Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0148g00260.t01
CDS Infomation

cds chromosome:12X:16:20226506:20230230:1 gene:VIT_16s0148g00260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGCTCAGAGAAACAAAAGTTGTGGCATTAACAGTCTTCCACACTTTCTTGCTTGCA
ATTTGTGCTGCTAATGGAAACCAGACATGCAGGCCTTCTTCTTGTGGAGATATTCAAAAA
ATTAGCAACCCTTTCCGATTGAAAGGTGATCCGTCTGGGTGTGGTGATCCTGACTATGAA
TTGGTCTGCGAAAACAATCGTACTATGGTAAACCTGGAGCATGGGAAATACTATGTTGCC
GATATCAACTACGATAACTACACCATTCGGGTAGTGGATCCAGGGGTGGAAAAGGGCAAC
TGTTTCTCCGCTCCTCTGTATTCCTTGACAAGAGAAATATTCCGTTCGGATAAGAGAGCA
TATTTTTTGAATCCGCATGAAGCGACCAATACCACGGTTTTGATGAACTGCGAGCAGCCA
ATAAGTGATGGCAACTATATTCCTATCACTCCTTGCAACAGAAGCAATGTGACTTCATCT
TCCTCACAAGCATATGTTTATGCACTAGTCGGCGGAGGAGACTCCCTACTGGTGAATGAT
ATTAAGTATTCATGCACCATTAGCAGGACTATTATTACTCAATTCTTGAAGCCCGGCAAT
CTTTCAATGTCAGATTTGCAAGAAATACTTCTTCAGGGGCTCGATATTTCATTCTTGCTC
TTCCGTTGCAAAAGCGAATGCCATATGAAAGGGCCATACTGCGATCTAGATTGGACCAAA
AATACTGTAAAATATCGAAGCACCTTTTCAAGCAACGGTGTGAGAGAAAGATACAACTAC
TGCTACCACTATGAAACTGCACTTTACCTTGGCATGATCATCATCGGGAGGGCCATACCT
GGTATTTTGTGTTTGCTTGTCTATTTAATCTACAAGTTTCGACGAAGACACTTATCATTG
GATGATGGTATTGAAGAATTTCTACATAGCCATAAAAATCTTCAGCGAATCAAATACTCA
TATTCGGAGCTAAAAAAGATGACTCATAATTTTAAGAATAAATTAGGTCAAGGAGGTTTT
GACTCTGTGTACAAAGGAAAACTCCAAAGTGGTCGCATTGTAGCTGTAAAAATGTTAGTT
ATGTCAAAAGCTAATGGGCAAGATTTCATCAATGAAGTTGCTACAATCGGAAGGATTCAT
CATGTTAATGTTGTGAGACTTGTTGGATTTTGTATACAGAGATCAAAATGGGCTCTTGTA
TATGACTTCATGCCGAATGGGTCTCTTGATAAGTTTGTTTTTCTTGACCAAGGAAACAAC
ATTCCCTTGATTTGGGAAAGATTATACAAGATTGCACTTGGAGTGGGACGTGGGATTGAA
TACTTACATCAGGGATGTGACATGCAAATTCTCCATTTTGATATCAAGCCACACAACATT
CTTCTTGATGAAGACTTCACACCAAAAGTTTCAAATTTTGGTCTTGCCAAATTATATTCA
ACAAATGATAGTATTGTATCCATCACTGCTGCTAGAGGAACCTTGGGCTACATTGCTCCT
AAATTGTTCTACAAAAACATTGGAGGTGTATCATTTAAGGCTGATGTTTATAGTTTTGGA
ATGTTGTTATTGGAAATGGTAGGGAAAAGGAAGAATGTTAACACATTTGCAGAACATTCA
AGTCAAATGTATTTCACATCATGGATTTATAATAGATATGATCAAGAAGAGGACATGAAA
ATGGGAGATGCCACTGAGGATGAAAAAAGGTATGTAAGGAAAATGGTGATAGTTGCACTA
TGGTGTATACAAATGAAGCCTATAGATCGTCCTTCAATGAGCCAAGCATTGGAGATGCTT
GAAGGAGAGGTTGAACTCTCGAAAATGCCTCCTAAGCCAACTCTATGGTCTATTGATAAT
CATGAGCAATTCATGGTAGAGGCATCAACTTCATAA

Peptide Sequence

PEP ID

VIT_16s0148g00260.t01
PEP Infomation

pep chromosome:12X:16:20226506:20230230:1 gene:VIT_16s0148g00260 transcript:VIT_16s0148g00260.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MMLRETKVVALTVFHTFLLAICAANGNQTCRPSSCGDIQKISNPFRLKGDPSGCGDPDYE
LVCENNRTMVNLEHGKYYVADINYDNYTIRVVDPGVEKGNCFSAPLYSLTREIFRSDKRA
YFLNPHEATNTTVLMNCEQPISDGNYIPITPCNRSNVTSSSSQAYVYALVGGGDSLLVND
IKYSCTISRTIITQFLKPGNLSMSDLQEILLQGLDISFLLFRCKSECHMKGPYCDLDWTK
NTVKYRSTFSSNGVRERYNYCYHYETALYLGMIIIGRAIPGILCLLVYLIYKFRRRHLSL
DDGIEEFLHSHKNLQRIKYSYSELKKMTHNFKNKLGQGGFDSVYKGKLQSGRIVAVKMLV
MSKANGQDFINEVATIGRIHHVNVVRLVGFCIQRSKWALVYDFMPNGSLDKFVFLDQGNN
IPLIWERLYKIALGVGRGIEYLHQGCDMQILHFDIKPHNILLDEDFTPKVSNFGLAKLYS
TNDSIVSITAARGTLGYIAPKLFYKNIGGVSFKADVYSFGMLLLEMVGKRKNVNTFAEHS
SQMYFTSWIYNRYDQEEDMKMGDATEDEKRYVRKMVIVALWCIQMKPIDRPSMSQALEML
EGEVELSKMPPKPTLWSIDNHEQFMVEASTS

Transcript Sequence

Transcript ID

VIT_16s0148g00260.t01
Transcript Infomation

cdna chromosome:12X:16:20226506:20230230:1 gene:VIT_16s0148g00260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCAAATGTCATGATGCTCAGAGAAACAAAAGTTGTGGCATTAACAGTCTTCCACACTTT
CTTGCTTGCAATTTGTGCTGCTAATGGAAACCAGACATGCAGGCCTTCTTCTTGTGGAGA
TATTCAAAAAATTAGCAACCCTTTCCGATTGAAAGGTGATCCGTCTGGGTGTGGTGATCC
TGACTATGAATTGGTCTGCGAAAACAATCGTACTATGGTAAACCTGGAGCATGGGAAATA
CTATGTTGCCGATATCAACTACGATAACTACACCATTCGGGTAGTGGATCCAGGGGTGGA
AAAGGGCAACTGTTTCTCCGCTCCTCTGTATTCCTTGACAAGAGAAATATTCCGTTCGGA
TAAGAGAGCATATTTTTTGAATCCGCATGAAGCGACCAATACCACGGTTTTGATGAACTG
CGAGCAGCCAATAAGTGATGGCAACTATATTCCTATCACTCCTTGCAACAGAAGCAATGT
GACTTCATCTTCCTCACAAGCATATGTTTATGCACTAGTCGGCGGAGGAGACTCCCTACT
GGTGAATGATATTAAGTATTCATGCACCATTAGCAGGACTATTATTACTCAATTCTTGAA
GCCCGGCAATCTTTCAATGTCAGATTTGCAAGAAATACTTCTTCAGGGGCTCGATATTTC
ATTCTTGCTCTTCCGTTGCAAAAGCGAATGCCATATGAAAGGGCCATACTGCGATCTAGA
TTGGACCAAAAATACTGTAAAATATCGAAGCACCTTTTCAAGCAACGGTGTGAGAGAAAG
ATACAACTACTGCTACCACTATGAAACTGCACTTTACCTTGGCATGATCATCATCGGGAG
GGCCATACCTGGTATTTTGTGTTTGCTTGTCTATTTAATCTACAAGTTTCGACGAAGACA
CTTATCATTGGATGATGGTATTGAAGAATTTCTACATAGCCATAAAAATCTTCAGCGAAT
CAAATACTCATATTCGGAGCTAAAAAAGATGACTCATAATTTTAAGAATAAATTAGGTCA
AGGAGGTTTTGACTCTGTGTACAAAGGAAAACTCCAAAGTGGTCGCATTGTAGCTGTAAA
AATGTTAGTTATGTCAAAAGCTAATGGGCAAGATTTCATCAATGAAGTTGCTACAATCGG
AAGGATTCATCATGTTAATGTTGTGAGACTTGTTGGATTTTGTATACAGAGATCAAAATG
GGCTCTTGTATATGACTTCATGCCGAATGGGTCTCTTGATAAGTTTGTTTTTCTTGACCA
AGGAAACAACATTCCCTTGATTTGGGAAAGATTATACAAGATTGCACTTGGAGTGGGACG
TGGGATTGAATACTTACATCAGGGATGTGACATGCAAATTCTCCATTTTGATATCAAGCC
ACACAACATTCTTCTTGATGAAGACTTCACACCAAAAGTTTCAAATTTTGGTCTTGCCAA
ATTATATTCAACAAATGATAGTATTGTATCCATCACTGCTGCTAGAGGAACCTTGGGCTA
CATTGCTCCTAAATTGTTCTACAAAAACATTGGAGGTGTATCATTTAAGGCTGATGTTTA
TAGTTTTGGAATGTTGTTATTGGAAATGGTAGGGAAAAGGAAGAATGTTAACACATTTGC
AGAACATTCAAGTCAAATGTATTTCACATCATGGATTTATAATAGATATGATCAAGAAGA
GGACATGAAAATGGGAGATGCCACTGAGGATGAAAAAAGGTATGTAAGGAAAATGGTGAT
AGTTGCACTATGGTGTATACAAATGAAGCCTATAGATCGTCCTTCAATGAGCCAAGCATT
GGAGATGCTTGAAGGAGAGGTTGAACTCTCGAAAATGCCTCCTAAGCCAACTCTATGGTC
TATTGATAATCATGAGCAATTCATGGTAGAGGCATCAACTTCATAATCCAATTCCATGGG
TACAATTACCTTAAAGGAAAGGTAGTACTACACCATCTAGTTGCTTATTTTGTGATCCAA
TAATAATGTGTGATTGTGTCTTATGTGTAAGGTTTCTATGAGATCCGTCTATGTAATAAG
ATAAAGTTTCTTCTTCAAACAATA