Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0148g00020.t01
CDS Infomation

cds chromosome:12X:16:19870995:19874150:1 gene:VIT_16s0148g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGTTAAGGGAGGCACAACTCGTGGGAGTAGGCCTCATGACAGTAGTCATCCATGCC
TGCTTCCTTTCAGTTTGTGTTGCTATGCATCACAAGTACCAGATTTGCAGCCCCTCTTCC
TGCGGAGATATGAGGAACATTTCCTACCCTTTTCGATTACAAGACGATCCCCCCAGCTGC
GGTTACCCTGAGTACGAATTGATTTGTGAAAACGATCGTACTATGATAAACCTGGACGGT
GGGAAGTACTTGGTTACCCAGATCAACTACCATAATTATACAATTCGGGTAGTGGATCCT
GGGCGAAAGAAGGACAACTGTTTGATCTCCAGTCCTCTTAATTCCATTGGTGCATATTAC
ACTAAGGATGAATCTCCATATTATTTGCGTTATGAATGGAGTGCTGCTTATTCTCGTTCG
CCTTCTGAACCAATATTCTATACAATAGTTTTGATGAACTGTGAGCAGTCAATCAGGGAC
GACAACTACATTCATATAATTCCATGCAACACTAGAGGCTCTTCCTCTTCCTCACCAACA
TACGCTTATGCAGTTGTCGGAGACTATGTGTCGGTGGGAGATATTCCGTATTCATGCACC
ATCGGCACATCAATTATTATTCAACCGTTGAAGTCACTTCCAGAGCCCAGCAATCTTTCG
ATGTCAGATTTGCAAGATTATATGCTTCTGGGGCTTCAGTTTTCATTTTTGCCTTTCTTC
TGCAACCGCCAATGCGAAATGAAAGGGCAAAATTGCTACGAGGAACAGTTCATTGGGAAT
GCCAGCTTTACATGCTACCAGTCAGAACTTACAGAGAAAAATTGGCTTTGGAAGTTTATA
ACCAATGATTTATTCCTTCCCTTTATTAGGGGGTTACTTTCTCCCAACACCTTAAAATTC
AGAGGACTTCGAGAAGAACTTGGTAATTGCGGACTTTACTATCCCTGCAACACCTCCATG
ATTGGTAAGGCTTTCTTCACCTACATGTCTCCTCTTCTAATATTATTTATATCTCTCACT
TATATTGGAAGGACTATGCTCGGGATGTTGTGCCTATTTGCCTATTTGATTTACAAGTTC
CACCGGAGACATCTATCATTAGATGATAGTATTGAAGAATTCTTACGGAGTCACAAAAAT
CTTCAACCAATCAAGTACTCATATTCAAACATAAAGAAGATGACTCATAACTTTGCAAAT
AAATTAGGTCAAGGAGGCTTTGGCTCTGTATATAAAGGAAAACTTCGAAGTGGTCGCATT
GTGGCTGTGAAAGTGCTGGTCATGTCAAAAGCTAATGGACAAGATTTCATCAATGAGGTT
GCAACAATAGGAAGAATTCATCATGTTAATGTGGTGAAACTGGTAGGGTTTTGTGTACAA
GGATCAAAATGGGCACTTATATATGACTTCATGCCCAATGGTTCTCTTGATAAGTTTATT
TTTCTTAAAGAAGAAAATAACACTTTTTTGAGCTGGGAAAGGTTGTATAAGGTTGCACTT
GGAGTGGGACGTGGGATTGAATACTTACATCAAGGTTGTGACATGCAAATTCTACATTTT
GATATAAAGCCACACAATATTCTTCTTGATGAAGACTTTACACCAAAAGTTTCAGATTTT
GGCCTTGCAAAATTGTATTCAACAGATGAAAGCATGGTGTCTCTCACTACTGCACGAGGA
ACATTGGGATATATTGCTCCAGAATTGTTCTATAAAAATATTGGAGGTGTCTCGTACAAA
GCCGATGTTTATAGTTTTGGAATGTTGTTAATGGAGATGGTGGGGAGAAGAAAGAATGTG
AATGCAAATGCAGCGCACTCGAGTCAAATATATTTTCCGTCATGGATTTATGACAGATAT
GATCAAGGGGATAACATAGACTTGGGAGATGCCACCGAAGATGAAAAGAAGCTTGTTAGG
AAAATGGTAATAGTTGCACTATGGTGTATACAGATGAAGCCCATAGACCGTCCTTCAATG
AGCAAAGCCTTAGAGATGTTGGAAGGAGAGGTTGAGCTATTAGAAATGCCTCCGAAGCCT
ACTCTATACTCTGAGGAAATGTTAGTTGAGGATTATATGAGCAATCCAATAGAAGCACCA
ATTTCGTTGTGCAATTCCATGGGTACAATTACATTAGATGGAAGGTAG

Peptide Sequence

PEP ID

VIT_16s0148g00020.t01
PEP Infomation

pep chromosome:12X:16:19870995:19874150:1 gene:VIT_16s0148g00020 transcript:VIT_16s0148g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MMLREAQLVGVGLMTVVIHACFLSVCVAMHHKYQICSPSSCGDMRNISYPFRLQDDPPSC
GYPEYELICENDRTMINLDGGKYLVTQINYHNYTIRVVDPGRKKDNCLISSPLNSIGAYY
TKDESPYYLRYEWSAAYSRSPSEPIFYTIVLMNCEQSIRDDNYIHIIPCNTRGSSSSSPT
YAYAVVGDYVSVGDIPYSCTIGTSIIIQPLKSLPEPSNLSMSDLQDYMLLGLQFSFLPFF
CNRQCEMKGQNCYEEQFIGNASFTCYQSELTEKNWLWKFITNDLFLPFIRGLLSPNTLKF
RGLREELGNCGLYYPCNTSMIGKAFFTYMSPLLILFISLTYIGRTMLGMLCLFAYLIYKF
HRRHLSLDDSIEEFLRSHKNLQPIKYSYSNIKKMTHNFANKLGQGGFGSVYKGKLRSGRI
VAVKVLVMSKANGQDFINEVATIGRIHHVNVVKLVGFCVQGSKWALIYDFMPNGSLDKFI
FLKEENNTFLSWERLYKVALGVGRGIEYLHQGCDMQILHFDIKPHNILLDEDFTPKVSDF
GLAKLYSTDESMVSLTTARGTLGYIAPELFYKNIGGVSYKADVYSFGMLLMEMVGRRKNV
NANAAHSSQIYFPSWIYDRYDQGDNIDLGDATEDEKKLVRKMVIVALWCIQMKPIDRPSM
SKALEMLEGEVELLEMPPKPTLYSEEMLVEDYMSNPIEAPISLCNSMGTITLDGR

Transcript Sequence

Transcript ID

VIT_16s0148g00020.t01
Transcript Infomation

cdna chromosome:12X:16:19870995:19874150:1 gene:VIT_16s0148g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGTTAAGGGAGGCACAACTCGTGGGAGTAGGCCTCATGACAGTAGTCATCCATGCC
TGCTTCCTTTCAGTTTGTGTTGCTATGCATCACAAGTACCAGATTTGCAGCCCCTCTTCC
TGCGGAGATATGAGGAACATTTCCTACCCTTTTCGATTACAAGACGATCCCCCCAGCTGC
GGTTACCCTGAGTACGAATTGATTTGTGAAAACGATCGTACTATGATAAACCTGGACGGT
GGGAAGTACTTGGTTACCCAGATCAACTACCATAATTATACAATTCGGGTAGTGGATCCT
GGGCGAAAGAAGGACAACTGTTTGATCTCCAGTCCTCTTAATTCCATTGGTGCATATTAC
ACTAAGGATGAATCTCCATATTATTTGCGTTATGAATGGAGTGCTGCTTATTCTCGTTCG
CCTTCTGAACCAATATTCTATACAATAGTTTTGATGAACTGTGAGCAGTCAATCAGGGAC
GACAACTACATTCATATAATTCCATGCAACACTAGAGGCTCTTCCTCTTCCTCACCAACA
TACGCTTATGCAGTTGTCGGAGACTATGTGTCGGTGGGAGATATTCCGTATTCATGCACC
ATCGGCACATCAATTATTATTCAACCGTTGAAGTCACTTCCAGAGCCCAGCAATCTTTCG
ATGTCAGATTTGCAAGATTATATGCTTCTGGGGCTTCAGTTTTCATTTTTGCCTTTCTTC
TGCAACCGCCAATGCGAAATGAAAGGGCAAAATTGCTACGAGGAACAGTTCATTGGGAAT
GCCAGCTTTACATGCTACCAGTCAGAACTTACAGAGAAAAATTGGCTTTGGAAGTTTATA
ACCAATGATTTATTCCTTCCCTTTATTAGGGGGTTACTTTCTCCCAACACCTTAAAATTC
AGAGGACTTCGAGAAGAACTTGGTAATTGCGGACTTTACTATCCCTGCAACACCTCCATG
ATTGGTAAGGCTTTCTTCACCTACATGTCTCCTCTTCTAATATTATTTATATCTCTCACT
TATATTGGAAGGACTATGCTCGGGATGTTGTGCCTATTTGCCTATTTGATTTACAAGTTC
CACCGGAGACATCTATCATTAGATGATAGTATTGAAGAATTCTTACGGAGTCACAAAAAT
CTTCAACCAATCAAGTACTCATATTCAAACATAAAGAAGATGACTCATAACTTTGCAAAT
AAATTAGGTCAAGGAGGCTTTGGCTCTGTATATAAAGGAAAACTTCGAAGTGGTCGCATT
GTGGCTGTGAAAGTGCTGGTCATGTCAAAAGCTAATGGACAAGATTTCATCAATGAGGTT
GCAACAATAGGAAGAATTCATCATGTTAATGTGGTGAAACTGGTAGGGTTTTGTGTACAA
GGATCAAAATGGGCACTTATATATGACTTCATGCCCAATGGTTCTCTTGATAAGTTTATT
TTTCTTAAAGAAGAAAATAACACTTTTTTGAGCTGGGAAAGGTTGTATAAGGTTGCACTT
GGAGTGGGACGTGGGATTGAATACTTACATCAAGGTTGTGACATGCAAATTCTACATTTT
GATATAAAGCCACACAATATTCTTCTTGATGAAGACTTTACACCAAAAGTTTCAGATTTT
GGCCTTGCAAAATTGTATTCAACAGATGAAAGCATGGTGTCTCTCACTACTGCACGAGGA
ACATTGGGATATATTGCTCCAGAATTGTTCTATAAAAATATTGGAGGTGTCTCGTACAAA
GCCGATGTTTATAGTTTTGGAATGTTGTTAATGGAGATGGTGGGGAGAAGAAAGAATGTG
AATGCAAATGCAGCGCACTCGAGTCAAATATATTTTCCGTCATGGATTTATGACAGATAT
GATCAAGGGGATAACATAGACTTGGGAGATGCCACCGAAGATGAAAAGAAGCTTGTTAGG
AAAATGGTAATAGTTGCACTATGGTGTATACAGATGAAGCCCATAGACCGTCCTTCAATG
AGCAAAGCCTTAGAGATGTTGGAAGGAGAGGTTGAGCTATTAGAAATGCCTCCGAAGCCT
ACTCTATACTCTGAGGAAATGTTAGTTGAGGATTATATGAGCAATCCAATAGAAGCACCA
ATTTCGTTGTGCAATTCCATGGGTACAATTACATTAGATGGAAGGTAG