Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g01720.t01
CDS Infomation

cds chromosome:12X:17:1274842:1279215:1 gene:VIT_17s0000g01720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGCTTTATCTTCTCTACGAATCGGCTTCTGGGTACGCTCTATTTCTCGCTCATGGG
CTCGACGAAATCGGTCAGAACACCGAGGCGGTTCGGAGCTCCGTTTCGGATCTGAACCGA
TTCGGCAAGGTGGTAAAGCTGGCTGCTTTTCACCCGTTTGAATCCGCTCTCGATGCTCTG
AATCAATGCAACTCAGTGTCTGAAGGGCTTATGACTGATGAGTTGAGGAGTTTCTTGGAG
CTTAATCTTCCTAAAGTCAAGGAAGGTAAGAAGCCCAAGTTCAGTTTAGGAACTGCAGAA
CCTAAGATTGGATCGCATATCTTTGAAGATACTAAAATTCCTTGCCAAAGCAATGAGTTT
GTTCTTGAGCTTCTCCGTGGTGTGCGGTTGCATTTTGATAGGTTTATTAAGGATCTCAAG
CCTGGAGACCTAGAAAAGGCCCAACTTGGTCTGGGACACAGTTACAGCAGAGCAAAGGTG
AAGTTCAATGTGAACAGAGTCGATAATATGGTCATTCAGGCCATCTTCCTTCTCGATACT
CTTGATAAAGATATCAATTCCTTCTCCATGAGAGTCAGGGAATGGTACTCTTGGCATTTC
CCTGAGTTGGTGAAGATAGTGAATGACAACTATCTCTATGCCAAAGTTGCAAAATTTGTT
GAGAACAAGTTGGAGTTGTCTGAAGACAAAATTCCAGGCTTAACTGAGATCCTTGGAGAT
GAAGATAAAGCAAAGGAGATTGTGGAAGCTGCCAAAGCATCCATGGGACAGGATTTGTCC
CCAATTGACTTGATTAATGTCCAGCAATTTGCGCAGAGGGTAATGGACCTCTCTGAGTAC
AGGAAGAAGCTGTATGAATATCTGGTTACTAAAATGAACGACATTGCACCCAATTTGGCT
TCTCTAATTGGTGAAGTTGTTGGGGCACGGTTGATTTCTCATGCAGGTAGTCTCACTAAT
CTTGCAAAATGCCCTTCCTCCACTCTTCAGATCCTTGGTGCTGAAAAGGCTCTATTCAGG
GCATTGAAAACAAGAGGGAACACGCCAAAATATGGTCTAATCTTCCATTCTTCTTTTATT
GGTCGTGCATCTGCCCGGAACAAGGGACGTATGGCTCGTTATCTTGCAAACAAGTGTTCC
ATTGCTTCTCGTATTGACTGTTTTGCTGAGAGTAACACCACGGTTTTTGGGGAGAAACTC
CGTGAACAAGTTGAGGAGCGACTCGAATTTTATGACAAGGGAATTGCACCTCGGAAAAAC
ATTGATGTTATGAAAGCTGCCATTGAAATTACTCAAAACAATGACACGGAGGACAAAGCA
ACCACTGAGCCTTCAGCAAAGAAAAGCAAGAAAAAGAAGTCTAAAGTCGAGGCTGCAGAG
GATGGTGAGCCCATGGTTGAGGATAAACCAACTGCTGCTACAAATGGAGATGCTTCTGAG
GAACCCAAAACTGAGAAGAAGAAAAAGAAGGAGAAGCGAAAGTTGGTAGAAGAAGAAGAA
GAAGAGCAGGTTCAGGCTGTGGAGAATTCAATTGGTGTGAACGGGGTTAACACAGAGGAT
GGAACAGCAAAGAAGAAGAAAAAGAAGAAGAGCAAGGATGAGGATGGAGAGCGTCTTGCA
GCTGTCAGTGAAGGTAAGAAGAAAAAGAAGAAATCAAGAAGCGAAGACGATGATTAA

Peptide Sequence

PEP ID

VIT_17s0000g01720.t01
PEP Infomation

pep chromosome:12X:17:1274842:1279215:1 gene:VIT_17s0000g01720 transcript:VIT_17s0000g01720.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALYLLYESASGYALFLAHGLDEIGQNTEAVRSSVSDLNRFGKVVKLAAFHPFESALDAL
NQCNSVSEGLMTDELRSFLELNLPKVKEGKKPKFSLGTAEPKIGSHIFEDTKIPCQSNEF
VLELLRGVRLHFDRFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDT
LDKDINSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKFVENKLELSEDKIPGLTEILGD
EDKAKEIVEAAKASMGQDLSPIDLINVQQFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLA
SLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFI
GRASARNKGRMARYLANKCSIASRIDCFAESNTTVFGEKLREQVEERLEFYDKGIAPRKN
IDVMKAAIEITQNNDTEDKATTEPSAKKSKKKKSKVEAAEDGEPMVEDKPTAATNGDASE
EPKTEKKKKKEKRKLVEEEEEEQVQAVENSIGVNGVNTEDGTAKKKKKKKSKDEDGERLA
AVSEGKKKKKKSRSEDDD

Transcript Sequence

Transcript ID

VIT_17s0000g01720.t01
Transcript Infomation

cdna chromosome:12X:17:1274842:1279215:1 gene:VIT_17s0000g01720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCCGATACATATATGAAGGTTTTAGGGGGACAAAAGCTTTGAGTCTCTCCGTGCCAGCTA
TCAATGGCGCTTTATCTTCTCTACGAATCGGCTTCTGGGTACGCTCTATTTCTCGCTCAT
GGGCTCGACGAAATCGGTCAGAACACCGAGGCGGTTCGGAGCTCCGTTTCGGATCTGAAC
CGATTCGGCAAGGTGGTAAAGCTGGCTGCTTTTCACCCGTTTGAATCCGCTCTCGATGCT
CTGAATCAATGCAACTCAGTGTCTGAAGGGCTTATGACTGATGAGTTGAGGAGTTTCTTG
GAGCTTAATCTTCCTAAAGTCAAGGAAGGTAAGAAGCCCAAGTTCAGTTTAGGAACTGCA
GAACCTAAGATTGGATCGCATATCTTTGAAGATACTAAAATTCCTTGCCAAAGCAATGAG
TTTGTTCTTGAGCTTCTCCGTGGTGTGCGGTTGCATTTTGATAGGTTTATTAAGGATCTC
AAGCCTGGAGACCTAGAAAAGGCCCAACTTGGTCTGGGACACAGTTACAGCAGAGCAAAG
GTGAAGTTCAATGTGAACAGAGTCGATAATATGGTCATTCAGGCCATCTTCCTTCTCGAT
ACTCTTGATAAAGATATCAATTCCTTCTCCATGAGAGTCAGGGAATGGTACTCTTGGCAT
TTCCCTGAGTTGGTGAAGATAGTGAATGACAACTATCTCTATGCCAAAGTTGCAAAATTT
GTTGAGAACAAGTTGGAGTTGTCTGAAGACAAAATTCCAGGCTTAACTGAGATCCTTGGA
GATGAAGATAAAGCAAAGGAGATTGTGGAAGCTGCCAAAGCATCCATGGGACAGGATTTG
TCCCCAATTGACTTGATTAATGTCCAGCAATTTGCGCAGAGGGTAATGGACCTCTCTGAG
TACAGGAAGAAGCTGTATGAATATCTGGTTACTAAAATGAACGACATTGCACCCAATTTG
GCTTCTCTAATTGGTGAAGTTGTTGGGGCACGGTTGATTTCTCATGCAGGTAGTCTCACT
AATCTTGCAAAATGCCCTTCCTCCACTCTTCAGATCCTTGGTGCTGAAAAGGCTCTATTC
AGGGCATTGAAAACAAGAGGGAACACGCCAAAATATGGTCTAATCTTCCATTCTTCTTTT
ATTGGTCGTGCATCTGCCCGGAACAAGGGACGTATGGCTCGTTATCTTGCAAACAAGTGT
TCCATTGCTTCTCGTATTGACTGTTTTGCTGAGAGTAACACCACGGTTTTTGGGGAGAAA
CTCCGTGAACAAGTTGAGGAGCGACTCGAATTTTATGACAAGGGAATTGCACCTCGGAAA
AACATTGATGTTATGAAAGCTGCCATTGAAATTACTCAAAACAATGACACGGAGGACAAA
GCAACCACTGAGCCTTCAGCAAAGAAAAGCAAGAAAAAGAAGTCTAAAGTCGAGGCTGCA
GAGGATGGTGAGCCCATGGTTGAGGATAAACCAACTGCTGCTACAAATGGAGATGCTTCT
GAGGAACCCAAAACTGAGAAGAAGAAAAAGAAGGAGAAGCGAAAGTTGGTAGAAGAAGAA
GAAGAAGAGCAGGTTCAGGCTGTGGAGAATTCAATTGGTGTGAACGGGGTTAACACAGAG
GATGGAACAGCAAAGAAGAAGAAAAAGAAGAAGAGCAAGGATGAGGATGGAGAGCGTCTT
GCAGCTGTCAGTGAAGGTAAGAAGAAAAAGAAGAAATCAAGAAGCGAAGACGATGATTAA
ATTTTGATCGAGTAGTCTAAAATTCTGGTAGATATCTATCTGGGCTGCAGTTGTTGCATA
AGTTTGA