Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g01200.t01
CDS Infomation

cds chromosome:12X:17:851263:859898:-1 gene:VIT_17s0000g01200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTAGTCACGGCGGTTCATCCAGGAAAAGTTTGACTTTGTCCATGCCATCGCAGGGA
AAGAAAAAAGCTTCTGAGAATGGAGCTGGCCCCGATAGCGCTCGAAAATCTCTTGCCTCT
GCTCGTTCCATGGGACTGACTGGAGAGCGTACAGTGAAGAGATTGCGACTGTCAAGGGCC
CTGACAGTTCCTGACACCACAAGTATTTATGAAGCTTGCCGCCGTATGGCTGCTCGTAGA
GTTGATGCCTTATTGTTAACTGATTCAAATGCGTTACTTTGTGGAATCCTTACAGACAAG
GACATAGCAACAAGAGTCATTGCTCGTGAACTTAATCTTGAGGAAACACCAGTCTCCAAA
GTTATGACAAGGAACCCAATTTTTGTTCTTTCTGATACTCTTGCTGTGGAAGCCCTGCAA
AAGATGGTGCAAGGAAAGTTCAGACATTTGCCTGTTGTAGAGAATGGGGAGGTCATTGCT
TTACTAGACATAGCAAAGTGTTTATATGATGCTATTGCTCGAATGGAGAGGGCAGCTGAA
AAGGGAAAAGCCATTGCTGCTGCTGTTGAAGGAGTTGAAAAAAATTGGGGGACATCTCTC
TCTGGTCCTAGCACATTCATTGAGACACTTCGAGAGAGGATGTTTAGGCCTGCTTTGTCC
ACGATCATCCCCGAGAATTCAAAGGTTGTAACAGTCTCACCAACTGACACAGTTCTAACA
GCAGCAAAGAAGATGCTTGAACTTAAATTAAGTTGTGCAGTCGTAGCAGTTGAAAACAGA
CCAAAGGGGATTCTAACTTCAAAGGATATCCTGATGCGGGTCATAGCACAAAATCTTCAT
CCAGAATCCACTCCAGTGGAGAAGGTCATGACTCCAAATCCAGAATGTGCAACAATTGAT
ACACCCATTGTTGATGCCCTACATACCATGCATGATGGGAAATTTTTACACCTTCCTGTC
ATTGATAGAGATGGTGGTGTAGTTGCTGTTGCTGATGTAATCCATATCACTCATGCAGCT
GTGGCTACAGTGGGAGGCAATGCTGGAGTTAATAATGAGGCTGCAAGCAGTCTGATGCAG
AAGTTCTGGGACTCAGCCATGGCATTAGGAACTGATGATGACGAAGAAACACGGAGTGAG
GGTTCCTTGAAATTGGCTTCTGAAGGAACTGAAATAGGGAGAACTCTTCCTTATACTTCA
TCAGCCATGCATAACACCTTTGCTTTCAAAATTGAAGATAAAAGAGGACGGATGCATAGG
TTTACCTGTGATACCCGGAGTTTGACAGATGTCATAACTTCAATCCTTCAGAGAGTGGGT
GATGACATCGATCGCAACAACCTGCCGCAAATTCTGTATGAAGATGAAGACCATGACAAA
GTAGTACTCGCATCAGATAATGATCTTGTGGCAGCCATGGAGCATGCTAGGTTAGCAGGT
TGGAAGGGTTTAAGACTACATTTAGATTACTCGGGGACCCGCCCTCTTAGAAGGGACTCT
GGAACTGGAGGTTTGGAGTATGCTCAGCGAGAAGCATGGGCTTCTGCATACAGTGCCGTT
GCAGCAGGCGCCGCATTTGTAGCTGGGATGGGCTTATTAGCCTACCTGAAGAGATCCAGT
AACTGA

Peptide Sequence

PEP ID

VIT_17s0000g01200.t01
PEP Infomation

pep chromosome:12X:17:851263:859898:-1 gene:VIT_17s0000g01200 transcript:VIT_17s0000g01200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASHGGSSRKSLTLSMPSQGKKKASENGAGPDSARKSLASARSMGLTGERTVKRLRLSRA
LTVPDTTSIYEACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSK
VMTRNPIFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAE
KGKAIAAAVEGVEKNWGTSLSGPSTFIETLRERMFRPALSTIIPENSKVVTVSPTDTVLT
AAKKMLELKLSCAVVAVENRPKGILTSKDILMRVIAQNLHPESTPVEKVMTPNPECATID
TPIVDALHTMHDGKFLHLPVIDRDGGVVAVADVIHITHAAVATVGGNAGVNNEAASSLMQ
KFWDSAMALGTDDDEETRSEGSLKLASEGTEIGRTLPYTSSAMHNTFAFKIEDKRGRMHR
FTCDTRSLTDVITSILQRVGDDIDRNNLPQILYEDEDHDKVVLASDNDLVAAMEHARLAG
WKGLRLHLDYSGTRPLRRDSGTGGLEYAQREAWASAYSAVAAGAAFVAGMGLLAYLKRSS
N

Transcript Sequence

Transcript ID

VIT_17s0000g01200.t01
Transcript Infomation

cdna chromosome:12X:17:851263:859898:-1 gene:VIT_17s0000g01200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGATTCTATTGGTCTTCACCTCATCGAATTCAATTTCAATCTCCCATTTCTTAGGGTTTC
TCATCTCTGCTTTCCCCTCAACGTTTCGCCGGTCGGTGCGTTTCCCGGAAAAGCTCTTGA
GATTTTCCGACCAAAGCCCGACCGCGATCGTTCCATTTTCCTATCTTCTAAACACCCCCG
TAATCCTTCCCGCCTTCAAGTCATCAATCCCCAGGCGCGGAGAATCTCCTCGCCTTTCAA
ATTCCTTGTCGAGATTTGAAGGATTGGTCTTGTTCATCGGCGGAAATGGCTAGTCACGGC
GGTTCATCCAGGAAAAGTTTGACTTTGTCCATGCCATCGCAGGGAAAGAAAAAAGCTTCT
GAGAATGGAGCTGGCCCCGATAGCGCTCGAAAATCTCTTGCCTCTGCTCGTTCCATGGGA
CTGACTGGAGAGCGTACAGTGAAGAGATTGCGACTGTCAAGGGCCCTGACAGTTCCTGAC
ACCACAAGTATTTATGAAGCTTGCCGCCGTATGGCTGCTCGTAGAGTTGATGCCTTATTG
TTAACTGATTCAAATGCGTTACTTTGTGGAATCCTTACAGACAAGGACATAGCAACAAGA
GTCATTGCTCGTGAACTTAATCTTGAGGAAACACCAGTCTCCAAAGTTATGACAAGGAAC
CCAATTTTTGTTCTTTCTGATACTCTTGCTGTGGAAGCCCTGCAAAAGATGGTGCAAGGA
AAGTTCAGACATTTGCCTGTTGTAGAGAATGGGGAGGTCATTGCTTTACTAGACATAGCA
AAGTGTTTATATGATGCTATTGCTCGAATGGAGAGGGCAGCTGAAAAGGGAAAAGCCATT
GCTGCTGCTGTTGAAGGAGTTGAAAAAAATTGGGGGACATCTCTCTCTGGTCCTAGCACA
TTCATTGAGACACTTCGAGAGAGGATGTTTAGGCCTGCTTTGTCCACGATCATCCCCGAG
AATTCAAAGGTTGTAACAGTCTCACCAACTGACACAGTTCTAACAGCAGCAAAGAAGATG
CTTGAACTTAAATTAAGTTGTGCAGTCGTAGCAGTTGAAAACAGACCAAAGGGGATTCTA
ACTTCAAAGGATATCCTGATGCGGGTCATAGCACAAAATCTTCATCCAGAATCCACTCCA
GTGGAGAAGGTCATGACTCCAAATCCAGAATGTGCAACAATTGATACACCCATTGTTGAT
GCCCTACATACCATGCATGATGGGAAATTTTTACACCTTCCTGTCATTGATAGAGATGGT
GGTGTAGTTGCTGTTGCTGATGTAATCCATATCACTCATGCAGCTGTGGCTACAGTGGGA
GGCAATGCTGGAGTTAATAATGAGGCTGCAAGCAGTCTGATGCAGAAGTTCTGGGACTCA
GCCATGGCATTAGGAACTGATGATGACGAAGAAACACGGAGTGAGGGTTCCTTGAAATTG
GCTTCTGAAGGAACTGAAATAGGGAGAACTCTTCCTTATACTTCATCAGCCATGCATAAC
ACCTTTGCTTTCAAAATTGAAGATAAAAGAGGACGGATGCATAGGTTTACCTGTGATACC
CGGAGTTTGACAGATGTCATAACTTCAATCCTTCAGAGAGTGGGTGATGACATCGATCGC
AACAACCTGCCGCAAATTCTGTATGAAGATGAAGACCATGACAAAGTAGTACTCGCATCA
GATAATGATCTTGTGGCAGCCATGGAGCATGCTAGGTTAGCAGGTTGGAAGGGTTTAAGA
CTACATTTAGATTACTCGGGGACCCGCCCTCTTAGAAGGGACTCTGGAACTGGAGGTTTG
GAGTATGCTCAGCGAGAAGCATGGGCTTCTGCATACAGTGCCGTTGCAGCAGGCGCCGCA
TTTGTAGCTGGGATGGGCTTATTAGCCTACCTGAAGAGATCCAGTAACTGATTATTGTTA
AATATTTTATAAGTTTTATACAATGATTTTGCCGAAAAAGAAGCAGATGAGTGGGCCAAA
TCGGAATTGGGGTTCTTGGGGTCAAGCACGGGCTCGATATCTGTTTTTCTGTAGGGGGGA
TAGTAAGAGAGAAAAAAGTCATAATTTTTTTTATCTGGTGCTGGGCCTGCTACTGTTGCA
TTGTTTTTGAATATGTG