Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g00310.t01
CDS Infomation

cds chromosome:12X:17:201292:212911:1 gene:VIT_17s0000g00310 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGCTGGCCAAACTTGACGATTCTCCCATGCTTCGCAACCAAATTGAGTGCTTGGAG
GAGAATGCTGAGTCATTGAAGGAAAGAACAATGAAGTTCTACAAAGGCTGCCGAAAGTAC
GCAGAAGGACTTGGAGAGGGATACAATGGAGATGTTGCTTTTGCAAACGCCCTTGAAGCC
TTTGGAGGCTGCCATAATGATCCTCTTAGTGTTGCTTTTGGGGACTCTGTTGTCAAAAAA
TTCACAGGTGCTTTGAGAGAAATTGGGACATACAAGGAAACCCTTCGGGCAGAGGTAGAG
CACGTTCTAACTGATAGGTTGCTACACTTTGTTGATGTTGATCTGCATGATGTCAAGGAA
GCCCGAAAACGTTTTGACAAGGCTATCCCTATGTATGACCAGGCACGTGAGAAATTTCTA
TCATTAAGGAAAAGTACTAGAATGGATATAGCTCAAGCCACAGAGGAGGAACTTCACAAT
GCAAGGTCCATATTTGAGCAAGCCCGGTTCAATCTGGTCAGTGCTATCTCTAATGTCGAG
GCAAAAAAGAGGTTTGAGTTTTTGGAGGCTGTCAGTGTAACAATGGCTGCACATCTTCGT
TTCTTCAGACAGGGATATGAGCTATTGAATCAGATGGAGCCTTATATTAACCAGGTCTTG
GGTTATGCACAACAGTCAAGGGAAAGTTCCAACTATGAGCAAGCATCTCTTATTGAAAAA
ATGCAAGACTACATAAGGCAAATTGATTACAAAAGTAAACTGGCTCTAAATGGATCTTAT
GCTTCTCCCAATGATGTTGGTATGCAACCTTTCAATAGAAAATCGCATAAAGAGATAGAA
GCAGTTATGCAATCTGCTGCAAAGGGAAAGGTTCAAACCATTCGACAAGGATATCTTTCA
AAACGTTCCTCAAATTTGAGGGGTGACTGGAAGAGAAGGTTCTTTGTTCTTGATAGCCGA
GGCATGTTGTACTACTATCGCAAACAATGGAACAGGTCATTTGTAAGTCATTATCTGGAA
GACATTTTTCAACATTCCAATGAGCCTGGTTCTGGGCTGCTGAGTCGCTGGCTATCTTCT
CATTACCATGGTGGTGTACATGATGAGAAATCTGTCACACAGCACACTGTGAACTTACTG
ACAGCAACAATAAAGCTTGATGCAGATCAGTCAGATTTGAGGTTCTGCTTCAGGATCATT
TCACCAACAAAGAACTATACTTTGCAGGCAGAGAATGCACTGGATCAAATGGACTGGGTT
GAAAAGATAACTGGAGTAATAGCTTCTTTGTTGAGTTCCGACGCACTTGAAAGGCGTCTC
TCTGGTTCTTCAACTGGAAGCAGCGATCAACAGCCTGCTAACCAAAGTTGTTCACCAGGA
AGTTCATCTCATTTGGATCAGACTGTAATTGAAGAGCATGCGTCTAAGAATCTTACTTCT
GGAAACTATGCGCGTGCATCTAGAAGTCTGCAACAGCGAAAATGCAGTGGAAAAAATGAG
AAGCCAATTGATGTGTTGAGAAGAGTACGTGGGAATGACAAATGTGCTGATTGTGGTGCA
CCTGAACCTGATTGGGCATCCTTAAATCTGGGTGTTCTTATCTGCATCGAATGCTCTGGC
ATTCACCGTAATCTTGGTGTGCATATATCAAAGGTTAGATCACTGGTACTTGATGTAAAA
GTGTGGGAACCTTCTGTTCTGACATTGTTCCTGGCACTGGGTAATAACTACGCAAATTCA
ATCTGGGAGGACTTGTTGAATCCTGATGATACGCCTGTGGATTCCCCGACATCTGATAAA
TCCAAGCTGTCGCTTATGAGCAAACCTGGTCATGATGATCCTATTTCAGTAAAGGAGATT
TTCATTCATGCAAAGTATGCAGAAAAACGTTTTGTTCGCAAGATAAAGGACAGTCAGCAT
CTTCATTCAATTGCACAAAAAATGTGCAGAAGTGTGCGTTATAATGACACGAAAGCAGTT
TACCGCAATATTGTCAGTTCTGAAGTTGATGTCAATGCTATCCATGGGAAAGCATCATCT
AACACGTTCTTAACTCTAGCTGAAGTAATGAAGTTGCAAGAGCAGGTCAGCGTCGATAAT
AAATTTGATTTCTTAGTAGATAGTTCTTTGGGTAAGGCGTCCTCAAGCTCTTCAGACAAA
CCCAGTACAACCGAAGATCAGTCCATGGAGGGGTGTCATGATGGTTGTTCGCTACTTCAC
CTTGCATGCCAAGCTGCAGACATTGGTATGGTGGAGCTACTTCTACAGTATGGAGCAGAC
ATAAATGCTTCTGATTCTATGGGTCAGACCCCTCTGCATCATTGCATCATCAGAGGGAGA
ACTGCAATTGCAAAAATACTGCTGAAAAGGGGAGCTGATCCACAAGCTGTAGACAAGGAA
GGTAAAACCCCTCTTCGGCTCGTAGCTGAATCAACCATTGATGACAGCGAGGTCCTAGCA
CTCTTAAAGCAAACAAACAGATGA

Peptide Sequence

PEP ID

VIT_17s0000g00310.t01
PEP Infomation

pep chromosome:12X:17:201292:212911:1 gene:VIT_17s0000g00310 transcript:VIT_17s0000g00310.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQLAKLDDSPMLRNQIECLEENAESLKERTMKFYKGCRKYAEGLGEGYNGDVAFANALEA
FGGCHNDPLSVAFGDSVVKKFTGALREIGTYKETLRAEVEHVLTDRLLHFVDVDLHDVKE
ARKRFDKAIPMYDQAREKFLSLRKSTRMDIAQATEEELHNARSIFEQARFNLVSAISNVE
AKKRFEFLEAVSVTMAAHLRFFRQGYELLNQMEPYINQVLGYAQQSRESSNYEQASLIEK
MQDYIRQIDYKSKLALNGSYASPNDVGMQPFNRKSHKEIEAVMQSAAKGKVQTIRQGYLS
KRSSNLRGDWKRRFFVLDSRGMLYYYRKQWNRSFVSHYLEDIFQHSNEPGSGLLSRWLSS
HYHGGVHDEKSVTQHTVNLLTATIKLDADQSDLRFCFRIISPTKNYTLQAENALDQMDWV
EKITGVIASLLSSDALERRLSGSSTGSSDQQPANQSCSPGSSSHLDQTVIEEHASKNLTS
GNYARASRSLQQRKCSGKNEKPIDVLRRVRGNDKCADCGAPEPDWASLNLGVLICIECSG
IHRNLGVHISKVRSLVLDVKVWEPSVLTLFLALGNNYANSIWEDLLNPDDTPVDSPTSDK
SKLSLMSKPGHDDPISVKEIFIHAKYAEKRFVRKIKDSQHLHSIAQKMCRSVRYNDTKAV
YRNIVSSEVDVNAIHGKASSNTFLTLAEVMKLQEQVSVDNKFDFLVDSSLGKASSSSSDK
PSTTEDQSMEGCHDGCSLLHLACQAADIGMVELLLQYGADINASDSMGQTPLHHCIIRGR
TAIAKILLKRGADPQAVDKEGKTPLRLVAESTIDDSEVLALLKQTNR

Transcript Sequence

Transcript ID

VIT_17s0000g00310.t01
Transcript Infomation

cdna chromosome:12X:17:201292:212911:1 gene:VIT_17s0000g00310 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGCTGGCCAAACTTGACGATTCTCCCATGCTTCGCAACCAAATTGAGTGCTTGGAG
GAGAATGCTGAGTCATTGAAGGAAAGAACAATGAAGTTCTACAAAGGCTGCCGAAAGTAC
GCAGAAGGACTTGGAGAGGGATACAATGGAGATGTTGCTTTTGCAAACGCCCTTGAAGCC
TTTGGAGGCTGCCATAATGATCCTCTTAGTGTTGCTTTTGGGGACTCTGTTGTCAAAAAA
TTCACAGGTGCTTTGAGAGAAATTGGGACATACAAGGAAACCCTTCGGGCAGAGGTAGAG
CACGTTCTAACTGATAGGTTGCTACACTTTGTTGATGTTGATCTGCATGATGTCAAGGAA
GCCCGAAAACGTTTTGACAAGGCTATCCCTATGTATGACCAGGCACGTGAGAAATTTCTA
TCATTAAGGAAAAGTACTAGAATGGATATAGCTCAAGCCACAGAGGAGGAACTTCACAAT
GCAAGGTCCATATTTGAGCAAGCCCGGTTCAATCTGGTCAGTGCTATCTCTAATGTCGAG
GCAAAAAAGAGGTTTGAGTTTTTGGAGGCTGTCAGTGTAACAATGGCTGCACATCTTCGT
TTCTTCAGACAGGGATATGAGCTATTGAATCAGATGGAGCCTTATATTAACCAGGTCTTG
GGTTATGCACAACAGTCAAGGGAAAGTTCCAACTATGAGCAAGCATCTCTTATTGAAAAA
ATGCAAGACTACATAAGGCAAATTGATTACAAAAGTAAACTGGCTCTAAATGGATCTTAT
GCTTCTCCCAATGATGTTGGTATGCAACCTTTCAATAGAAAATCGCATAAAGAGATAGAA
GCAGTTATGCAATCTGCTGCAAAGGGAAAGGTTCAAACCATTCGACAAGGATATCTTTCA
AAACGTTCCTCAAATTTGAGGGGTGACTGGAAGAGAAGGTTCTTTGTTCTTGATAGCCGA
GGCATGTTGTACTACTATCGCAAACAATGGAACAGGTCATTTGTAAGTCATTATCTGGAA
GACATTTTTCAACATTCCAATGAGCCTGGTTCTGGGCTGCTGAGTCGCTGGCTATCTTCT
CATTACCATGGTGGTGTACATGATGAGAAATCTGTCACACAGCACACTGTGAACTTACTG
ACAGCAACAATAAAGCTTGATGCAGATCAGTCAGATTTGAGGTTCTGCTTCAGGATCATT
TCACCAACAAAGAACTATACTTTGCAGGCAGAGAATGCACTGGATCAAATGGACTGGGTT
GAAAAGATAACTGGAGTAATAGCTTCTTTGTTGAGTTCCGACGCACTTGAAAGGCGTCTC
TCTGGTTCTTCAACTGGAAGCAGCGATCAACAGCCTGCTAACCAAAGTTGTTCACCAGGA
AGTTCATCTCATTTGGATCAGACTGTAATTGAAGAGCATGCGTCTAAGAATCTTACTTCT
GGAAACTATGCGCGTGCATCTAGAAGTCTGCAACAGCGAAAATGCAGTGGAAAAAATGAG
AAGCCAATTGATGTGTTGAGAAGAGTACGTGGGAATGACAAATGTGCTGATTGTGGTGCA
CCTGAACCTGATTGGGCATCCTTAAATCTGGGTGTTCTTATCTGCATCGAATGCTCTGGC
ATTCACCGTAATCTTGGTGTGCATATATCAAAGGTTAGATCACTGGTACTTGATGTAAAA
GTGTGGGAACCTTCTGTTCTGACATTGTTCCTGGCACTGGGTAATAACTACGCAAATTCA
ATCTGGGAGGACTTGTTGAATCCTGATGATACGCCTGTGGATTCCCCGACATCTGATAAA
TCCAAGCTGTCGCTTATGAGCAAACCTGGTCATGATGATCCTATTTCAGTAAAGGAGATT
TTCATTCATGCAAAGTATGCAGAAAAACGTTTTGTTCGCAAGATAAAGGACAGTCAGCAT
CTTCATTCAATTGCACAAAAAATGTGCAGAAGTGTGCGTTATAATGACACGAAAGCAGTT
TACCGCAATATTGTCAGTTCTGAAGTTGATGTCAATGCTATCCATGGGAAAGCATCATCT
AACACGTTCTTAACTCTAGCTGAAGTAATGAAGTTGCAAGAGCAGGTCAGCGTCGATAAT
AAATTTGATTTCTTAGTAGATAGTTCTTTGGGTAAGGCGTCCTCAAGCTCTTCAGACAAA
CCCAGTACAACCGAAGATCAGTCCATGGAGGGGTGTCATGATGGTTGTTCGCTACTTCAC
CTTGCATGCCAAGCTGCAGACATTGGTATGGTGGAGCTACTTCTACAGTATGGAGCAGAC
ATAAATGCTTCTGATTCTATGGGTCAGACCCCTCTGCATCATTGCATCATCAGAGGGAGA
ACTGCAATTGCAAAAATACTGCTGAAAAGGGGAGCTGATCCACAAGCTGTAGACAAGGAA
GGTAAAACCCCTCTTCGGCTCGTAGCTGAATCAACCATTGATGACAGCGAGGTCCTAGCA
CTCTTAAAGCAAACAAACAGATGA