Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g01290.t01
CDS Infomation

cds chromosome:12X:17:928709:931440:-1 gene:VIT_17s0000g01290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCACAACCGGCGATTCCAGTGACACCGGCGTTGAAGGACGATCTGGACATAGTGATT
CCCACCATCAGGAACCTGGATTTCTTGGAGATGTGGAGGCCATTTTTCCAGCCATACCAT
CTGATAATCGTACAGGACGGAGATCCGACGAAGACGATTCGGGTTCCGGAGGGGTTCGAC
TACGAGCTCTACAACCGGAACGACGTGAATCGGATCCTGGGACCCAAGGCAAGCTGTATC
TCCTTCAAGGACTCCGCTTGTCGCTGCTTCGGCTTCCTCGTTTCCAAGAAGAAGTACATC
TTCACCATTGATGATGACTGCTTTGTGGCTAAGGATCCGAGTGGGAAGGAGATAAATGCA
TTGGCGCAGCACATACAGAACTTGCTGACACCGTCGACTCCCTTCTTCTTCAACACCCTG
TATGATCCTTTCAGGGAAGGAGCTGATTTTGTTCGGGGATACCCATTTAGCTTGAGGGAA
GGAGCCCCAACTGCTATATCTCATGGGCTGTGGCTCAACATCCCTGATTATGATGCCCCA
ACTCAGCTTGTCAAGCCTCTCGAGCGCAACACCAGGTATGTGGATGCTGTTATGACCATC
CCAAAAGGAACTCTATTTCCAATGTGTGGCATGAACCTTGGATTCGACCGGGAACTCATA
GGTCCTGCTATGTACTTTGGGCTTATGGGTGATGGCCAACCAATTGGCAGATACGACGAT
ATGTGGGCTGGATGGTGTGCGAAGGTGATCTGTGACCATATGAGTCTTGGTGTGAAAACT
GGGCTGCCATACATTTGGCACAGTAAGGCGAGCAACCCATTTGTCAATTTGAAGAAAGAA
TACAAAGGAATATACTGGCAAGAAGACATCATCCCATTCTTCCAATCTGTTGTCTTCCCA
AAAGAATGCATAACTGTGCAGCAATGCTACATTGAGCTTTCTAAGCAGGTCAAGGAGAAG
CTGGGGCATGTTGATCCTTACTTCCAGAAACTCGCAGATTCCATGGTTACGTGGATTGAA
GCCTGGGAGGAGCTAAACCCTCCAACAAAAGCAGCACCTGCAGCTCAGCCCAATGGTGTT
AAGAAGGATGCACCGGCTCCCAAACCCAAGTAG

Peptide Sequence

PEP ID

VIT_17s0000g01290.t01
PEP Infomation

pep chromosome:12X:17:928709:931440:-1 gene:VIT_17s0000g01290 transcript:VIT_17s0000g01290.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAQPAIPVTPALKDDLDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKTIRVPEGFD
YELYNRNDVNRILGPKASCISFKDSACRCFGFLVSKKKYIFTIDDDCFVAKDPSGKEINA
LAQHIQNLLTPSTPFFFNTLYDPFREGADFVRGYPFSLREGAPTAISHGLWLNIPDYDAP
TQLVKPLERNTRYVDAVMTIPKGTLFPMCGMNLGFDRELIGPAMYFGLMGDGQPIGRYDD
MWAGWCAKVICDHMSLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEDIIPFFQSVVFP
KECITVQQCYIELSKQVKEKLGHVDPYFQKLADSMVTWIEAWEELNPPTKAAPAAQPNGV
KKDAPAPKPK

Transcript Sequence

Transcript ID

VIT_17s0000g01290.t01
Transcript Infomation

cdna chromosome:12X:17:928709:931440:-1 gene:VIT_17s0000g01290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CATGGCACAACCGGCGATTCCAGTGACACCGGCGTTGAAGGACGATCTGGACATAGTGAT
TCCCACCATCAGGAACCTGGATTTCTTGGAGATGTGGAGGCCATTTTTCCAGCCATACCA
TCTGATAATCGTACAGGACGGAGATCCGACGAAGACGATTCGGGTTCCGGAGGGGTTCGA
CTACGAGCTCTACAACCGGAACGACGTGAATCGGATCCTGGGACCCAAGGCAAGCTGTAT
CTCCTTCAAGGACTCCGCTTGTCGCTGCTTCGGCTTCCTCGTTTCCAAGAAGAAGTACAT
CTTCACCATTGATGATGACTGCTTTGTGGCTAAGGATCCGAGTGGGAAGGAGATAAATGC
ATTGGCGCAGCACATACAGAACTTGCTGACACCGTCGACTCCCTTCTTCTTCAACACCCT
GTATGATCCTTTCAGGGAAGGAGCTGATTTTGTTCGGGGATACCCATTTAGCTTGAGGGA
AGGAGCCCCAACTGCTATATCTCATGGGCTGTGGCTCAACATCCCTGATTATGATGCCCC
AACTCAGCTTGTCAAGCCTCTCGAGCGCAACACCAGGTATGTGGATGCTGTTATGACCAT
CCCAAAAGGAACTCTATTTCCAATGTGTGGCATGAACCTTGGATTCGACCGGGAACTCAT
AGGTCCTGCTATGTACTTTGGGCTTATGGGTGATGGCCAACCAATTGGCAGATACGACGA
TATGTGGGCTGGATGGTGTGCGAAGGTGATCTGTGACCATATGAGTCTTGGTGTGAAAAC
TGGGCTGCCATACATTTGGCACAGTAAGGCGAGCAACCCATTTGTCAATTTGAAGAAAGA
ATACAAAGGAATATACTGGCAAGAAGACATCATCCCATTCTTCCAATCTGTTGTCTTCCC
AAAAGAATGCATAACTGTGCAGCAATGCTACATTGAGCTTTCTAAGCAGGTCAAGGAGAA
GCTGGGGCATGTTGATCCTTACTTCCAGAAACTCGCAGATTCCATGGTTACGTGGATTGA
AGCCTGGGAGGAGCTAAACCCTCCAACAAAAGCAGCACCTGCAGCTCAGCCCAATGGTGT
TAAGAAGGATGCACCGGCTCCCAAACCCAAGTAGACAGCCTTCAATTTATGTTTCACTGT
ACTAGTTGAATTTTGCTTTCCTTAGGTTCTTATTGACTCCAGTTCTCAATTGCTTTATGT
CTTGGCTTAATTCTATAGCTTCTGTGCCCCCTGTGCTTCTGTTTCTGAGTTTAATGGACT
TTCCATGCTTTTATCATAATAAAGATCTGATGATTGTTATAGA