Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g01330.t01
CDS Infomation

cds chromosome:12X:17:944026:945738:-1 gene:VIT_17s0000g01330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGAGGAACACTGAAGAACAGATTGTTTCGCATGTGGGTTCTAAGGCTACAATGGAT
GATGAACTTAAAGAATCCTCTTTCACTTCTATGCCTAAATCACCTTTACAAAATAGCAAA
GCAAGCAGTATGGTAGTCAAGAAAGCACATACTGTGATTCCTGCTCACATAGTTGCGGAA
GCCATATCAACGCTCCATGGTCTTGACCTCAGATGGTCAGGTCCAATCACGCCGACTGAG
ATGCAGTATGTTGAGCAGTATGTCTTTGCCAAGTACCCACAATACGCCAATGGATTGGTT
GAGGAAGGAGAAATGATCGATCTCTCCACTCTTTGCATCAATGAGGAGTCTTCAGATCCA
ACACCTGACGATAGGAGGAAGTCCCCTAGAGGCAGTTTCAGAGAGTCCACACCTTCCTTT
GGTAGCAATCTCCCTGATCTAGACAGAACCCAGTTGGAGGCATCAAGACTGCTTGATATC
CTCACCAAGAAATCCTCCTTTCCTGGCAGTTTCATCTCAATCCCAGAAATCCAAGCTCAA
AACAAAGTTCTAAAGCACTGTGGTCTGTCTGACAATGAGTACCTAGTCCTCTTCACGTCT
AACTACAAGGAAGCGATGATGATGGTGGGAGAGAGCTATCCTTTCTTCAGGGGAAACTTC
TACATGACGATTCTTGGGGAAGAAGAGGATTACATAAAGGAATTCGCAAGTTACAAGGAC
TCAAAAGTGATCTCAGCACCAGAGACTTGGCTGGACTTGAGGATCAAGGGATCGCAGCTT
AGCCAGTACTTCAGAAGGAAGTGTAAGCACAGTCCCAAGGGACTCTTCTGTTACCCTGCG
GATGTGAATGGTACACGATACTCAATGCACTGGGTTTCAGAAGCTCACCGGAACTCATGG
CATGTTCTGCTTGATGCCACTGCGCTGGTTGTGGGGGAGGATAGGTTGAACCTTGCACTG
CACCGGCCGGACTTTGTATTGTGCAGTCTGGACAACACACACGCTCATCCTTCAAGGATC
ACTTGCCTCTTGGTCAGGAGGAAATCCTTTGATACATCAACAGCTTCAGCTCAGATCCAT
GAGTGA

Peptide Sequence

PEP ID

VIT_17s0000g01330.t01
PEP Infomation

pep chromosome:12X:17:944026:945738:-1 gene:VIT_17s0000g01330 transcript:VIT_17s0000g01330.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGRNTEEQIVSHVGSKATMDDELKESSFTSMPKSPLQNSKASSMVVKKAHTVIPAHIVAE
AISTLHGLDLRWSGPITPTEMQYVEQYVFAKYPQYANGLVEEGEMIDLSTLCINEESSDP
TPDDRRKSPRGSFRESTPSFGSNLPDLDRTQLEASRLLDILTKKSSFPGSFISIPEIQAQ
NKVLKHCGLSDNEYLVLFTSNYKEAMMMVGESYPFFRGNFYMTILGEEEDYIKEFASYKD
SKVISAPETWLDLRIKGSQLSQYFRRKCKHSPKGLFCYPADVNGTRYSMHWVSEAHRNSW
HVLLDATALVVGEDRLNLALHRPDFVLCSLDNTHAHPSRITCLLVRRKSFDTSTASAQIH
E

Transcript Sequence

Transcript ID

VIT_17s0000g01330.t01
Transcript Infomation

cdna chromosome:12X:17:944026:945738:-1 gene:VIT_17s0000g01330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAGGTTTTGGTGAGGTTGGCTTGGTCTTCTCTTCGCCCCTGCCTATGTTTCCTCCTCCA
TTCCTTTGCTTTCTTCCTCGTCCTAGCAGCTTCTATAAATTTATTTAGACCCCGAATTCA
GATTTTTTCTATAACAAAAGGCTCTTGAGGGTTTAGTGCTCTTCTTATCTTCCTTTCCTC
TCCATTCTTCTGTTGTCCTTCATCTTCCCTTCAAACTCTTTTAGTTCCTCTGAGCATACA
AGCTCACCTCTACAGAAAGAGAGGTTTAGAGGGTTGCTTTGGCTGCCTCTGTTTTTTCTC
CTACTTTTTGTCTGTTCTCTTAACTCTTTCTTCGTTATTGGTCCATGATCCAATTGCTCT
ATGTTTTTGAGGGGCAAAAACTATAGGCATCATGGGGAGGAACACTGAAGAACAGATTGT
TTCGCATGTGGGTTCTAAGGCTACAATGGATGATGAACTTAAAGAATCCTCTTTCACTTC
TATGCCTAAATCACCTTTACAAAATAGCAAAGCAAGCAGTATGGTAGTCAAGAAAGCACA
TACTGTGATTCCTGCTCACATAGTTGCGGAAGCCATATCAACGCTCCATGGTCTTGACCT
CAGATGGTCAGGTCCAATCACGCCGACTGAGATGCAGTATGTTGAGCAGTATGTCTTTGC
CAAGTACCCACAATACGCCAATGGATTGGTTGAGGAAGGAGAAATGATCGATCTCTCCAC
TCTTTGCATCAATGAGGAGTCTTCAGATCCAACACCTGACGATAGGAGGAAGTCCCCTAG
AGGCAGTTTCAGAGAGTCCACACCTTCCTTTGGTAGCAATCTCCCTGATCTAGACAGAAC
CCAGTTGGAGGCATCAAGACTGCTTGATATCCTCACCAAGAAATCCTCCTTTCCTGGCAG
TTTCATCTCAATCCCAGAAATCCAAGCTCAAAACAAAGTTCTAAAGCACTGTGGTCTGTC
TGACAATGAGTACCTAGTCCTCTTCACGTCTAACTACAAGGAAGCGATGATGATGGTGGG
AGAGAGCTATCCTTTCTTCAGGGGAAACTTCTACATGACGATTCTTGGGGAAGAAGAGGA
TTACATAAAGGAATTCGCAAGTTACAAGGACTCAAAAGTGATCTCAGCACCAGAGACTTG
GCTGGACTTGAGGATCAAGGGATCGCAGCTTAGCCAGTACTTCAGAAGGAAGTGTAAGCA
CAGTCCCAAGGGACTCTTCTGTTACCCTGCGGATGTGAATGGTACACGATACTCAATGCA
CTGGGTTTCAGAAGCTCACCGGAACTCATGGCATGTTCTGCTTGATGCCACTGCGCTGGT
TGTGGGGGAGGATAGGTTGAACCTTGCACTGCACCGGCCGGACTTTGTATTGTGCAGTCT
GGACAACACACACGCTCATCCTTCAAGGATCACTTGCCTCTTGGTCAGGAGGAAATCCTT
TGATACATCAACAGCTTCAGCTCAGATCCATGAGTGACAGGGAA