Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g01790.t01
CDS Infomation

cds chromosome:12X:17:1326644:1332527:1 gene:VIT_17s0000g01790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGAAATGAATGGGAACCACTGGATCGATCCGAAGAGCGGGTTCTCCCCTACAACC
AAGACCTACCATAGCCTCCGACCTCCGGTACCTTTTCCGCCGAAGCACCGCCCTCTTTCC
CTCGCCGAGTACGTCATCTCCCTCCTCCGCTCCGCCCCTGACTCACCGCTCGAAACCACC
AACGTTCTTATCGACGCTTCCTCCGACTACCGCCTCTCGTATTCTCAGTTCCTCCGGCAA
GTCCAATCCTTGGCCGCCTCTCTTCAGCGCATCACCGGCCTTTCCAAAGGCGATACTGCT
TTCATTCTCTGCCCTCCTTCTCTCAAAATCCCTGTTATCTACTTTTCTCTCCTCTCTCTC
GGCGTCACCATTTCTCCCACCAATCCGCTCGGCTCCGACTCCGAAGTTTCTCACCAGATT
CACCTCTGCAAACCTGCGATTGCATTCGCTTCTTCGAAAACTGCTCACAAGCTGCCGAGC
CTGCGGCTCGGCACGGTGCTTGTTGATTCGCTGGAGTTCGACTCTATGATGACAGAGAAT
GGAGCAGGTTATGGTAAACGAGTGGAGGTGAGTCAGTCTGACCCGGCCGCGATTCTCTAT
TCGTCCGGGACCACGGGACGAGTGAAGGGAGTGTTGTTGACCCACCGGAACCTGATCACG
CTTATCGCTGGATTCCACCATAACCGGCTAGAGAAAGAGGAGGATGGGCCGCGCCCAGTG
TCGCTGTTCACGCTGCCGCTATTTCACGTGTTCGGATTTTTCATGCTTGTGAGGGCAGTC
TCGTTGGCGGAGACCTTGGTTCTGATGGAGAGGTTTGATTTCGAGAATATGTTGAAGGCC
GTAGAGAAGTACCGAATCACGTATATGCCGGTGTCGCCGCCCCTTGTGGTGGCGCTCGCA
AAGTCGGAGTTCGTCGGCAAGTACGACCTTAGCTCGCTTCAGTTGCTTGGATCAGGCGGG
GCGCCGCTGGGAAAGGAGGTTTCCGAGCGGTTCTCCGCACGATTCCCCAATGTACAGATG
GTACAGGGATATGGTTTGACTGAAAGTGGGGGAGGGGCAGCAGGGATGGCAGACCTTGAT
GAGGCTAAGCGGCATGGATCTGTTGGTCGCCTAATGCATGATATGGAAGCCAAGATAGTT
GATCCTAAAACTGGAGAGGCCTTACCACCTGGCCAGCAAGGGGAGCTGTGGTTGCGCGGT
CCAACAATCATGAAAGGTTATGTAGGAGATGATGAGGCAACTGCTGCAACCTTGGATCAA
GAGGGCTGGTTAAAAACTGGCGATCTTTGTTACTTTGACTCTGATGGATTCCTATTCATT
GTTGATAGGTTAAAGGAATTGATCAAATACAAAGCATATCAGGTTCCTCCTGCTGAGTTG
GAACATTTACTGCAATCCAATCCAGAAATTGCTGATGCTGCTGTAATCCCGTATCCTGAT
GAAGAAGCAGGACAGATACCAATGGCCTTTGTGGTGAGAAAACCGGGAAGCAGCATCACT
GAGGCTCAAGTTATGGAATTCATTGCAAAACAGGTTGCACCATACAAGAAGATACGGCGC
GTAGCTTTTGTCAACTCCATTCCAAAATCTCCTGCAGGAAAGATCTTACGAAGAGAACTG
GTCAATCATGCGCTCTCTAAACCTAGACTATGA

Peptide Sequence

PEP ID

VIT_17s0000g01790.t01
PEP Infomation

pep chromosome:12X:17:1326644:1332527:1 gene:VIT_17s0000g01790 transcript:VIT_17s0000g01790.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAEMNGNHWIDPKSGFSPTTKTYHSLRPPVPFPPKHRPLSLAEYVISLLRSAPDSPLETT
NVLIDASSDYRLSYSQFLRQVQSLAASLQRITGLSKGDTAFILCPPSLKIPVIYFSLLSL
GVTISPTNPLGSDSEVSHQIHLCKPAIAFASSKTAHKLPSLRLGTVLVDSLEFDSMMTEN
GAGYGKRVEVSQSDPAAILYSSGTTGRVKGVLLTHRNLITLIAGFHHNRLEKEEDGPRPV
SLFTLPLFHVFGFFMLVRAVSLAETLVLMERFDFENMLKAVEKYRITYMPVSPPLVVALA
KSEFVGKYDLSSLQLLGSGGAPLGKEVSERFSARFPNVQMVQGYGLTESGGGAAGMADLD
EAKRHGSVGRLMHDMEAKIVDPKTGEALPPGQQGELWLRGPTIMKGYVGDDEATAATLDQ
EGWLKTGDLCYFDSDGFLFIVDRLKELIKYKAYQVPPAELEHLLQSNPEIADAAVIPYPD
EEAGQIPMAFVVRKPGSSITEAQVMEFIAKQVAPYKKIRRVAFVNSIPKSPAGKILRREL
VNHALSKPRL

Transcript Sequence

Transcript ID

VIT_17s0000g01790.t01
Transcript Infomation

cdna chromosome:12X:17:1326644:1332527:1 gene:VIT_17s0000g01790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCAGCCAAAATCAAAGAAAGCCTCAGGTCCCAGCTCTCATCAGTGATCTCGACTCTCTG
AGCGCCAGTGGCTTGCAATGGCGGAAATGAATGGGAACCACTGGATCGATCCGAAGAGCG
GGTTCTCCCCTACAACCAAGACCTACCATAGCCTCCGACCTCCGGTACCTTTTCCGCCGA
AGCACCGCCCTCTTTCCCTCGCCGAGTACGTCATCTCCCTCCTCCGCTCCGCCCCTGACT
CACCGCTCGAAACCACCAACGTTCTTATCGACGCTTCCTCCGACTACCGCCTCTCGTATT
CTCAGTTCCTCCGGCAAGTCCAATCCTTGGCCGCCTCTCTTCAGCGCATCACCGGCCTTT
CCAAAGGCGATACTGCTTTCATTCTCTGCCCTCCTTCTCTCAAAATCCCTGTTATCTACT
TTTCTCTCCTCTCTCTCGGCGTCACCATTTCTCCCACCAATCCGCTCGGCTCCGACTCCG
AAGTTTCTCACCAGATTCACCTCTGCAAACCTGCGATTGCATTCGCTTCTTCGAAAACTG
CTCACAAGCTGCCGAGCCTGCGGCTCGGCACGGTGCTTGTTGATTCGCTGGAGTTCGACT
CTATGATGACAGAGAATGGAGCAGGTTATGGTAAACGAGTGGAGGTGAGTCAGTCTGACC
CGGCCGCGATTCTCTATTCGTCCGGGACCACGGGACGAGTGAAGGGAGTGTTGTTGACCC
ACCGGAACCTGATCACGCTTATCGCTGGATTCCACCATAACCGGCTAGAGAAAGAGGAGG
ATGGGCCGCGCCCAGTGTCGCTGTTCACGCTGCCGCTATTTCACGTGTTCGGATTTTTCA
TGCTTGTGAGGGCAGTCTCGTTGGCGGAGACCTTGGTTCTGATGGAGAGGTTTGATTTCG
AGAATATGTTGAAGGCCGTAGAGAAGTACCGAATCACGTATATGCCGGTGTCGCCGCCCC
TTGTGGTGGCGCTCGCAAAGTCGGAGTTCGTCGGCAAGTACGACCTTAGCTCGCTTCAGT
TGCTTGGATCAGGCGGGGCGCCGCTGGGAAAGGAGGTTTCCGAGCGGTTCTCCGCACGAT
TCCCCAATGTACAGATGGTACAGGGATATGGTTTGACTGAAAGTGGGGGAGGGGCAGCAG
GGATGGCAGACCTTGATGAGGCTAAGCGGCATGGATCTGTTGGTCGCCTAATGCATGATA
TGGAAGCCAAGATAGTTGATCCTAAAACTGGAGAGGCCTTACCACCTGGCCAGCAAGGGG
AGCTGTGGTTGCGCGGTCCAACAATCATGAAAGGTTATGTAGGAGATGATGAGGCAACTG
CTGCAACCTTGGATCAAGAGGGCTGGTTAAAAACTGGCGATCTTTGTTACTTTGACTCTG
ATGGATTCCTATTCATTGTTGATAGGTTAAAGGAATTGATCAAATACAAAGCATATCAGG
TTCCTCCTGCTGAGTTGGAACATTTACTGCAATCCAATCCAGAAATTGCTGATGCTGCTG
TAATCCCGTATCCTGATGAAGAAGCAGGACAGATACCAATGGCCTTTGTGGTGAGAAAAC
CGGGAAGCAGCATCACTGAGGCTCAAGTTATGGAATTCATTGCAAAACAGGTTGCACCAT
ACAAGAAGATACGGCGCGTAGCTTTTGTCAACTCCATTCCAAAATCTCCTGCAGGAAAGA
TCTTACGAAGAGAACTGGTCAATCATGCGCTCTCTAAACCTAGACTATGATCCATTTATC
TATTCAATCAGAGTGGGAGCAAAGAGCAAGAAGTAAACATGCCCAAAATATTTTCATCTT
ACTCTGGCATGGAAGCCATCACCGGCATATTGAAATCACAACTGAACCAAATGGCCTCAA
AATAAAAATTTTCTATTTCCCAATATACCTGTCTGAGTTTCCTCACCCCAGGCCCTCATG
TAGCCTATAACCATAATACAGTTATTATAATTGTTTTGTATACTACCTATAGCTTTAGGA
AGTCGCGGAATTGTGTTGATTAAAACCATTTTCAGCTACGTGATTCATCAATTATCAACC
TTCTTGAGTTCTTTTAGTTTGATTCTTTGTCAGCTTTCAGGGTTTAATTCATTGATTTGA
GACACA