Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g00520.t01
CDS Infomation

cds chromosome:12X:17:344956:353370:-1 gene:VIT_17s0000g00520 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGAAAACGACGTCGTCTAGTGGAGGGAAGCAGGGGCTGGGATGGATGGAGTGGCTG
AGGGGATGGCTGTATGTGATATACGAGATGCTGTTTCAGAGAATCTCCGCCAGCCATTTG
CAGAACCCCTTGCCTTTGCCTCCTCTCCACGATCTCACCTGCATCATCACCGGATCTACC
AGCGGAATCGGCCTCCAAATCGCCAGACAGTTGGCGGAAGCAGGGGCGCATGTGGTTATG
GCGGTGAGAAATTCCAAGGCGGCTAATGATTTGATTCAGAAGTGGCAGAGTGAGTGGTCT
GGGAAAGGCCTTCCTCTCAACATTGAGGTGATGGAACTTGATCTCCTCTCCTTGGATTCT
GTTGCGAGATTTTGTGAAGCGTGGAATGCGCGATCAGCACCTTTGCATGTTCTTATAAAT
AATGCGGGAATATTTTCCATTGGAGAACCACAAAAATTTTCAAAGGACGGGTATGAAGAA
CACATGCAAGTGAATCATCTGGCTCCAGCATTGCTTTCAATATTGCTTTTGCCATCCCTT
ATTAGAGGCTCTCCAAGTCGAATTGTTAATGTGAATTCCGTTATGCATTACATTGGCTTT
GTTGACACGGAAGATATGAATGTTGTTTCTGGGAAAAGAAAATATACAAGTTTGGTTGGA
TACTCTAGCAGCAAGCTAGCACAGGTCCAGTTTAGCAGTGTCCTCCATAAGCGGCTACCT
GCTGAAGCTGGTGTTAGTGTAGTATGTGTGTCACCTGGAGTGGTCCAAACAAACGTTGCA
AGGGATCTTCCTAGAATTGTTCAAGCCGCTTATCATCTAATACCCTACTTTATCTTCACT
CCTCAAGAAGGCTCTAGAAGTGCTTTGTTTGCAGCCACTGACCCGCAGATTCCAGAATAC
TGTGAAATGTTGAAAGCAGACGAGTGGCCTGTCTCTGCTTTCATCTCTCAGGATTGTAAT
CCAACAAATCCTTCAGAAGAAGCCCACAACATTGAAACTTCTTACAGAGTGTGGGAGAAG
ACATTGGAGCTGATTGGTCTTCCTCTTGATTCTGTGGAGAGGCTTATAGAAGGAGAAGAA
GTTAAATGCCGATACGGGGGTCAGGCGGAGGAGTAG

Peptide Sequence

PEP ID

VIT_17s0000g00520.t01
PEP Infomation

pep chromosome:12X:17:344956:353370:-1 gene:VIT_17s0000g00520 transcript:VIT_17s0000g00520.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGKTTSSSGGKQGLGWMEWLRGWLYVIYEMLFQRISASHLQNPLPLPPLHDLTCIITGST
SGIGLQIARQLAEAGAHVVMAVRNSKAANDLIQKWQSEWSGKGLPLNIEVMELDLLSLDS
VARFCEAWNARSAPLHVLINNAGIFSIGEPQKFSKDGYEEHMQVNHLAPALLSILLLPSL
IRGSPSRIVNVNSVMHYIGFVDTEDMNVVSGKRKYTSLVGYSSSKLAQVQFSSVLHKRLP
AEAGVSVVCVSPGVVQTNVARDLPRIVQAAYHLIPYFIFTPQEGSRSALFAATDPQIPEY
CEMLKADEWPVSAFISQDCNPTNPSEEAHNIETSYRVWEKTLELIGLPLDSVERLIEGEE
VKCRYGGQAEE

Transcript Sequence

Transcript ID

VIT_17s0000g00520.t01
Transcript Infomation

cdna chromosome:12X:17:344956:353370:-1 gene:VIT_17s0000g00520 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGCTACAGGAGGGTGGGAGGAGGAGGAGGAGGAGGAGGAGAATGGGGAAAACGACGTCG
TCTAGTGGAGGGAAGCAGGGGCTGGGATGGATGGAGTGGCTGAGGGGATGGCTGTATGTG
ATATACGAGATGCTGTTTCAGAGAATCTCCGCCAGCCATTTGCAGAACCCCTTGCCTTTG
CCTCCTCTCCACGATCTCACCTGCATCATCACCGGATCTACCAGCGGAATCGGCCTCCAA
ATCGCCAGACAGTTGGCGGAAGCAGGGGCGCATGTGGTTATGGCGGTGAGAAATTCCAAG
GCGGCTAATGATTTGATTCAGAAGTGGCAGAGTGAGTGGTCTGGGAAAGGCCTTCCTCTC
AACATTGAGGTGATGGAACTTGATCTCCTCTCCTTGGATTCTGTTGCGAGATTTTGTGAA
GCGTGGAATGCGCGATCAGCACCTTTGCATGTTCTTATAAATAATGCGGGAATATTTTCC
ATTGGAGAACCACAAAAATTTTCAAAGGACGGGTATGAAGAACACATGCAAGTGAATCAT
CTGGCTCCAGCATTGCTTTCAATATTGCTTTTGCCATCCCTTATTAGAGGCTCTCCAAGT
CGAATTGTTAATGTGAATTCCGTTATGCATTACATTGGCTTTGTTGACACGGAAGATATG
AATGTTGTTTCTGGGAAAAGAAAATATACAAGTTTGGTTGGATACTCTAGCAGCAAGCTA
GCACAGGTCCAGTTTAGCAGTGTCCTCCATAAGCGGCTACCTGCTGAAGCTGGTGTTAGT
GTAGTATGTGTGTCACCTGGAGTGGTCCAAACAAACGTTGCAAGGGATCTTCCTAGAATT
GTTCAAGCCGCTTATCATCTAATACCCTACTTTATCTTCACTCCTCAAGAAGGCTCTAGA
AGTGCTTTGTTTGCAGCCACTGACCCGCAGATTCCAGAATACTGTGAAATGTTGAAAGCA
GACGAGTGGCCTGTCTCTGCTTTCATCTCTCAGGATTGTAATCCAACAAATCCTTCAGAA
GAAGCCCACAACATTGAAACTTCTTACAGAGTGTGGGAGAAGACATTGGAGCTGATTGGT
CTTCCTCTTGATTCTGTGGAGAGGCTTATAGAAGGAGAAGAAGTTAAATGCCGATACGGG
GGTCAGGCGGAGGAGTAGTTCTCATCTCATGGTTAGTATTATTCGTCTCTGTAGGCATTC
TCCCAGGTGAGGAACACCGAACACATATGGCTGACTAGCTTTGCTATGTATATCTGGTTG
GGTGTCTGTTGAGGAAATCCACTTTTATCAATCACTAAGTTATATTTTCAAATGAAGAAA
GAAATAGTGAACAGTTTGAGAAGGAGTTCCATCCATTTTTGGAAAGAAAATGGAATCCCC
TGCTTCTAAAGGTTTCTTCTGACTTAGTTGTATGATAAATGGTACTTACTTTTAACACTT
GCCCTTTGAAGAATTTGTCAGCTACCAGTATTAAACCATGGTTGTTTCTTTAATCAATCT
TCAGTTACA