Gene sequences

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SNP Detection
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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_17s0000g00300.t01
CDS Infomation	cds chromosome:12X:17:191926:199990:1 gene:VIT_17s0000g00300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Signal recognition particle subunit SRP68 [Source:UniProtKB/TrEMBL;Acc:A5BG91]
Sequence	ATGGGGAAAGAAAACCAAGTGTCTGATATGCAAATCGACGATCAAAAATCGAATTCCGAT CATGCCAACCCCAAATTCTCAATCAATGTGCTGCAGCTCTTGAAGTCTGCGCAAATGCAG CATGGATTACGACATGGTGATTACACGCGCTACCGGAGGTATTGCACTGCTCGATTGAGG CGGTTGTACAAGTCTCTGAAATTTACTCATGGTCGTGGTAAATACACCCGAAGATCCATT ACCGAATCTACTGTGACAGAAGTGAGGTTTCTGCATCTCATTCTATATACAGCAGAAAGA GCTTGGAGCCATGCCATGGAGAAAAGACAGCTTCCAGATGGTCCAAATGCACGTCAACGG ATCTACCTGATTGGTAGGCTGAGGAAGGCAGTAAAATGGGCTACTCTATTTTCACAATTG TGTGCAATTAAGGGAGATTCCAAAACATCTTTAGAAGCTGAGGCCTATGCCTCCTATATG AAAGGGACTTTGTTGTTTGAACAAGACCAGAATTGGGATATGGCACTAAAACTTTTTAAG AGTTCCAGAGCTGTCTATGAGGAACTTGGGAAATACGGAGACCTGGAGAATCAAGTTTTG TGCCGTGAACGTGTTGAGGAGCTAGAACCAAGTATTCGATATTGCCTCCATAAAATAGGT GCATCAAATTCACTAACTCCTGAACTCCTACACATGGAAGGGCCTGCACTGGATCTTTTC AGAGCTAAATTGGAGGCTGTTATGGCAGAGGCAAGGTCTCAACAGGCTGCATCTATGACA GAGTTTCATTGGCTTGGTCACAGATTTCCAATTTCTAATGCGAAAACTCGGGTTTCCATT TTGAAAGCTCAAGATTTGGAGAAAGATCTTCATGGTCCAGCAGCAGACTCACTTCCAGCA GAGAAAAAACTTGGCATTTTTGACAAAATTTTTACTGCATATCATGAGGCCAGGAGTTCC ATCCGCAATGACTTGGTCACTGCAGGCAGTGCTGGAAACATGAAAGATGACTTAAATGGC CTTGATAAGGCTGTTAGTGCTGTCTTAGGCGAAAGAACCATTGAACGGAACCAGTTGTTG ATTCGCATTGCTAAAAGTAAACTCACTAAGCAAGAAAAAAATGAGAAAGCGACAAAGCCT GAAGAGCTTGTTCGGTTGTATGATCTTTTATTACAGAATGTTGCTGATCTCTCTGATTTA GTTAGTTCTGGAAGAGACAGAAAACCAGAAGAAGTGTCATTTACTGAGGAGTGTGCTCTT AAAAGTTTAGCTTTCCGAGCAGAAAGGTGCTTTTACTTGGCAAAGTCATACAGTTTGGCT GGAAAGAGGACAGAAGCATATGCATTATATAGCCATGCCCGCTCTCTTGCAGATGATGCC CTGCAAAAACTTCAAGCTTCAAGTAACAATGATCAGACTCTGATCAAGGGGTTGAAGATG TTATATAATGACTGTAGATCAAACAGTTGTATAGAGCATGCCACGGTGATTATGGAGGAG GAGAAGGCTCCAGAGAATCTCTCACAGAAAATTTCTAATATATCATTGGCTGGAGCTCAC AAAAAGGTGGAGACGTCTCTGATGGAGAAACTGGATGTCTACGAGTCTCTGGTGGGTGCA TCAAACGTGAAAAGTGTTCCTCGCATTGAAGCCTTCCCACCAGCCTTCCAAACGATCCCT CGCAACCCCATTGTTTTGGACATTGCCTACAATTTTGTTGATTTCCCATCCCTAGAAAAC AGGATGAAGAAAGACAAGAAGGGCTTCATTAGTCGGCTTTGGCGATGA

Peptide Sequence

PEP ID	VIT_17s0000g00300.t01
PEP Infomation	pep chromosome:12X:17:191926:199990:1 gene:VIT_17s0000g00300 transcript:VIT_17s0000g00300.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Signal recognition particle subunit SRP68 [Source:UniProtKB/TrEMBL;Acc:A5BG91]
Sequence	MGKENQVSDMQIDDQKSNSDHANPKFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLR RLYKSLKFTHGRGKYTRRSITESTVTEVRFLHLILYTAERAWSHAMEKRQLPDGPNARQR IYLIGRLRKAVKWATLFSQLCAIKGDSKTSLEAEAYASYMKGTLLFEQDQNWDMALKLFK SSRAVYEELGKYGDLENQVLCRERVEELEPSIRYCLHKIGASNSLTPELLHMEGPALDLF RAKLEAVMAEARSQQAASMTEFHWLGHRFPISNAKTRVSILKAQDLEKDLHGPAADSLPA EKKLGIFDKIFTAYHEARSSIRNDLVTAGSAGNMKDDLNGLDKAVSAVLGERTIERNQLL IRIAKSKLTKQEKNEKATKPEELVRLYDLLLQNVADLSDLVSSGRDRKPEEVSFTEECAL KSLAFRAERCFYLAKSYSLAGKRTEAYALYSHARSLADDALQKLQASSNNDQTLIKGLKM LYNDCRSNSCIEHATVIMEEEKAPENLSQKISNISLAGAHKKVETSLMEKLDVYESLVGA SNVKSVPRIEAFPPAFQTIPRNPIVLDIAYNFVDFPSLENRMKKDKKGFISRLWR

Transcript Sequence

Transcript ID	VIT_17s0000g00300.t01
Transcript Infomation	cdna chromosome:12X:17:191926:199990:1 gene:VIT_17s0000g00300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Signal recognition particle subunit SRP68 [Source:UniProtKB/TrEMBL;Acc:A5BG91]
Sequence	CGCACTGCCTTGGCGGCGTCTCATCTTCTACCTCTGCTTCGGCCCAGCCGCTTCGGTGAA CTCGCCGGAATATTCCTCTATTCTCCCAAACCCTAAATCCAGGACTAATGGGGAAAGAAA ACCAAGTGTCTGATATGCAAATCGACGATCAAAAATCGAATTCCGATCATGCCAACCCCA AATTCTCAATCAATGTGCTGCAGCTCTTGAAGTCTGCGCAAATGCAGCATGGATTACGAC ATGGTGATTACACGCGCTACCGGAGGTATTGCACTGCTCGATTGAGGCGGTTGTACAAGT CTCTGAAATTTACTCATGGTCGTGGTAAATACACCCGAAGATCCATTACCGAATCTACTG TGACAGAAGTGAGGTTTCTGCATCTCATTCTATATACAGCAGAAAGAGCTTGGAGCCATG CCATGGAGAAAAGACAGCTTCCAGATGGTCCAAATGCACGTCAACGGATCTACCTGATTG GTAGGCTGAGGAAGGCAGTAAAATGGGCTACTCTATTTTCACAATTGTGTGCAATTAAGG GAGATTCCAAAACATCTTTAGAAGCTGAGGCCTATGCCTCCTATATGAAAGGGACTTTGT TGTTTGAACAAGACCAGAATTGGGATATGGCACTAAAACTTTTTAAGAGTTCCAGAGCTG TCTATGAGGAACTTGGGAAATACGGAGACCTGGAGAATCAAGTTTTGTGCCGTGAACGTG TTGAGGAGCTAGAACCAAGTATTCGATATTGCCTCCATAAAATAGGTGCATCAAATTCAC TAACTCCTGAACTCCTACACATGGAAGGGCCTGCACTGGATCTTTTCAGAGCTAAATTGG AGGCTGTTATGGCAGAGGCAAGGTCTCAACAGGCTGCATCTATGACAGAGTTTCATTGGC TTGGTCACAGATTTCCAATTTCTAATGCGAAAACTCGGGTTTCCATTTTGAAAGCTCAAG ATTTGGAGAAAGATCTTCATGGTCCAGCAGCAGACTCACTTCCAGCAGAGAAAAAACTTG GCATTTTTGACAAAATTTTTACTGCATATCATGAGGCCAGGAGTTCCATCCGCAATGACT TGGTCACTGCAGGCAGTGCTGGAAACATGAAAGATGACTTAAATGGCCTTGATAAGGCTG TTAGTGCTGTCTTAGGCGAAAGAACCATTGAACGGAACCAGTTGTTGATTCGCATTGCTA AAAGTAAACTCACTAAGCAAGAAAAAAATGAGAAAGCGACAAAGCCTGAAGAGCTTGTTC GGTTGTATGATCTTTTATTACAGAATGTTGCTGATCTCTCTGATTTAGTTAGTTCTGGAA GAGACAGAAAACCAGAAGAAGTGTCATTTACTGAGGAGTGTGCTCTTAAAAGTTTAGCTT TCCGAGCAGAAAGGTGCTTTTACTTGGCAAAGTCATACAGTTTGGCTGGAAAGAGGACAG AAGCATATGCATTATATAGCCATGCCCGCTCTCTTGCAGATGATGCCCTGCAAAAACTTC AAGCTTCAAGTAACAATGATCAGACTCTGATCAAGGGGTTGAAGATGTTATATAATGACT GTAGATCAAACAGTTGTATAGAGCATGCCACGGTGATTATGGAGGAGGAGAAGGCTCCAG AGAATCTCTCACAGAAAATTTCTAATATATCATTGGCTGGAGCTCACAAAAAGGTGGAGA CGTCTCTGATGGAGAAACTGGATGTCTACGAGTCTCTGGTGGGTGCATCAAACGTGAAAA GTGTTCCTCGCATTGAAGCCTTCCCACCAGCCTTCCAAACGATCCCTCGCAACCCCATTG TTTTGGACATTGCCTACAATTTTGTTGATTTCCCATCCCTAGAAAACAGGATGAAGAAAG ACAAGAAGGGCTTCATTAGTCGGCTTTGGCGATGAGGACTGGCAGTGGGTGGGTATTCAC ACCTCACGTCCCATACTTCATTATACAGAAATATGAGGAAGTCTTGTAACAGTGTCCATT GATTAGTGCTTGGTATTCGGTTTTTGAATTTTGGATTACTCGTGCTGAGAAAAAAGTAAG AGTAAAATTTACATTTTTCTGGATATAGATAAGCTTTTGGCCTTTTGGCTTTACTATCTT AGTTGTTGAAATGAGCATGCAATAACCTTCCCAGTTGCCACCCAATTTTTATTTATTTAT TTTGTTTGTTGCTGAGAATTTGGATGTAGGAGACCAAATTTTTCTTAAGAATGGGATAAA AGAGAAAATAGGGAGCTATGGTG