAA
CAGATTGAGGAATTTGGTGGGCAAGCTCTTACTTTTGGGGGTGATGTTTCCAAGGAGGAA
GATGTAGAATCAATGATTAAAACCGTGGTTGATGCATGGGGAACCATTGATATACTGATA
AACAATGCAGGAATTACACGGGATGGCTTGATGATGAGAATGAAAAAACCCCAATGGCAG
GAGGTTATTGATTTGAATCTCACAGGTGTATTTCTCTGCACACAGGCTGCATCCAAAATT
ATGATGAAAAAAAGAAAGGGAAGAATTATCAACATATCCTCTGTTGTTGGCCTGGTTGGC
AATGTTGGACAAGCCAATTACAGTGCTGCAAAGGCAGGGGTAATTGGCTTAACAAAAAGT
GTTGCAAAGGAATATGCAAGCAGGAATATTAATGTTAATGCCGTGGCTCCTGGATTCATA
GCATCTGATATGACTGCCAAGCTTGGGGAAGACATTGAAAAGAAAATCTTGGGTACCATT
CCCCTAGGACGATATGGCCAACCTGAGGAAGTTGCTGGACTGGTAGAATTCTTAGCACTG
AATCCTGCTGCCAGCTACATTACCGGACAGGTGTTTACCATTGATGGGGGGATGGTGATG
TAGGAGGCTTGAGAATCCTCCATCTTTTACTGTCTCCATCCTGAAAACTTGCTGGTCTTC
ATATCTGTGCCAGTCCAAGCTCCTTCTGTGGTTTTATAAGGTGCATAAACTTCACCTTGC
TGGAAATGCAGAGTGTCCATAAGGTTGTAGTCAGCTAGCAATCTTTAAGACTCAAGAATA
GGAAGATTTAGCCATTTTTGTTAATTTTGAGGCACTTCACTTTCTCTGGACCGTTGTAAG
CAAGAAAAATAACCAAAAATCTAAGGATAAAAAAAAGCGGACAGCGCTGCCTTCCTGGTT
ACCGACTAGGAAGTCTTACTTGTTTTATTGTTTAATGTAACTGCTAGTGGAGGCTCCGAA
ATGGTGGTCAATACCACGAGCGTCATACCCACTAAACTTAACGCATTTTTTCTTATAAAT
ATTTGGTAGATTAAGTGCATC