Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g01240.t01
CDS Infomation

cds chromosome:12X:17:885283:891436:1 gene:VIT_17s0000g01240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGAGTCTGCTTCGAGTTTGCAGAAAAGCCCTAACCTCCACGGCCACGGCTCAGCCG
CTTCTCTGGAGGGGATACGCAGTCGAATCCGCGGCAGCGATACGAGAATCTCCGGATCGA
GTGAAATGGGACTACAGAGGACAGAGAAGGATAATTCCGCTGGGGCAGTGGCTCCCGAAG
ATCGCCGTCGACGCCTATGTGGCTCCCAACGTCGTTCTCGCCGGCCAGGTCACCGTAGGG
GACGGATCGTCCGTTTGGAACGGCTCCGTTCTTCGCGGCGATCTCAACAAGATCACCATT
GGGTTTTGCTGTAATATTCAGGAGAGGTGTGTTATCCACGCTGCTTGGAATTCTCCTACA
GGATTACCAGCACACACATTCATCGAGAGGTATGTGACAGTTGGTGCATCCAGTCTGTTG
CGGTCTTGCACGATCGAACCTGAGTGCATTGTTGGGCAACACTCCATCCTTATGGAAGGT
TCTTTGATGGAGACCCACTCTATCCTTGAAGCTGGATCTGTTCTTCCCCCAGGAAGAAGA
ATACCAACGGGTGAACTATGGGCTGGGAACCCAGCAAGGTTTGTCCGAACTCTGACCCAT
GAAGAGACCCTAGAGATCCCTAAACTTGCTGTCGCTATCAATGACCTGAGCACAAGCCAT
TTCTCAGAGTTCCTCCCTTACTCAACAGCATACCTGGAGGTCGAGAAGCTGAAGAAGTCC
TTTGGGATTTCAATTTGA

Peptide Sequence

PEP ID

VIT_17s0000g01240.t01
PEP Infomation

pep chromosome:12X:17:885283:891436:1 gene:VIT_17s0000g01240 transcript:VIT_17s0000g01240.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASLLRVCRKALTSTATAQPLLWRGYAVESAAAIRESPDRVKWDYRGQRRIIPLGQWLPK
IAVDAYVAPNVVLAGQVTVGDGSSVWNGSVLRGDLNKITIGFCCNIQERCVIHAAWNSPT
GLPAHTFIERYVTVGASSLLRSCTIEPECIVGQHSILMEGSLMETHSILEAGSVLPPGRR
IPTGELWAGNPARFVRTLTHEETLEIPKLAVAINDLSTSHFSEFLPYSTAYLEVEKLKKS
FGISI

Transcript Sequence

Transcript ID

VIT_17s0000g01240.t01
Transcript Infomation

cdna chromosome:12X:17:885283:891436:1 gene:VIT_17s0000g01240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGGCTGAGAGCCTGAGAGAGAGAGGAGAGAAATGGCGAGTCTGCTTCGAGTTTGCAGAAA
AGCCCTAACCTCCACGGCCACGGCTCAGCCGCTTCTCTGGAGGGGATACGCAGTCGAATC
CGCGGCAGCGATACGAGAATCTCCGGATCGAGTGAAATGGGACTACAGAGGACAGAGAAG
GATAATTCCGCTGGGGCAGTGGCTCCCGAAGATCGCCGTCGACGCCTATGTGGCTCCCAA
CGTCGTTCTCGCCGGCCAGGTCACCGTAGGGGACGGATCGTCCGTTTGGAACGGCTCCGT
TCTTCGCGGCGATCTCAACAAGATCACCATTGGGTTTTGCTGTAATATTCAGGAGAGGTG
TGTTATCCACGCTGCTTGGAATTCTCCTACAGGATTACCAGCACACACATTCATCGAGAG
GTATGTGACAGTTGGTGCATCCAGTCTGTTGCGGTCTTGCACGATCGAACCTGAGTGCAT
TGTTGGGCAACACTCCATCCTTATGGAAGGTTCTTTGATGGAGACCCACTCTATCCTTGA
AGCTGGATCTGTTCTTCCCCCAGGAAGAAGAATACCAACGGGTGAACTATGGGCTGGGAA
CCCAGCAAGGTTTGTCCGAACTCTGACCCATGAAGAGACCCTAGAGATCCCTAAACTTGC
TGTCGCTATCAATGACCTGAGCACAAGCCATTTCTCAGAGTTCCTCCCTTACTCAACAGC
ATACCTGGAGGTCGAGAAGCTGAAGAAGTCCTTTGGGATTTCAATTTGATGATCTTTGAT
ACCATGCTCTGTATCTTTTAGTTTGTTTTTGTTCTCCTTAAAGGGAAATAATCAAAGTCT
CCAAAGACTAGTAAAAAGCTTTGGTGGTCCTTGTCTTTTTATTTGATTTTGAAGCCCAGC
AGAAGAACTGGATTATACTGGTGTCTAGCGAGACTCAAGAAATTTGCAGAGTGATTTGTA
TTGAAGCTCTATTGAGGCTCTGAATGCTGATAATGTTAATTT