Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g00860.t01
CDS Infomation

cds chromosome:12X:17:569936:580123:1 gene:VIT_17s0000g00860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATGGAATATTTAATGAGCAGATTTTGGTTGAGAAGCTAGCCAAACTCAATAGCTCA
CAAAAGAGCATAGAGACTTTATCACACTGGTGCATTTTCCATAGGAAGAGAGCAAAACAA
GTTGTTGAAACATGGGAAAGACAGTTCCATTGCTCCCTGAGGGAGCAGCGACTCTCCTTT
CTATATCTTGCAAATGATATTTTGCAGAATAGTAGGCGAAATGGTTTGGAGTTTGTTGGT
GAATTTTGGAAGGTTCTTCCAAATGCTCTTCGTGATGTAGTAGAAAGTGGAGATGATTTT
GGGAAAAATGCTGTGCTGCGACTGATTAATATATGGGATGAGAGAAAGGTATTCGGTTCT
AGGGGGCAAATTCTCAAAGAAGAGCTCATGGGGAAGACTGTGGAGAATAATGATAAAAAT
AATAATAACAATTCATATAGCAAGAACTTGAGCTTTAGACATGTGACTGCAGTGGAAAAA
ATCATTTCAAGTTATGAAAATGTATATGGTAGTCCATTGGATGAAGAAACTCTATTGAGC
AAATGCAGGAGCGCTATTGGTTGCATTGAGAAAGCAGAGAAGGAGATTGGTGGTGATTAC
AGCTCAGGGCAATTCAATGGATCTAAATATGTTGAGGAGTTGCAAGGGCAGCATGACATA
CTGACAGAATGTATCGAGCAACTGAGAACAGCTGAATCATCAAGAGCAAGTCTCGTGTCT
CATTTGAAGGAGGCTCTCCAAGAGCAGGAATTCAAGCTGGATCAAGTTCACAATCAACTT
CAGGTTGCCGAGTCACAATCAGCACATATAAGCAGCATTCGGCAACAATTGCTGAACTGC
AACAGAGGTCATATGACAGCAGAGCAGAGGGATGTTAACGCTCATGCTGAGGCACCTTCC
ACTTTCACTCCAGAAACTCCAGCCACTGGTGGAGACAAGGAACAATCAGCTCCGGTAATG
TACACAAGGGAGGAATCTTTCACTGGTAAGTCTTCTTCCCGCTTTGAAGAAGATCCACGG
AAATCTGCAGCTGCTGCTGTGGCAGCAAAGCTTGCAGCTTCAACCTCCTCGGCCCAAATG
CTATCCTATGTGTTCTCCTCTCTGGCGTCAGAATCGGCGGATGGAAATCCAAAGGAAGAA
TCTCCTGATGCTCTTCCTTTTGAGAAAAGGCCAAAACTTGAAAACCTTCCTTTTTCCTAC
TTCCCACCTCAGCATTCCCAACAACCACCACTTCCCCCTTTTCCCCATCCTGATTCGCTC
CAAAACAAGGCGACAGCTACCTCGCAAATGCCTCCGCAGCAGCCACCTCCCCAACTGTCC
CCTCAGGTGTCACATCCAGATCTGGCCATGCATCAGGCAGCACCACCTCCGCTACCAACT
CTCCCACAGCTAGCCACGCCACCATTTATGCAGACAGCTGGATCTATGATAGGTGCACCG
TACAACTATACACCACCACTGCCTCCACCTCCTGGCTTTTCAATACCTAGAACCCCACTA
ACTGCTGTCCCTTATCCTTCTCCGCCGATTCCATACCAGAATTTTCAGGGGCCAGAAGGT
TTCTTCAGTCAGCCGCCCATACCAGCAACACCTCCAATTTCGAGGTCCTAG

Peptide Sequence

PEP ID

VIT_17s0000g00860.t01
PEP Infomation

pep chromosome:12X:17:569936:580123:1 gene:VIT_17s0000g00860 transcript:VIT_17s0000g00860.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNGIFNEQILVEKLAKLNSSQKSIETLSHWCIFHRKRAKQVVETWERQFHCSLREQRLSF
LYLANDILQNSRRNGLEFVGEFWKVLPNALRDVVESGDDFGKNAVLRLINIWDERKVFGS
RGQILKEELMGKTVENNDKNNNNNSYSKNLSFRHVTAVEKIISSYENVYGSPLDEETLLS
KCRSAIGCIEKAEKEIGGDYSSGQFNGSKYVEELQGQHDILTECIEQLRTAESSRASLVS
HLKEALQEQEFKLDQVHNQLQVAESQSAHISSIRQQLLNCNRGHMTAEQRDVNAHAEAPS
TFTPETPATGGDKEQSAPVMYTREESFTGKSSSRFEEDPRKSAAAAVAAKLAASTSSAQM
LSYVFSSLASESADGNPKEESPDALPFEKRPKLENLPFSYFPPQHSQQPPLPPFPHPDSL
QNKATATSQMPPQQPPPQLSPQVSHPDLAMHQAAPPPLPTLPQLATPPFMQTAGSMIGAP
YNYTPPLPPPPGFSIPRTPLTAVPYPSPPIPYQNFQGPEGFFSQPPIPATPPISRS

Transcript Sequence

Transcript ID

VIT_17s0000g00860.t01
Transcript Infomation

cdna chromosome:12X:17:569936:580123:1 gene:VIT_17s0000g00860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATGGAATATTTAATGAGCAGATTTTGGTTGAGAAGCTAGCCAAACTCAATAGCTCA
CAAAAGAGCATAGAGACTTTATCACACTGGTGCATTTTCCATAGGAAGAGAGCAAAACAA
GTTGTTGAAACATGGGAAAGACAGTTCCATTGCTCCCTGAGGGAGCAGCGACTCTCCTTT
CTATATCTTGCAAATGATATTTTGCAGAATAGTAGGCGAAATGGTTTGGAGTTTGTTGGT
GAATTTTGGAAGGTTCTTCCAAATGCTCTTCGTGATGTAGTAGAAAGTGGAGATGATTTT
GGGAAAAATGCTGTGCTGCGACTGATTAATATATGGGATGAGAGAAAGGTATTCGGTTCT
AGGGGGCAAATTCTCAAAGAAGAGCTCATGGGGAAGACTGTGGAGAATAATGATAAAAAT
AATAATAACAATTCATATAGCAAGAACTTGAGCTTTAGACATGTGACTGCAGTGGAAAAA
ATCATTTCAAGTTATGAAAATGTATATGGTAGTCCATTGGATGAAGAAACTCTATTGAGC
AAATGCAGGAGCGCTATTGGTTGCATTGAGAAAGCAGAGAAGGAGATTGGTGGTGATTAC
AGCTCAGGGCAATTCAATGGATCTAAATATGTTGAGGAGTTGCAAGGGCAGCATGACATA
CTGACAGAATGTATCGAGCAACTGAGAACAGCTGAATCATCAAGAGCAAGTCTCGTGTCT
CATTTGAAGGAGGCTCTCCAAGAGCAGGAATTCAAGCTGGATCAAGTTCACAATCAACTT
CAGGTTGCCGAGTCACAATCAGCACATATAAGCAGCATTCGGCAACAATTGCTGAACTGC
AACAGAGGTCATATGACAGCAGAGCAGAGGGATGTTAACGCTCATGCTGAGGCACCTTCC
ACTTTCACTCCAGAAACTCCAGCCACTGGTGGAGACAAGGAACAATCAGCTCCGGTAATG
TACACAAGGGAGGAATCTTTCACTGGTAAGTCTTCTTCCCGCTTTGAAGAAGATCCACGG
AAATCTGCAGCTGCTGCTGTGGCAGCAAAGCTTGCAGCTTCAACCTCCTCGGCCCAAATG
CTATCCTATGTGTTCTCCTCTCTGGCGTCAGAATCGGCGGATGGAAATCCAAAGGAAGAA
TCTCCTGATGCTCTTCCTTTTGAGAAAAGGCCAAAACTTGAAAACCTTCCTTTTTCCTAC
TTCCCACCTCAGCATTCCCAACAACCACCACTTCCCCCTTTTCCCCATCCTGATTCGCTC
CAAAACAAGGCGACAGCTACCTCGCAAATGCCTCCGCAGCAGCCACCTCCCCAACTGTCC
CCTCAGGTGTCACATCCAGATCTGGCCATGCATCAGGCAGCACCACCTCCGCTACCAACT
CTCCCACAGCTAGCCACGCCACCATTTATGCAGACAGCTGGATCTATGATAGGTGCACCG
TACAACTATACACCACCACTGCCTCCACCTCCTGGCTTTTCAATACCTAGAACCCCACTA
ACTGCTGTCCCTTATCCTTCTCCGCCGATTCCATACCAGAATTTTCAGGGGCCAGAAGGT
TTCTTCAGTCAGCCGCCCATACCAGCAACACCTCCAATTTCGAGGTCCTAGAACTGCGAG
GTATGTAGTTGGTGCTTTAGAAGTTTTACATGGCAACTTGACTTCGTAGGAAATTTACCA
ACCTCCTTGATGATGGAAGATGAAGCTTCTTGTAATATTACATGTAAATTACTTAGATTA
TCGTAAAGCTCACAGTTATATTAGTTAATTATGCTGATAAATTTTTTGAAG