Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0100g00730.t01
CDS Infomation

cds chromosome:12X:16:16208792:16210364:-1 gene:VIT_16s0100g00730 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAACTTCTTACAAAAATCTGATCTTATACACATCACTCTGTCTAACACTCACCCTC
ATTCTCAAATTGCTCAAAATCCCAATCTTTTTTCTTCATGGGCTCTTCACTTATATTCAC
CCGGATGCTGTTGACAACTCCAAGGGTATCAAAGCAGCTATTCGAAGACCCGATTCGGAT
TCTTCAAGTTTTGAGCTCAAAAAGAGGGGCAAATCCAAAGAGAAGTACGAATTCGATGAA
AACAATGCTCAGATCTTCAGGTTGAAGCTGGACGAGGGTCATCTCGAAACGCGAATCTAT
TTCAAAGAGTATTGTGATGCTTTTAGGCTCTCTCTTGTTGGGGTTTTGTGTTTATTGCTT
AAGATTTTTTTAAGTGTTTCGAAGGATTCTGGGGTTTTGGGAAATGAGGTTTTGGTTCCG
GTGCTTTTGGGGGTTGTGGGTGTGGGTAAAGTGTTTGTGATTCTCGCAAAGGTATCGTTC
GAGAAATCGGCGTCGAAGAGGTCTGAGAAGCAATTGAGTGTTGGTATGGGGTTTTTGGGG
TTTTTGTTAGGGTTTATTATTTGTTGTGAATTGGCTCCCTCAGTTTTTGATGTTAAATTT
GGATCAATTGATGGGTTTGGGAGGATTTCTGTTGCTCTTTTGATGGGCTGCTTTTCGGGT
TTCTTGTTTATGCCTGCAACCAAGTGTGCTCGGGCATTTTGGATTGGAACTGATCAGCTT
CGATGGAATTTGTCAATAATTTCATGTGGCTGGATTGCTAGAGTGATCCTTTATGTTAAT
TATCTGTTAATTGTGTTCACAGCATTGCTCTGGATTAAACCAATGACAGCAGTCCTTGTC
AATGTAAACAATAGTGATACTAAAGAAGCAATCGGGAATGCTGACAAATTGGTTGAGAAT
TTGGGTATATCCCAATCAGATTTTGAGAAGCTTAGAGTTTGGTGTTTGTTGCTTTCGGGG
ATTTTGCAAGTTGTGGCTTTGCGCCCGAACTTGCAAATGTATTTGAATGAAGCAGTGTTG
TCGTGGTACCAGCGATTGCACTCTAGCAAGGTTCCGGACTTGGATTTTAGCAGGGCAAAG
GTGTTTCTGCACAATCACTACTTTTGCCTTGTAGTTTTGCAGTTTTTTGCACCGCCAGCA
CTGGTACTTCTCTTTCTTGGCTTGTCTCAGGTTGAGAGTAACTTATTTGAAAATTTCCAG
TTCATAAGTAGTTTACTGCCTTGCTCTGCTTCTTTTAAAGAGGTTGCTTTGTTATTGGCT
TGGTGGGTTGTCTTTGTTTGGGCGATTTTTACTTCAGCAAGCCTTTTGTTGTATCGGCGT
GGCATTTTGTATGTTTCATGA

Peptide Sequence

PEP ID

VIT_16s0100g00730.t01
PEP Infomation

pep chromosome:12X:16:16208792:16210364:-1 gene:VIT_16s0100g00730 transcript:VIT_16s0100g00730.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATSYKNLILYTSLCLTLTLILKLLKIPIFFLHGLFTYIHPDAVDNSKGIKAAIRRPDSD
SSSFELKKRGKSKEKYEFDENNAQIFRLKLDEGHLETRIYFKEYCDAFRLSLVGVLCLLL
KIFLSVSKDSGVLGNEVLVPVLLGVVGVGKVFVILAKVSFEKSASKRSEKQLSVGMGFLG
FLLGFIICCELAPSVFDVKFGSIDGFGRISVALLMGCFSGFLFMPATKCARAFWIGTDQL
RWNLSIISCGWIARVILYVNYLLIVFTALLWIKPMTAVLVNVNNSDTKEAIGNADKLVEN
LGISQSDFEKLRVWCLLLSGILQVVALRPNLQMYLNEAVLSWYQRLHSSKVPDLDFSRAK
VFLHNHYFCLVVLQFFAPPALVLLFLGLSQVESNLFENFQFISSLLPCSASFKEVALLLA
WWVVFVWAIFTSASLLLYRRGILYVS

Transcript Sequence

Transcript ID

VIT_16s0100g00730.t01
Transcript Infomation

cdna chromosome:12X:16:16208792:16210364:-1 gene:VIT_16s0100g00730 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTTCTCTCTGTCCGTATCAGCCGCCTCCATGGCGCATCCCAAGCCTTAGAGATCTGTTT
TCCTCTTGTCTTCAAACCCTCAAAAAAAGATGGCAACTTCTTACAAAAATCTGATCTTAT
ACACATCACTCTGTCTAACACTCACCCTCATTCTCAAATTGCTCAAAATCCCAATCTTTT
TTCTTCATGGGCTCTTCACTTATATTCACCCGGATGCTGTTGACAACTCCAAGGGTATCA
AAGCAGCTATTCGAAGACCCGATTCGGATTCTTCAAGTTTTGAGCTCAAAAAGAGGGGCA
AATCCAAAGAGAAGTACGAATTCGATGAAAACAATGCTCAGATCTTCAGGTTGAAGCTGG
ACGAGGGTCATCTCGAAACGCGAATCTATTTCAAAGAGTATTGTGATGCTTTTAGGCTCT
CTCTTGTTGGGGTTTTGTGTTTATTGCTTAAGATTTTTTTAAGTGTTTCGAAGGATTCTG
GGGTTTTGGGAAATGAGGTTTTGGTTCCGGTGCTTTTGGGGGTTGTGGGTGTGGGTAAAG
TGTTTGTGATTCTCGCAAAGGTATCGTTCGAGAAATCGGCGTCGAAGAGGTCTGAGAAGC
AATTGAGTGTTGGTATGGGGTTTTTGGGGTTTTTGTTAGGGTTTATTATTTGTTGTGAAT
TGGCTCCCTCAGTTTTTGATGTTAAATTTGGATCAATTGATGGGTTTGGGAGGATTTCTG
TTGCTCTTTTGATGGGCTGCTTTTCGGGTTTCTTGTTTATGCCTGCAACCAAGTGTGCTC
GGGCATTTTGGATTGGAACTGATCAGCTTCGATGGAATTTGTCAATAATTTCATGTGGCT
GGATTGCTAGAGTGATCCTTTATGTTAATTATCTGTTAATTGTGTTCACAGCATTGCTCT
GGATTAAACCAATGACAGCAGTCCTTGTCAATGTAAACAATAGTGATACTAAAGAAGCAA
TCGGGAATGCTGACAAATTGGTTGAGAATTTGGGTATATCCCAATCAGATTTTGAGAAGC
TTAGAGTTTGGTGTTTGTTGCTTTCGGGGATTTTGCAAGTTGTGGCTTTGCGCCCGAACT
TGCAAATGTATTTGAATGAAGCAGTGTTGTCGTGGTACCAGCGATTGCACTCTAGCAAGG
TTCCGGACTTGGATTTTAGCAGGGCAAAGGTGTTTCTGCACAATCACTACTTTTGCCTTG
TAGTTTTGCAGTTTTTTGCACCGCCAGCACTGGTACTTCTCTTTCTTGGCTTGTCTCAGG
TTGAGAGTAACTTATTTGAAAATTTCCAGTTCATAAGTAGTTTACTGCCTTGCTCTGCTT
CTTTTAAAGAGGTTGCTTTGTTATTGGCTTGGTGGGTTGTCTTTGTTTGGGCGATTTTTA
CTTCAGCAAGCCTTTTGTTGTATCGGCGTGGCATTTTGTATGTTTCATGATGACACTGTA
TTTTTTTGTCTTGGCCTAAAATAGTCAGCCATTGAGTTGGGTTTTATTTGTTCCTTTGAT
AAGTTTTGTGCTTGTATTGATCTTGTATCCGTTTATCTGTTTGATGACTTGCAACTTACA
ACAATGAAGAACT