Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g00660.t01
CDS Infomation

cds chromosome:12X:17:433722:440610:1 gene:VIT_17s0000g00660 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATAGTGCAGTCAAGCCTAAGACAAGAGTGGCATTTGTGCTGATTGATGGCATAGGA
GATGTCTCTTTGCCAAGGTTGGGATACAAGACTCCTCTGCAAGCAGCCAAAATACCAAAT
TTAGATGCCATTGCATCTGCTGGAGTTAATGGTCTCATGGATCCTGTTGAAGTAGGCTTG
GGTTGTGGAAGCGACACCGCACACCTTTCTTTATTGGGTTATAACCCAAGAATATATTAC
CGAGGCCGAGGTGCATTTGAGTCCATGGGTGCTGGATTAGCAATGTTACCTGGAGATATT
GCATTCAAGTCAAACTTTGCAACTTTAGATGAGAAGACTGGAATAGTCACCAGTAGAAGG
GCTGACAGGCACTTCGAAGAAGAAGGCCCCATCCTCTGTGCTGCACTGGATGGAATGAAG
CTGCCATCTTTTCCTCAGTATGAAGTCAGAGTCAGGTATGCAACAGAGCATAGATGCGGA
GTGGTTGTGAAAGGACCAAATTTGAGTGGAAATATATCAGGAACAGACCCATTAAAGGAT
AACCGTTTGCTTTTACAAGCTACAGCTCTAGATGATACTGATGAAGCAAAGCACACAGCT
GCAGTTGTTAATGAATTGTCCAAGGAGATATCACGAATTCTTGTTTCTCACCCTTTGAAC
GCAAAGCGGGCAGCAGAAGGAAAGAACATTGCTAATGTTGTCCTTTTACGAGGTTGCGGT
ATTTGCATTGAGGTTCCTCCGTTTGAAAAGAAACATGGGCTATGGCCATGCATGGTAGCT
CCCACTAAAATTATAGCTGGCCTGGGCTTATCACTTGGTATTGATATCCTAGAAGCTCCC
GGAGCAACTGGAGACTATCGAACACTTCTAACTTCCAAAGCAACTGCCATAGCTAAAGCA
CTATCAGCTCCTTTGCAGTCTTGCCCTAGTGTTTTTGTACCAGGGGAGGATGAGCACAAA
CCTGGCCGATCGGATGGCTATGATTTTGGGTTTCTTCACATTAAGGCTATTGATGATGCA
GGCCATGACAAGGCGAGCATTTTCAAAGTCAAAGCAATGGAAGCTGTAGACAGAGCTATA
GGACAGCTGGCCAGGCTCCTCTGGCAGGCAGAATCAACTGGGAAATTTGAATACTATCTT
TGTGTTACTGGAGACCATTCTACTCCAGTTGAATATGGAGATCACAGTTTTGAACCTGTT
CCATTTGCAATTTGTCAGTTGAAAGACTTTGTTGATGCAATGGGTGGAGAAGCCGCCATC
ATGAAAACTTCACTTGAACCATTCCCTCTTCCAACCATCAAGGGGGATGAAGATCTAACA
GAAGGTTTGGAAAAGATGGAAGAGAGAAGTAAACAAGCTTTCAATGGTGATTCGGTTTCA
GAATTTACTGAAATAGCAGCTGCAAGGGGATGTCTTGGGCGATTCTCAGGGAGCGAGATG
ATGGGAATTATTAAGACATATCTTAAGCTAAAAGCATGA

Peptide Sequence

PEP ID

VIT_17s0000g00660.t01
PEP Infomation

pep chromosome:12X:17:433722:440610:1 gene:VIT_17s0000g00660 transcript:VIT_17s0000g00660.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDSAVKPKTRVAFVLIDGIGDVSLPRLGYKTPLQAAKIPNLDAIASAGVNGLMDPVEVGL
GCGSDTAHLSLLGYNPRIYYRGRGAFESMGAGLAMLPGDIAFKSNFATLDEKTGIVTSRR
ADRHFEEEGPILCAALDGMKLPSFPQYEVRVRYATEHRCGVVVKGPNLSGNISGTDPLKD
NRLLLQATALDDTDEAKHTAAVVNELSKEISRILVSHPLNAKRAAEGKNIANVVLLRGCG
ICIEVPPFEKKHGLWPCMVAPTKIIAGLGLSLGIDILEAPGATGDYRTLLTSKATAIAKA
LSAPLQSCPSVFVPGEDEHKPGRSDGYDFGFLHIKAIDDAGHDKASIFKVKAMEAVDRAI
GQLARLLWQAESTGKFEYYLCVTGDHSTPVEYGDHSFEPVPFAICQLKDFVDAMGGEAAI
MKTSLEPFPLPTIKGDEDLTEGLEKMEERSKQAFNGDSVSEFTEIAAARGCLGRFSGSEM
MGIIKTYLKLKA

Transcript Sequence

Transcript ID

VIT_17s0000g00660.t01
Transcript Infomation

cdna chromosome:12X:17:433722:440610:1 gene:VIT_17s0000g00660 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAATGGTTGCAATGCAGAAGAAAAACCAGATGGTGGTCAGTATCTTCTTGCTTTCGGTAA
GGAAATTGAACCTAAACCCTAGATAAATCTTAAAAAACCCTACCTCCTAATCTTTTTCGC
AGTCTAAATACAGCAGGAAAAAGCACAGCTGAAGCTTCTTACAGATTGCTGGAGTAGGAT
GGCCTGGTGTTGAGTAATTGTGCATTCTCAACACTGCTATTTTCTTATTTCAAAAGAGCT
AGGACAGCTACATATAGCATATAGGATCATGGATAGTGCAGTCAAGCCTAAGACAAGAGT
GGCATTTGTGCTGATTGATGGCATAGGAGATGTCTCTTTGCCAAGGTTGGGATACAAGAC
TCCTCTGCAAGCAGCCAAAATACCAAATTTAGATGCCATTGCATCTGCTGGAGTTAATGG
TCTCATGGATCCTGTTGAAGTAGGCTTGGGTTGTGGAAGCGACACCGCACACCTTTCTTT
ATTGGGTTATAACCCAAGAATATATTACCGAGGCCGAGGTGCATTTGAGTCCATGGGTGC
TGGATTAGCAATGTTACCTGGAGATATTGCATTCAAGTCAAACTTTGCAACTTTAGATGA
GAAGACTGGAATAGTCACCAGTAGAAGGGCTGACAGGCACTTCGAAGAAGAAGGCCCCAT
CCTCTGTGCTGCACTGGATGGAATGAAGCTGCCATCTTTTCCTCAGTATGAAGTCAGAGT
CAGGTATGCAACAGAGCATAGATGCGGAGTGGTTGTGAAAGGACCAAATTTGAGTGGAAA
TATATCAGGAACAGACCCATTAAAGGATAACCGTTTGCTTTTACAAGCTACAGCTCTAGA
TGATACTGATGAAGCAAAGCACACAGCTGCAGTTGTTAATGAATTGTCCAAGGAGATATC
ACGAATTCTTGTTTCTCACCCTTTGAACGCAAAGCGGGCAGCAGAAGGAAAGAACATTGC
TAATGTTGTCCTTTTACGAGGTTGCGGTATTTGCATTGAGGTTCCTCCGTTTGAAAAGAA
ACATGGGCTATGGCCATGCATGGTAGCTCCCACTAAAATTATAGCTGGCCTGGGCTTATC
ACTTGGTATTGATATCCTAGAAGCTCCCGGAGCAACTGGAGACTATCGAACACTTCTAAC
TTCCAAAGCAACTGCCATAGCTAAAGCACTATCAGCTCCTTTGCAGTCTTGCCCTAGTGT
TTTTGTACCAGGGGAGGATGAGCACAAACCTGGCCGATCGGATGGCTATGATTTTGGGTT
TCTTCACATTAAGGCTATTGATGATGCAGGCCATGACAAGGCGAGCATTTTCAAAGTCAA
AGCAATGGAAGCTGTAGACAGAGCTATAGGACAGCTGGCCAGGCTCCTCTGGCAGGCAGA
ATCAACTGGGAAATTTGAATACTATCTTTGTGTTACTGGAGACCATTCTACTCCAGTTGA
ATATGGAGATCACAGTTTTGAACCTGTTCCATTTGCAATTTGTCAGTTGAAAGACTTTGT
TGATGCAATGGGTGGAGAAGCCGCCATCATGAAAACTTCACTTGAACCATTCCCTCTTCC
AACCATCAAGGGGGATGAAGATCTAACAGAAGGTTTGGAAAAGATGGAAGAGAGAAGTAA
ACAAGCTTTCAATGGTGATTCGGTTTCAGAATTTACTGAAATAGCAGCTGCAAGGGGATG
TCTTGGGCGATTCTCAGGGAGCGAGATGATGGGAATTATTAAGACATATCTTAAGCTAAA
AGCATGAGCTTCTGAGTAGAGGCATTGGTTAAGGTTTTGAGCTTCACCAGATGGTTCCCA
ATAAGGTAATGTCTTAAATTCTAAACTAACAGAATAAATTTAGCTTCTCCAAAATTTTCC
CATCATCCTAATCTTTCCCACTGTAGATCTCTAAGGTGAGAGACTCTTGGCCTTTGCTTC
TTCTGGTCATGTACTTAAAGCA