Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g00500.t01
CDS Infomation

cds chromosome:12X:17:338058:343434:-1 gene:VIT_17s0000g00500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATTACCATTCCATATTTGACCGCCTTGACCACTCTCTTCAGCTATGGATTGCTCTTC
GCCTTCGGTCAGTTTCGAGACTTTTTCAGAAAGATCTTTGATTGGTGGAAAGCCAGCAAT
CTTCAGGGTTACGCGCCGATCTGCTTAGGGCTTGAGGATTTCTACATTCGCAGGCTGTAT
CTTCGTATTCAGGACTGTTTTGGCCGGCCAATATCGAGTGCTCCAGATGCTTGGTTTGAT
GTAGTTGAAAGGTTCTCCAATGACAATAACAAGACACTAAAACGAACCACAAAGATAAGT
AAGTGTCTTAACTTGGGGTCATACAATTACCTTGGATTTGCCGCATCAGATGAATTCTGC
ACACCACGTGTAATCGAGTCTTTGAAGAGGTTTTCCCCAGGTACCTGTAGCACCCGTGTT
GATGGAGGCACCACAACATTGCATAAAGAAGTGGAGGAATGTGTTGCAAACTTTGTTGGA
AAGCCTGCTGCAATAGTCTTTGGCATGGGCTATGTGACAAACTCTGCTATCCTTCCGGTC
CTGATTGGGAAGGGGGGGTTGATAATTAGTGATTCTTTGAACCACAACTCCATTGTCAAT
GGTGCTCGAGGATCAGGAGCTACCGTTCGAGTTTTCCAACACAATATACCATCTCACTTG
GAGAAAGTTTTGAGAGAACAAATTGCTGAGGGACAACCCCGGACACATAGACCATGGAAG
AAGATAATTGTTGTTGTGGAAGGAATATATAGCATGGAAGGGGAACTCTGCAAACTCCCA
GAGATTGTTGCAATCTGCAAGAAATATAAGGTCTGCTCTTCTACTCAAAAGAACTTGCAA
TCCAGTGGTGCATGCTACAGATATGCTAGCATGACTTATAAGGCATATGTTTACTTGGAT
GAGGCACACAGTATTGGAGCAGTTGGGAAAACAGGAAGAGGTGTCTGTGAGCTCTTAGGT
GTGGATACCGCTGATGTGGATATTATGATGGGAACTTTCACAAAATCTTTTGGATCATGT
GGTGGTTATATTGCTGGATCCAAGGAGCTGATTCAATATCTAAAGTACACTTGTCCTGCT
CATCTATATGCAACCTCAATATCACCACCAGCTGCACAACAGATTATATCTTCCATCAAG
GTTATTCTTGGAGAAGATGGCTCTAGTAGAGGGGCTCAGAAATTGGCACGAATACGTGAG
AACAGTAACTTTTTCAGATCAGAACTGCAGAAGATGGGCTTTGAGGTTCTTGGAGATAAT
GATTCTCCTGTAATGCCAATAATGCTTTACAATCCAGCCAAAATTCCTGCCTTTTCGCGG
GAGTGTCTCAAACAGAATGTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTT
TTGGCCAGGGCACGGATCTGCATTTCTGCTTCTCATACCAGGGAAGACCTGATTAAAGGC
TTAGAGGTTATCAGCCGAGTTGGTGACCTAGTGGCCATAAAGTATTTCCCTGCTGAGCCC
AGGAAGCAACAGCTGGAGGAAGGCAGAGTGAAACTGGAGTGA

Peptide Sequence

PEP ID

VIT_17s0000g00500.t01
PEP Infomation

pep chromosome:12X:17:338058:343434:-1 gene:VIT_17s0000g00500 transcript:VIT_17s0000g00500.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MITIPYLTALTTLFSYGLLFAFGQFRDFFRKIFDWWKASNLQGYAPICLGLEDFYIRRLY
LRIQDCFGRPISSAPDAWFDVVERFSNDNNKTLKRTTKISKCLNLGSYNYLGFAASDEFC
TPRVIESLKRFSPGTCSTRVDGGTTTLHKEVEECVANFVGKPAAIVFGMGYVTNSAILPV
LIGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNIPSHLEKVLREQIAEGQPRTHRPWK
KIIVVVEGIYSMEGELCKLPEIVAICKKYKVCSSTQKNLQSSGACYRYASMTYKAYVYLD
EAHSIGAVGKTGRGVCELLGVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPA
HLYATSISPPAAQQIISSIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN
DSPVMPIMLYNPAKIPAFSRECLKQNVAVVTVAFPATPLLLARARICISASHTREDLIKG
LEVISRVGDLVAIKYFPAEPRKQQLEEGRVKLE

Transcript Sequence

Transcript ID

VIT_17s0000g00500.t01
Transcript Infomation

cdna chromosome:12X:17:338058:343434:-1 gene:VIT_17s0000g00500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGAGCTTTGAATGAAGTGATTGATCGAAATGATTACCATTCCATATTTGACCGCCTTGAC
CACTCTCTTCAGCTATGGATTGCTCTTCGCCTTCGGTCAGTTTCGAGACTTTTTCAGAAA
GATCTTTGATTGGTGGAAAGCCAGCAATCTTCAGGGTTACGCGCCGATCTGCTTAGGGCT
TGAGGATTTCTACATTCGCAGGCTGTATCTTCGTATTCAGGACTGTTTTGGCCGGCCAAT
ATCGAGTGCTCCAGATGCTTGGTTTGATGTAGTTGAAAGGTTCTCCAATGACAATAACAA
GACACTAAAACGAACCACAAAGATAAGTAAGTGTCTTAACTTGGGGTCATACAATTACCT
TGGATTTGCCGCATCAGATGAATTCTGCACACCACGTGTAATCGAGTCTTTGAAGAGGTT
TTCCCCAGGTACCTGTAGCACCCGTGTTGATGGAGGCACCACAACATTGCATAAAGAAGT
GGAGGAATGTGTTGCAAACTTTGTTGGAAAGCCTGCTGCAATAGTCTTTGGCATGGGCTA
TGTGACAAACTCTGCTATCCTTCCGGTCCTGATTGGGAAGGGGGGGTTGATAATTAGTGA
TTCTTTGAACCACAACTCCATTGTCAATGGTGCTCGAGGATCAGGAGCTACCGTTCGAGT
TTTCCAACACAATATACCATCTCACTTGGAGAAAGTTTTGAGAGAACAAATTGCTGAGGG
ACAACCCCGGACACATAGACCATGGAAGAAGATAATTGTTGTTGTGGAAGGAATATATAG
CATGGAAGGGGAACTCTGCAAACTCCCAGAGATTGTTGCAATCTGCAAGAAATATAAGGT
CTGCTCTTCTACTCAAAAGAACTTGCAATCCAGTGGTGCATGCTACAGATATGCTAGCAT
GACTTATAAGGCATATGTTTACTTGGATGAGGCACACAGTATTGGAGCAGTTGGGAAAAC
AGGAAGAGGTGTCTGTGAGCTCTTAGGTGTGGATACCGCTGATGTGGATATTATGATGGG
AACTTTCACAAAATCTTTTGGATCATGTGGTGGTTATATTGCTGGATCCAAGGAGCTGAT
TCAATATCTAAAGTACACTTGTCCTGCTCATCTATATGCAACCTCAATATCACCACCAGC
TGCACAACAGATTATATCTTCCATCAAGGTTATTCTTGGAGAAGATGGCTCTAGTAGAGG
GGCTCAGAAATTGGCACGAATACGTGAGAACAGTAACTTTTTCAGATCAGAACTGCAGAA
GATGGGCTTTGAGGTTCTTGGAGATAATGATTCTCCTGTAATGCCAATAATGCTTTACAA
TCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATGTTGCTGTTGTGAC
AGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGGGCACGGATCTGCATTTCTGCTTC
TCATACCAGGGAAGACCTGATTAAAGGCTTAGAGGTTATCAGCCGAGTTGGTGACCTAGT
GGCCATAAAGTATTTCCCTGCTGAGCCCAGGAAGCAACAGCTGGAGGAAGGCAGAGTGAA
ACTGGAGTGAAAGATTAAGAAAACAGTGGGGTGCAACTGTTTAGCCTCCGAAAGGAGATC
TAGCTTTGATCTAACTACTGGTAAAATATCATTATCAGCTTTGATGTTTGTCATTCTTTT
TTTAAAAACGAAGACAGAAAAGATCGGGGACTATCTGTCTTTGTTATCTATTCATATGGG
TTTTGAGAGTTCCTCCTTGTTAATATCATTACCCTTCAAAGGTGAACCTTTGCAGTGTCT
TTTCTAGGTCTGGAAGCTATGTGTTTTACCATGAGATTTTGATCTTTGTATGTAAAATTG
CTGCTATAATTCCTTCAATATGATTATGTAATC