Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_17s0000g00030.t01
CDS Infomation

cds chromosome:12X:17:23971:30566:1 gene:VIT_17s0000g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCCCTTCTCTGCTCTCTATCTCTCAATCTCTCCTCTATCCTGGAATCGCTCCACAA
CCGCGCTCTGGCAACCTTGATCGTCCACACGAAGATTTTGGGGTGGGGAGGATGTCAGGG
GCGGGGCAAGCCGTGGAGCGGGTGGGGTTTGGGAAGATGGAGAAGAGGCGTGCATCTTCA
GACTCAGAGTCAGAAACAGGGTGCTGCAACCCAGTGAGAAAGGGAGGGCCTGTGGGTATG
GACCATGTTCTTTTGGCACTGCAAGAATCCAAGGAAGAGAGGGATGTTCGAATTCGAAGC
CTTTTCAATTTTTTTGACTCGGCCAATCTCGGATATTTGGACTATGCCCAGATCGAGGGT
GGCCTCTCTGCCCTTCAAATTCCTCCTGAGTACAAGTACGCCAAGGATCTTTTAAAGGTA
TGCGATTCCAATAGCGATGGGCGTGTTGATTATCAAGAGTTCCGCCGCTATATGGATGAT
AAAGAACTCGAGCTTTACCGCATCTTCCAAGCTATTGATGTCAAACACAATGGCTGCATT
TTGCCTGAAGAGCTGTGGGATGCCCTTCTCAAGGCTGGGATTGAAATTGACGATGAGGAG
CTTGCCCGTTTTGTGGAAAATGTTGATAAGGATAACAATGGAATTATAACTTTTGAAGAA
TGGAGAGATTTTCTTCTGCTCTATCCCCATGAGGCAACCATAGAAAATATCTATCAGTAC
TGGGGAAGGGTATGCCTTGTAGATATTGGTGAACAGGCTGTTATTCCGGAAGGCATAAGC
AAGCACGTACATGCAAGCAAATATTTGCTTGCTGGGGGAGTAGCAGGAGCTGCTTCTCGT
ACTGCAACTGCTCCTCTTGATCGCCTAAAGGTGGTTTTGCAAGTACAGACTACACATGCT
CGCATTGTTCCAGCCATAAAGAACATATGGAAGGAAGGTGGTTTATTGGGGTTTTTCCGA
GGTAATGGATTAAATGTTGTGAAAGTTGCACCAGAAAGTGCCATCAAGTTTTACACATAT
GAAATGTTTAAAAATGTCGTTAGAGATGCTAAAGGGGAAGCGAAGGATGATATAGGTGCT
GCTGGCAGACTTTTTGCTGGTGGTATGGCAGGTGCTGTGGCACAAACTGCTATTTATCCA
TTAGATCTTGTGAAGACTCGGTTACAGACGTATACTTGTGAAGGTGGAAAGGTTCCTTAT
TTGAAAACACTGGCAAGGAATATATGGTTTCAGGAGGGACCTCAAGGCTTTTATAGAGGT
CTTGTACCATCTGTTCTTGGGATCATACCTTATGCTGGAATTGACCTTGCTGCATATGAG
ACCTTGAAAGATATGTCAAAGACATATCTGCTTCATGATAGTGAACCTGGACCTCTTGTA
CAACTGGGTTCTGGGACAATTTCAGGGGCTCTTGGAGCAACATGTGTTTATCCATTGCAG
GTTATTAGAACAAGAATGCAAGCTCAACGTACTAATACGGATGCTTCTTACAATGGAATG
TCTGATGTATTTCGGAGAACCCTTCAACATGAAGGTTTTAGAGGTTTCTACAAGGGACTC
TTTCCAAATCTTCTCAAAGTTGTGCCATCTGCAAGCATTACATATCTGGTTTATGAAACA
ATGAAAAAAAGTCTAGATCTTGATTAG

Peptide Sequence

PEP ID

VIT_17s0000g00030.t01
PEP Infomation

pep chromosome:12X:17:23971:30566:1 gene:VIT_17s0000g00030 transcript:VIT_17s0000g00030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAPSLLSISQSLLYPGIAPQPRSGNLDRPHEDFGVGRMSGAGQAVERVGFGKMEKRRASS
DSESETGCCNPVRKGGPVGMDHVLLALQESKEERDVRIRSLFNFFDSANLGYLDYAQIEG
GLSALQIPPEYKYAKDLLKVCDSNSDGRVDYQEFRRYMDDKELELYRIFQAIDVKHNGCI
LPEELWDALLKAGIEIDDEELARFVENVDKDNNGIITFEEWRDFLLLYPHEATIENIYQY
WGRVCLVDIGEQAVIPEGISKHVHASKYLLAGGVAGAASRTATAPLDRLKVVLQVQTTHA
RIVPAIKNIWKEGGLLGFFRGNGLNVVKVAPESAIKFYTYEMFKNVVRDAKGEAKDDIGA
AGRLFAGGMAGAVAQTAIYPLDLVKTRLQTYTCEGGKVPYLKTLARNIWFQEGPQGFYRG
LVPSVLGIIPYAGIDLAAYETLKDMSKTYLLHDSEPGPLVQLGSGTISGALGATCVYPLQ
VIRTRMQAQRTNTDASYNGMSDVFRRTLQHEGFRGFYKGLFPNLLKVVPSASITYLVYET
MKKSLDLD

Transcript Sequence

Transcript ID

VIT_17s0000g00030.t01
Transcript Infomation

cdna chromosome:12X:17:23971:30566:1 gene:VIT_17s0000g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCCCTTCTCTGCTCTCTATCTCTCAATCTCTCCTCTATCCTGGAATCGCTCCACAA
CCGCGCTCTGGCAACCTTGATCGTCCACACGAAGATTTTGGGGTGGGGAGGATGTCAGGG
GCGGGGCAAGCCGTGGAGCGGGTGGGGTTTGGGAAGATGGAGAAGAGGCGTGCATCTTCA
GACTCAGAGTCAGAAACAGGGTGCTGCAACCCAGTGAGAAAGGGAGGGCCTGTGGGTATG
GACCATGTTCTTTTGGCACTGCAAGAATCCAAGGAAGAGAGGGATGTTCGAATTCGAAGC
CTTTTCAATTTTTTTGACTCGGCCAATCTCGGATATTTGGACTATGCCCAGATCGAGGGT
GGCCTCTCTGCCCTTCAAATTCCTCCTGAGTACAAGTACGCCAAGGATCTTTTAAAGGTA
TGCGATTCCAATAGCGATGGGCGTGTTGATTATCAAGAGTTCCGCCGCTATATGGATGAT
AAAGAACTCGAGCTTTACCGCATCTTCCAAGCTATTGATGTCAAACACAATGGCTGCATT
TTGCCTGAAGAGCTGTGGGATGCCCTTCTCAAGGCTGGGATTGAAATTGACGATGAGGAG
CTTGCCCGTTTTGTGGAAAATGTTGATAAGGATAACAATGGAATTATAACTTTTGAAGAA
TGGAGAGATTTTCTTCTGCTCTATCCCCATGAGGCAACCATAGAAAATATCTATCAGTAC
TGGGGAAGGGTATGCCTTGTAGATATTGGTGAACAGGCTGTTATTCCGGAAGGCATAAGC
AAGCACGTACATGCAAGCAAATATTTGCTTGCTGGGGGAGTAGCAGGAGCTGCTTCTCGT
ACTGCAACTGCTCCTCTTGATCGCCTAAAGGTGGTTTTGCAAGTACAGACTACACATGCT
CGCATTGTTCCAGCCATAAAGAACATATGGAAGGAAGGTGGTTTATTGGGGTTTTTCCGA
GGTAATGGATTAAATGTTGTGAAAGTTGCACCAGAAAGTGCCATCAAGTTTTACACATAT
GAAATGTTTAAAAATGTCGTTAGAGATGCTAAAGGGGAAGCGAAGGATGATATAGGTGCT
GCTGGCAGACTTTTTGCTGGTGGTATGGCAGGTGCTGTGGCACAAACTGCTATTTATCCA
TTAGATCTTGTGAAGACTCGGTTACAGACGTATACTTGTGAAGGTGGAAAGGTTCCTTAT
TTGAAAACACTGGCAAGGAATATATGGTTTCAGGAGGGACCTCAAGGCTTTTATAGAGGT
CTTGTACCATCTGTTCTTGGGATCATACCTTATGCTGGAATTGACCTTGCTGCATATGAG
ACCTTGAAAGATATGTCAAAGACATATCTGCTTCATGATAGTGAACCTGGACCTCTTGTA
CAACTGGGTTCTGGGACAATTTCAGGGGCTCTTGGAGCAACATGTGTTTATCCATTGCAG
GTTATTAGAACAAGAATGCAAGCTCAACGTACTAATACGGATGCTTCTTACAATGGAATG
TCTGATGTATTTCGGAGAACCCTTCAACATGAAGGTTTTAGAGGTTTCTACAAGGGACTC
TTTCCAAATCTTCTCAAAGTTGTGCCATCTGCAAGCATTACATATCTGGTTTATGAAACA
ATGAAAAAAAGTCTAGATCTTGATTAGGGAATGTAGTAAACGTGCCCAATGGCCACTAAG
ATGATTAAGCATTGGTATTACTGACGATGAAGATAACAAGGCATGAAGATATGAAGATAC
TAAAAATAAGATTACTAATCCAGTAGCTGATACACTGTTCAAATTACATGATAGGTGGTA
ATTACATGTGGGAGCACATGATTTTGTAGTGAAGAATGTTCTGGTTCCACATTTGGCTGA
ACTAATTGTTGAGAAACAAGATTACACTGTGAACTTCTGACTGCCAGGTCCTAGATGGTC
CTTTCCCTTTTCATTGT