Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g01190.t01
CDS Infomation

cds chromosome:12X:17:845803:847606:-1 gene:VIT_17s0000g01190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGAAGGGTTTCAGTACCAGAGGGCCTCCCTTTTCCTTCATTTTCTTTCTGTTTCTC
ACACTTTCAAGTGTTTTCCAAGATGCCCATTTGGGTGCGGTTGCAGCACAGGACCAACGC
ATCAAGACCATTGTGGTCTTGGTTATGGAGAACAGGTCCTTCGATCACATGCTTGGATGG
ATGAAGAGATCCAACTCAGCAATCAATGGAGTCACAGGCAAAGAATGCAACCCAGTTTCT
ACCAAGAATCCATCCGAAGAAACAATCTGCTTCAAAGATGATGCAGAATATGTGGATCCA
GATCCAGGTCACTCCTTTGTAGCAGTGAAACAGCAGGTGTTTGGCTCTGGCACCACTCCT
TCAATGATTGGCTTTGTCGAACAAGCCCTCACCATGTCCAAAGAACTCTCTGAGACAGTC
ATGAAAGGCTTCAAGCCAGAATCAGTCCCAGTTTACGCCAAGCTGGTGGAGGAGTTTGCA
GTTTTTGACAGATGGTTCTCTGCACTTCCTGGCCCAACACAACCCAACAGACTCTTTGTC
TACTCTGGAACTTCCCATGGTGCTGTAAGCCATGTGAAGGAGAACTTGATAAAAGGTTTC
CCACAAAAAACCATATTTGATTCACTCCATGCGAATGGTAAGGACTTTGGCATATACTTT
CAAGAAGCCCCCACAATATTTTTTTATAGGAATATGAGGCAGCTCAAGTATTCCTCCAAG
TTCCGCCTCTATGATTTGCACTTCAAGAAGGATGCTGAAAAGGGCAAGCTGCCCAGCCTA
ACAGTGATTGAGCCCAGGTACTTTGATATCAAGATATTGCCTGCAAACGATGATCACCCC
TCTCATGATGTTGCCAATGGGCAGAAACTTGTGAAGCAGGTGTACGAGACCTTGAGGGCC
AGTCCTCAGTGGAATGAGACCCTTTTTATCATTACTTATGATGAGCATGGTGGATTCTAT
GATCATGTTGAAACCCCTGTAGACAATGTCCCTAGTCCTGATGGCAACACTGGCCCTGCT
CCTGATTTCTTCAAGTTCGATCGCCTCGGGGTTCGGGTTCCTACAATCATGGTCTCTCCT
TGGATCAAGAAAGGAACTATTGTGACTCGCCCAAATGGGCCTGCTGAGAACTCTGAATTC
GAGCACTCTTCCATCCCTGCCACCATCAAGAAAATGTACAACCTGCCATCGAACTTCTTG
ACTCACAGAGATGCTTGGGCCGGCACATTTGAGTCTGTCGTTGGGGAGTTAACTTCTCCC
CGAACTGACTGCCCAGGCAACCACCCTTCCTTGACTCCTCTGAGGAAAACAGAAGCAGAT
GAAGACCGGCAACTGTCTGAGTTTCAAAATGAAATAGTCCAATTAGCAGCCGTTCTTAAG
GGCGATCACCACTTGACCAGCTTCCCAGATGAGCTGTTCAAGAACATGACGGTGAAGGAA
GGCCGTGATTATGTGATAGGAGCCGTTGCAAGGTTCAAAACAGCGAGCAGACAAGCCTTC
ATAATGGGGGCGGACGAGTCTGCCATTGTAGACATGAGGTCCTCCCTCACAACTCAACCT
TCAGTCCACTATTAG

Peptide Sequence

PEP ID

VIT_17s0000g01190.t01
PEP Infomation

pep chromosome:12X:17:845803:847606:-1 gene:VIT_17s0000g01190 transcript:VIT_17s0000g01190.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGKGFSTRGPPFSFIFFLFLTLSSVFQDAHLGAVAAQDQRIKTIVVLVMENRSFDHMLGW
MKRSNSAINGVTGKECNPVSTKNPSEETICFKDDAEYVDPDPGHSFVAVKQQVFGSGTTP
SMIGFVEQALTMSKELSETVMKGFKPESVPVYAKLVEEFAVFDRWFSALPGPTQPNRLFV
YSGTSHGAVSHVKENLIKGFPQKTIFDSLHANGKDFGIYFQEAPTIFFYRNMRQLKYSSK
FRLYDLHFKKDAEKGKLPSLTVIEPRYFDIKILPANDDHPSHDVANGQKLVKQVYETLRA
SPQWNETLFIITYDEHGGFYDHVETPVDNVPSPDGNTGPAPDFFKFDRLGVRVPTIMVSP
WIKKGTIVTRPNGPAENSEFEHSSIPATIKKMYNLPSNFLTHRDAWAGTFESVVGELTSP
RTDCPGNHPSLTPLRKTEADEDRQLSEFQNEIVQLAAVLKGDHHLTSFPDELFKNMTVKE
GRDYVIGAVARFKTASRQAFIMGADESAIVDMRSSLTTQPSVHY

Transcript Sequence

Transcript ID

VIT_17s0000g01190.t01
Transcript Infomation

cdna chromosome:12X:17:845803:847606:-1 gene:VIT_17s0000g01190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAGAGAAGGATTCAGTTGAGAATCAAGGATGGGGAAGGGTTTCAGTACCAGAGGGCCTC
CCTTTTCCTTCATTTTCTTTCTGTTTCTCACACTTTCAAGTGTTTTCCAAGATGCCCATT
TGGGTGCGGTTGCAGCACAGGACCAACGCATCAAGACCATTGTGGTCTTGGTTATGGAGA
ACAGGTCCTTCGATCACATGCTTGGATGGATGAAGAGATCCAACTCAGCAATCAATGGAG
TCACAGGCAAAGAATGCAACCCAGTTTCTACCAAGAATCCATCCGAAGAAACAATCTGCT
TCAAAGATGATGCAGAATATGTGGATCCAGATCCAGGTCACTCCTTTGTAGCAGTGAAAC
AGCAGGTGTTTGGCTCTGGCACCACTCCTTCAATGATTGGCTTTGTCGAACAAGCCCTCA
CCATGTCCAAAGAACTCTCTGAGACAGTCATGAAAGGCTTCAAGCCAGAATCAGTCCCAG
TTTACGCCAAGCTGGTGGAGGAGTTTGCAGTTTTTGACAGATGGTTCTCTGCACTTCCTG
GCCCAACACAACCCAACAGACTCTTTGTCTACTCTGGAACTTCCCATGGTGCTGTAAGCC
ATGTGAAGGAGAACTTGATAAAAGGTTTCCCACAAAAAACCATATTTGATTCACTCCATG
CGAATGGTAAGGACTTTGGCATATACTTTCAAGAAGCCCCCACAATATTTTTTTATAGGA
ATATGAGGCAGCTCAAGTATTCCTCCAAGTTCCGCCTCTATGATTTGCACTTCAAGAAGG
ATGCTGAAAAGGGCAAGCTGCCCAGCCTAACAGTGATTGAGCCCAGGTACTTTGATATCA
AGATATTGCCTGCAAACGATGATCACCCCTCTCATGATGTTGCCAATGGGCAGAAACTTG
TGAAGCAGGTGTACGAGACCTTGAGGGCCAGTCCTCAGTGGAATGAGACCCTTTTTATCA
TTACTTATGATGAGCATGGTGGATTCTATGATCATGTTGAAACCCCTGTAGACAATGTCC
CTAGTCCTGATGGCAACACTGGCCCTGCTCCTGATTTCTTCAAGTTCGATCGCCTCGGGG
TTCGGGTTCCTACAATCATGGTCTCTCCTTGGATCAAGAAAGGAACTATTGTGACTCGCC
CAAATGGGCCTGCTGAGAACTCTGAATTCGAGCACTCTTCCATCCCTGCCACCATCAAGA
AAATGTACAACCTGCCATCGAACTTCTTGACTCACAGAGATGCTTGGGCCGGCACATTTG
AGTCTGTCGTTGGGGAGTTAACTTCTCCCCGAACTGACTGCCCAGGCAACCACCCTTCCT
TGACTCCTCTGAGGAAAACAGAAGCAGATGAAGACCGGCAACTGTCTGAGTTTCAAAATG
AAATAGTCCAATTAGCAGCCGTTCTTAAGGGCGATCACCACTTGACCAGCTTCCCAGATG
AGCTGTTCAAGAACATGACGGTGAAGGAAGGCCGTGATTATGTGATAGGAGCCGTTGCAA
GGTTCAAAACAGCGAGCAGACAAGCCTTCATAATGGGGGCGGACGAGTCTGCCATTGTAG
ACATGAGGTCCTCCCTCACAACTCAACCTTCAGTCCACTATTAGTA