Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g00460.t01
CDS Infomation

cds chromosome:12X:17:309467:318791:-1 gene:VIT_17s0000g00460 gene_biotype:protein_coding transcript_biotype:protein_coding description:V-type proton ATPase subunit C [Source:UniProtKB/TrEMBL;Acc:D7SH58]
Sequence

ATGGCGACTAGGTACTGGGTCGTCTCCCTCCCCGTTCCGACCTCTGCATCGTCTCTATGG
AGTCGCCTTCAGGAATCCATCTCCAAACACTCCTTCGACACTCCTCTCTACAGGTTCAAT
ACTCCGGATCTTCGCGTTGGAACTCTCGATTCTCTTCTGTCTCTCAGTGACGATCTTCTG
AAGTCGAATAGCTTTGTCGAGGGAGTGACTCACAAGATACGGCGTCAGATCGAGGAGTTG
GAGAGGGGTTCGGGCGGTGAGAGTAATGCTTTGACAGTGGATGGGGTTCCTGTTGATTCC
TACTTGACGAGGTTCGTGTGGGATGAGGCGAAGTACCCTACAATGTCTCCTCTCAGGGAG
ATTGTGGATGGCATTCATGTACAAGTAGCTAAGATTGAGGATGATCTTAAGGTTCGTGTT
GCTGAGTATAACAATGTACGCAGTCAGCTTAATGCCATAAACAGAAAGCAAACTGGAAGC
TTAGCTGTACGTGATCTGTCCAACTTAGTGAAGCCGGAGGATATTATTACTTCAGAACAC
TTGGTGACGCTCCTTGCTGTTGTTCCTAAGTATTCACAGAAGGATTGGTTATCAACCTAT
GAAACACTTGCCACCTATGTGGTCCCCAGGTCATCCAAGAAGTTGCACGAGGACAATGAA
TATGCTCTCTATACTGTAACTATATTTGGTCGTGTTGCTGACAATTTTAAGACTAGCGCA
CGAGAGAGAGGTTTTCAAATTCGTGATTTTGAATATAGTCCAGAAACACAAGAGAGTAGG
AAGCAGGAGTTGGAAAAACTGATGCTAGATCAGGACACGATTAGAACCTCTCTTTTGCAA
TGGTGCTATACCAGTTATGGGGAGGTCTTCAGCTCCTGGATGCACTTTTGTGCTGTACGT
GTCTTTGCAGAGAGCATTCTGAGATATGGATTGCCACCATCTTTCTTATCAGTGGTATTG
GCACCTTCTGTTAAAAGCGAAAAGAAAGCACGCTCAATCCTAGAAGGTCTGTCTGACAGT
GCTAACAGCACATATTGGAAATCCGAAGATGAACTTGGAGGTATGGGCAGCCTAGGAGGT
GATGCTGATTCTCATCCTTACGTCTCCTTCACCATAAATCTGGTCTGA

Peptide Sequence

PEP ID

VIT_17s0000g00460.t01
PEP Infomation

pep chromosome:12X:17:309467:318791:-1 gene:VIT_17s0000g00460 transcript:VIT_17s0000g00460.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:V-type proton ATPase subunit C [Source:UniProtKB/TrEMBL;Acc:D7SH58]
Sequence

MATRYWVVSLPVPTSASSLWSRLQESISKHSFDTPLYRFNTPDLRVGTLDSLLSLSDDLL
KSNSFVEGVTHKIRRQIEELERGSGGESNALTVDGVPVDSYLTRFVWDEAKYPTMSPLRE
IVDGIHVQVAKIEDDLKVRVAEYNNVRSQLNAINRKQTGSLAVRDLSNLVKPEDIITSEH
LVTLLAVVPKYSQKDWLSTYETLATYVVPRSSKKLHEDNEYALYTVTIFGRVADNFKTSA
RERGFQIRDFEYSPETQESRKQELEKLMLDQDTIRTSLLQWCYTSYGEVFSSWMHFCAVR
VFAESILRYGLPPSFLSVVLAPSVKSEKKARSILEGLSDSANSTYWKSEDELGGMGSLGG
DADSHPYVSFTINLV

Transcript Sequence

Transcript ID

VIT_17s0000g00460.t01
Transcript Infomation

cdna chromosome:12X:17:309467:318791:-1 gene:VIT_17s0000g00460 gene_biotype:protein_coding transcript_biotype:protein_coding description:V-type proton ATPase subunit C [Source:UniProtKB/TrEMBL;Acc:D7SH58]
Sequence

TAATAATGGCGACTAGGTACTGGGTCGTCTCCCTCCCCGTTCCGACCTCTGCATCGTCTC
TATGGAGTCGCCTTCAGGAATCCATCTCCAAACACTCCTTCGACACTCCTCTCTACAGGT
TCAATACTCCGGATCTTCGCGTTGGAACTCTCGATTCTCTTCTGTCTCTCAGTGACGATC
TTCTGAAGTCGAATAGCTTTGTCGAGGGAGTGACTCACAAGATACGGCGTCAGATCGAGG
AGTTGGAGAGGGGTTCGGGCGGTGAGAGTAATGCTTTGACAGTGGATGGGGTTCCTGTTG
ATTCCTACTTGACGAGGTTCGTGTGGGATGAGGCGAAGTACCCTACAATGTCTCCTCTCA
GGGAGATTGTGGATGGCATTCATGTACAAGTAGCTAAGATTGAGGATGATCTTAAGGTTC
GTGTTGCTGAGTATAACAATGTACGCAGTCAGCTTAATGCCATAAACAGAAAGCAAACTG
GAAGCTTAGCTGTACGTGATCTGTCCAACTTAGTGAAGCCGGAGGATATTATTACTTCAG
AACACTTGGTGACGCTCCTTGCTGTTGTTCCTAAGTATTCACAGAAGGATTGGTTATCAA
CCTATGAAACACTTGCCACCTATGTGGTCCCCAGGTCATCCAAGAAGTTGCACGAGGACA
ATGAATATGCTCTCTATACTGTAACTATATTTGGTCGTGTTGCTGACAATTTTAAGACTA
GCGCACGAGAGAGAGGTTTTCAAATTCGTGATTTTGAATATAGTCCAGAAACACAAGAGA
GTAGGAAGCAGGAGTTGGAAAAACTGATGCTAGATCAGGACACGATTAGAACCTCTCTTT
TGCAATGGTGCTATACCAGTTATGGGGAGGTCTTCAGCTCCTGGATGCACTTTTGTGCTG
TACGTGTCTTTGCAGAGAGCATTCTGAGATATGGATTGCCACCATCTTTCTTATCAGTGG
TATTGGCACCTTCTGTTAAAAGCGAAAAGAAAGCACGCTCAATCCTAGAAGGTCTGTCTG
ACAGTGCTAACAGCACATATTGGAAATCCGAAGATGAACTTGGAGGTATGGGCAGCCTAG
GAGGTGATGCTGATTCTCATCCTTACGTCTCCTTCACCATAAATCTGGTCTGAGCATAAT
CATTCCCCTGTCACCATCCATTTAAAATCCCATGTTCGGTTTCATCAGCCTGCGATAATG
TCAGAGATTGGAGTTATTGTATAGCAGCCTAAATTACCTGATTTTTTTAGCTTAGTTAAT
GTTCACTGCTTATCTTTCCTTGCAAAATCTAG