Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g00870.t01
CDS Infomation

cds chromosome:12X:17_random:582077:609120:1 gene:VIT_17s0000g00870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGTCTACCTTGTTATCGCCGCTGGGTCTGAGTCGGAGTCTGAAGCGATCGCCTTCT
CTCCCAAAGCTATCAACAAAACCTTGGAAAGCAGTGTGTGAAATGGAGGCAACCAAGCAA
CTGAGCTTCGATTTTCTGACGAAGAAGCCCTATGCTCCTCCTTCCTGGGCCTCCCATCTC
TCCCCTATTCCCTCTCACGTCTTCTCCCTCGCTCATGTGCCTACTCCTATTCATAAGTGG
AATCTTCCTAATTTACCCAAAAACACTCAACTCTGGATTAAGCGTGATGACCTTTCTGGA
ATGCAAATGAGTGGTAACAAAGTCAGAAAACTGGAATTCTTGATGGCAGATGCTGTAGCC
CAGGGCTCAGACTGTATTATAACGATAGGAGGCATCCAAAGCAACCACTGCCGAGCAACT
GCTGTAGCTGCAAAGTATCTGAACCTTGACTGTTATCTTATACTTCGTACCTCTAAGGTT
CTTGTAGACAAAGATCCCGGATTGACGGGCAATCTCTTGGTTGAACGTTTAATTGGAGCT
CAAATTGAACTTGTTTCAAAAGAAGAATATGCAAAACTTGGGAGTGTGACTCTTACCAAT
CTGCTAAAAGAAAGGTTACTGAAGGAAGGGAGAAGGCCATATGTCATTCCTGTTGGTGGA
TCAAACTCCCTAGGAACCTGGGGCTATATTGAAGCAATTAGGGAGATTGAGCAGCAGCTT
CCAACTGGGACTGATGAAGTAGGATTTGATGATATTGTTGTCGCATGTGGCAGTGGGGCT
ACAATTGCTGGTCTATCATTGGGATCTTCACTCAGTAAATTGAACACAAAAGTGCTTGCA
TTTTCTGTTTGTGATGACCCAGATTACTTCTATGACTATGTTCAAGGCTTGCTTGATGGA
CTCCAAGCTGGTGTTCGCTCACATGATATAGTTGACATTCAAAATGCCAAAGGATTGGGT
TATGCAATAAATACCACTGAAGAGCTTAATTTTCTTAAAGAAGTGGCTGTTTCCACTGGC
GTTGTCCTCGACCCAGTTTACAGTGGAAAAGCTGCTTATGGAATGATTAAGGACATGGCT
GAGAATCCCTCAAAGTGGGAAGGGAGAAATATCCTCTTCATACACACAGGCGGACTCCTT
GGGCTTTATGACAAGGTTGAACAGATGGGATCATTGGTGGGGAAATGGTGCAAAATGAAC
ATCGATGATTCTATCCCAAGGAAAGATGGTATTGGAAAAATGTTCTAG

Peptide Sequence

PEP ID

VIT_17s0000g00870.t01
PEP Infomation

pep chromosome:12X:17_random:582077:609120:1 gene:VIT_17s0000g00870 transcript:VIT_17s0000g00870.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLSTLLSPLGLSRSLKRSPSLPKLSTKPWKAVCEMEATKQLSFDFLTKKPYAPPSWASHL
SPIPSHVFSLAHVPTPIHKWNLPNLPKNTQLWIKRDDLSGMQMSGNKVRKLEFLMADAVA
QGSDCIITIGGIQSNHCRATAVAAKYLNLDCYLILRTSKVLVDKDPGLTGNLLVERLIGA
QIELVSKEEYAKLGSVTLTNLLKERLLKEGRRPYVIPVGGSNSLGTWGYIEAIREIEQQL
PTGTDEVGFDDIVVACGSGATIAGLSLGSSLSKLNTKVLAFSVCDDPDYFYDYVQGLLDG
LQAGVRSHDIVDIQNAKGLGYAINTTEELNFLKEVAVSTGVVLDPVYSGKAAYGMIKDMA
ENPSKWEGRNILFIHTGGLLGLYDKVEQMGSLVGKWCKMNIDDSIPRKDGIGKMF

Transcript Sequence

Transcript ID

VIT_17s0000g00870.t01
Transcript Infomation

cdna chromosome:12X:17_random:582077:609120:1 gene:VIT_17s0000g00870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTATTGGACGTAAAATCGATGTGAATGTTGTCTACCTTGTTATCGCCGCTGGGTCTGAGT
CGGAGTCTGAAGCGATCGCCTTCTCTCCCAAAGCTATCAACAAAACCTTGGAAAGCAGTG
TGTGAAATGGAGGCAACCAAGCAACTGAGCTTCGATTTTCTGACGAAGAAGCCCTATGCT
CCTCCTTCCTGGGCCTCCCATCTCTCCCCTATTCCCTCTCACGTCTTCTCCCTCGCTCAT
GTGCCTACTCCTATTCATAAGTGGAATCTTCCTAATTTACCCAAAAACACTCAACTCTGG
ATTAAGCGTGATGACCTTTCTGGAATGCAAATGAGTGGTAACAAAGTCAGAAAACTGGAA
TTCTTGATGGCAGATGCTGTAGCCCAGGGCTCAGACTGTATTATAACGATAGGAGGCATC
CAAAGCAACCACTGCCGAGCAACTGCTGTAGCTGCAAAGTATCTGAACCTTGACTGTTAT
CTTATACTTCGTACCTCTAAGGTTCTTGTAGACAAAGATCCCGGATTGACGGGCAATCTC
TTGGTTGAACGTTTAATTGGAGCTCAAATTGAACTTGTTTCAAAAGAAGAATATGCAAAA
CTTGGGAGTGTGACTCTTACCAATCTGCTAAAAGAAAGGTTACTGAAGGAAGGGAGAAGG
CCATATGTCATTCCTGTTGGTGGATCAAACTCCCTAGGAACCTGGGGCTATATTGAAGCA
ATTAGGGAGATTGAGCAGCAGCTTCCAACTGGGACTGATGAAGTAGGATTTGATGATATT
GTTGTCGCATGTGGCAGTGGGGCTACAATTGCTGGTCTATCATTGGGATCTTCACTCAGT
AAATTGAACACAAAAGTGCTTGCATTTTCTGTTTGTGATGACCCAGATTACTTCTATGAC
TATGTTCAAGGCTTGCTTGATGGACTCCAAGCTGGTGTTCGCTCACATGATATAGTTGAC
ATTCAAAATGCCAAAGGATTGGGTTATGCAATAAATACCACTGAAGAGCTTAATTTTCTT
AAAGAAGTGGCTGTTTCCACTGGCGTTGTCCTCGACCCAGTTTACAGTGGAAAAGCTGCT
TATGGAATGATTAAGGACATGGCTGAGAATCCCTCAAAGTGGGAAGGGAGAAATATCCTC
TTCATACACACAGGCGGACTCCTTGGGCTTTATGACAAGGTTGAACAGATGGGATCATTG
GTGGGGAAATGGTGCAAAATGAACATCGATGATTCTATCCCAAGGAAAGATGGTATTGGA
AAAATGTTCTAGTAAAATAATTCATGCTTGCATCTCTTCAATCTCCACCTCAAATTCTAG
ATTAGGTATGCGTCTCATTCTCTCGTAGTGTGTTGAAATATGGTCATAAACTCACTTTTA
GAATTGTAACCATTGAGATATTGCTATATGCTGTTCTGGTTTATCTCGTCTGTCTGT