Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g00480.t01
CDS Infomation

cds chromosome:12X:17:321591:329949:1 gene:VIT_17s0000g00480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGGCTCTTACAGTTTGGTTTAATACTCGCTTTAGCATCTGGATTTGCTGCAATTATC
ATATACATTAATGGACTTGCCAATATATATGAGAAGTCTCTGCTTTCGGATGAAGATTTA
GGAGCATTGGAGTCTCTACAGAGTGGCTTCCAGAAGTGTGTGAGTTCAAATGGATTAGGT
TTACAAGCTGCACGTGGTAGAGATTATTGCCAAGTTACAATAAAATTTCCTAGTGATACT
GTCCCCAAATGGAAAGATCCCAAAACCGGAGAACTTGAAGGGTTATCATTTGATTTTAAT
CTCTGTGAAGCAGTGGCTACATGGGAGCAGGTGCGGAATAGTACCACAATACTCACCAAG
GAGTTTATTGATGCTTTACCAAATGGATGGACAGATTATGCATGGCGTAGGATTAATAAG
GGAATACTCCTCAACAACTGCAAGAATAAGACACTTTGCATGGAGAAACTTTCTCTGGTA
CTCCCTGAAACACCACCATATTTTCCACGGCAGTTTGATCGATGTGCAGTTATTGGTAAC
TCAGGAGATCTTCTGAAAACAAGGTTTGGGAAGGAAATAGATGGCTATGATGCTGTTATT
AGAGAAAACGGTGCACCAATTGAGAACTATACAGCGTATGTGGGCAAGAAAAGTACATTC
CGTCTTCTTAATAGAGGATCTGCAAAAGCTCTTGATAAAGTTGTAGAGTTAGATGAAACA
AGAAAGGAGGCCTTAATCATCAAAACAACAGTTCATGACATTATGAACAAGATGATTCAG
GAAGTTCCAATACATAATCCTGTATATCTCATGCTAGGTGCATCCTTTGGGTCAGCAGCA
AAAGGAACTGGGCTCAAGGCTCTTGAGTTTGCTCTGTCTATTTGTGAATCAGTAGATATG
TATGGCTTTACAGTGGATCCGGGTTATAAAGAATGGACCAGATATTTCTCAGAATCTCGT
CAAGGGCATACTCCTCTGCACGGCAGGGCTTACTACCAGATGATGGAGTGTTTGGGTCTT
ATCAAAATCCATTCTCCTATGCGAGCTGATCCTAACCGGATCGTGACGTATGTACCAAGT
CATAGTACAGTGACTGCTGCTAGAACTGCATCGGAGAAATTGTTGAGGAGGGTCGGGGCA
GGATCTGGAGAACCACTGCATGCATGTTCAATTATTAAGAAGCAACTTCAAAGAGAGCCC
ATAGGCATTTCAAGCATTAGAAAGGCTGCTGTTGACCATAAAAATTTTGTGAAAGGTGCA
ACTATGTATCCCTTGGAGCACAGTCCTGGCCATGGTCTACTATGCACGGTGCCCAACTGA

Peptide Sequence

PEP ID

VIT_17s0000g00480.t01
PEP Infomation

pep chromosome:12X:17:321591:329949:1 gene:VIT_17s0000g00480 transcript:VIT_17s0000g00480.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRLLQFGLILALASGFAAIIIYINGLANIYEKSLLSDEDLGALESLQSGFQKCVSSNGLG
LQAARGRDYCQVTIKFPSDTVPKWKDPKTGELEGLSFDFNLCEAVATWEQVRNSTTILTK
EFIDALPNGWTDYAWRRINKGILLNNCKNKTLCMEKLSLVLPETPPYFPRQFDRCAVIGN
SGDLLKTRFGKEIDGYDAVIRENGAPIENYTAYVGKKSTFRLLNRGSAKALDKVVELDET
RKEALIIKTTVHDIMNKMIQEVPIHNPVYLMLGASFGSAAKGTGLKALEFALSICESVDM
YGFTVDPGYKEWTRYFSESRQGHTPLHGRAYYQMMECLGLIKIHSPMRADPNRIVTYVPS
HSTVTAARTASEKLLRRVGAGSGEPLHACSIIKKQLQREPIGISSIRKAAVDHKNFVKGA
TMYPLEHSPGHGLLCTVPN

Transcript Sequence

Transcript ID

VIT_17s0000g00480.t01
Transcript Infomation

cdna chromosome:12X:17:321591:329949:1 gene:VIT_17s0000g00480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGAGAGAGTTATTAGGGTTTAATATTTTTCATGAATCTAGATTTGAAGATTTTCAGTTCT
GAGTGTTGCCCTAACAATTGTGTTTTTCTCGATTCTCACATCACCATCAGCAGAGACGAT
CAGAAGATCTAATTTGCATCTAAGTCTGAGTGACTGACAACACGGATAGCAGATTGGTGG
GTTCACTTCTCTGGAGTTTGTTTCAGATTCACATGCCGAATATTTCTCTTTCGCAACACC
TTCAGTAGAAAAGCTATATATTTTCATAGCTTATTTACGGGAATTCATTAAATGAGGCTC
TTACAGTTTGGTTTAATACTCGCTTTAGCATCTGGATTTGCTGCAATTATCATATACATT
AATGGACTTGCCAATATATATGAGAAGTCTCTGCTTTCGGATGAAGATTTAGGAGCATTG
GAGTCTCTACAGAGTGGCTTCCAGAAGTGTGTGAGTTCAAATGGATTAGGTTTACAAGCT
GCACGTGGTAGAGATTATTGCCAAGTTACAATAAAATTTCCTAGTGATACTGTCCCCAAA
TGGAAAGATCCCAAAACCGGAGAACTTGAAGGGTTATCATTTGATTTTAATCTCTGTGAA
GCAGTGGCTACATGGGAGCAGGTGCGGAATAGTACCACAATACTCACCAAGGAGTTTATT
GATGCTTTACCAAATGGATGGACAGATTATGCATGGCGTAGGATTAATAAGGGAATACTC
CTCAACAACTGCAAGAATAAGACACTTTGCATGGAGAAACTTTCTCTGGTACTCCCTGAA
ACACCACCATATTTTCCACGGCAGTTTGATCGATGTGCAGTTATTGGTAACTCAGGAGAT
CTTCTGAAAACAAGGTTTGGGAAGGAAATAGATGGCTATGATGCTGTTATTAGAGAAAAC
GGTGCACCAATTGAGAACTATACAGCGTATGTGGGCAAGAAAAGTACATTCCGTCTTCTT
AATAGAGGATCTGCAAAAGCTCTTGATAAAGTTGTAGAGTTAGATGAAACAAGAAAGGAG
GCCTTAATCATCAAAACAACAGTTCATGACATTATGAACAAGATGATTCAGGAAGTTCCA
ATACATAATCCTGTATATCTCATGCTAGGTGCATCCTTTGGGTCAGCAGCAAAAGGAACT
GGGCTCAAGGCTCTTGAGTTTGCTCTGTCTATTTGTGAATCAGTAGATATGTATGGCTTT
ACAGTGGATCCGGGTTATAAAGAATGGACCAGATATTTCTCAGAATCTCGTCAAGGGCAT
ACTCCTCTGCACGGCAGGGCTTACTACCAGATGATGGAGTGTTTGGGTCTTATCAAAATC
CATTCTCCTATGCGAGCTGATCCTAACCGGATCGTGACGTATGTACCAAGTCATAGTACA
GTGACTGCTGCTAGAACTGCATCGGAGAAATTGTTGAGGAGGGTCGGGGCAGGATCTGGA
GAACCACTGCATGCATGTTCAATTATTAAGAAGCAACTTCAAAGAGAGCCCATAGGCATT
TCAAGCATTAGAAAGGCTGCTGTTGACCATAAAAATTTTGTGAAAGGTGCAACTATGTAT
CCCTTGGAGCACAGTCCTGGCCATGGTCTACTATGCACGGTGCCCAACTGATTGAATCTA
TGGAAGTTTGACATGGTCTGCCTCAGGTCCGATAGATTGAATTCACAGGAATTGATTTCA
AGGTCAAAATACAAGGAACACCAGCCAATGGTCAAGAAACGAGAAGTGTGCATCAAATTT
TTGTTCAAAGTGCATTCTTTTATCAAACTGCTAGTTTCCCCAGTCTCAGAAGGCAAATGA
AGGTCAAGATTAGAAGCAAAAATTTGTTTCAAGTGTAGCTAGCCTTGTTATATTTGTCAG
TGTCAGCAATTTTGAAACATAACCCTTAACCTTTATCTGTAAGATTCTTCCACAATGGTT
GTTAGAATGCAACTCTTGAGATCAACTATTTTCTGAGGCATA