Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0100g00560.t01
CDS Infomation

cds chromosome:12X:16:16044551:16046231:1 gene:VIT_16s0100g00560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTCAGACACAGTCACAGCAGATATCAGCCTCTCCTCTTTCGTATACGCTCTTCTT
CTGCTACCATTTTTGCTCATTCTCAAGCATATTTTCTTGAAACCTCCACCACTTCCACCG
GGTCCATATCCATGGCCTATCATCGGAAACCTCCTCCAACTGGGGAAGAACCCTCATGTC
AAACTCGCCAGCCTCGCCAAACTCCATGGCCCACTCATGTCTCTACGCCTCGGTACACAG
CTGATGGTGGTGGCATCCTCGCCTGCAGCAGCACTTGAAGTACTCAAGACCCATGACCGG
ACACTCTCTGGCCGGTACGTAAGTAGTTCACTATCAGTCAAGGACCCTAAACTTAACCAT
TTGTCACTAGCGTTTGCCAAGGAGTGCACCAACAACTGGAAGAATCTAAGAACCATTTGC
CGGACGGAGATGTTTTCAGGCAAAGCAATGGAGTCTCATGTGGAGTTGAGGGAGAGGAAG
GTGATGGAGTTGGTGGAGTTTTTGGCAACAAAGGAAGGTGAAGTGGTCAAGGTTATGGAT
CTAGTGTTTACTACTATTTGTAATATACTGAGCAATACGTTTTTTTCAATGGACCTTTGT
GATTTTGAGCGTGAGGGTTTGAAGGATTTCATCTATAGAGCTGCAGAGTTGGGGGCTACT
CCAAATCTATCAGACTTTTATCCTATATTGGACGGATTGAATCTGCACGGTTCTAAGAAG
AAATCCAAGGAGGCGCTGGGGAGGATTCTCGCTACTTGGGAGGGGACTCTCAAAGAAAGA
AGGAAGCAAAAGAATCCTGGTTCCAGCCATCGAGACCTCTTGGAGGCTTTTTTAGAAATT
AGGTTTGAAGATGATCAGATCAACCAAGTGATTCTGGAGCTCTTCAGTGCCGGGGCAGAC
ACTAGCACATTGACAATAGAATGGGCAATTACACAGCTGATTAGAAACCCAGATGTCATG
TATAAACTTCGAGATGAACTCACAAAAATAATCGGTGAATCTCCAGTAAGAGAGTCCCAT
TTGCCTCATCTGCCCTATCTCCAAGCCTGTGTGAAAGAGACCCTGAGATTGCATCCTCCA
GCACCACTACTCCTTCCTCACCGAGCCATGGAGACATGCCAAGTCATGGGCTACACAATT
CCAAAAGACTCCCAAGTATTTGTGAACATTTGGGCTATGGGGAGAGACCCCAAGGTTTGG
GATGACCCATTGAGCTTCACACCAGAAAGGTTTCTGGATTCAAAGTTGGAATTCAAGGGA
AATGATTTCGAATATATACCATTTGGGGCAGGGAGGAGAATCTGTCCAGGAATGGCTTTG
GGTGCTAGGCAAGTTCCCTTGGTTCTTGCAACGTTGGTCCACTTGTTTGATTGGTCTCTT
CCGGACAATATGGACTCCGCCCAAATAGACATGGAGGAGTGGTTGGTTATTACATTGAGG
AAGGAAAATCCACTGCGCCTTGTTCCTAAGGTTAGAAAATAA

Peptide Sequence

PEP ID

VIT_16s0100g00560.t01
PEP Infomation

pep chromosome:12X:16:16044551:16046231:1 gene:VIT_16s0100g00560 transcript:VIT_16s0100g00560.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDSDTVTADISLSSFVYALLLLPFLLILKHIFLKPPPLPPGPYPWPIIGNLLQLGKNPHV
KLASLAKLHGPLMSLRLGTQLMVVASSPAAALEVLKTHDRTLSGRYVSSSLSVKDPKLNH
LSLAFAKECTNNWKNLRTICRTEMFSGKAMESHVELRERKVMELVEFLATKEGEVVKVMD
LVFTTICNILSNTFFSMDLCDFEREGLKDFIYRAAELGATPNLSDFYPILDGLNLHGSKK
KSKEALGRILATWEGTLKERRKQKNPGSSHRDLLEAFLEIRFEDDQINQVILELFSAGAD
TSTLTIEWAITQLIRNPDVMYKLRDELTKIIGESPVRESHLPHLPYLQACVKETLRLHPP
APLLLPHRAMETCQVMGYTIPKDSQVFVNIWAMGRDPKVWDDPLSFTPERFLDSKLEFKG
NDFEYIPFGAGRRICPGMALGARQVPLVLATLVHLFDWSLPDNMDSAQIDMEEWLVITLR
KENPLRLVPKVRK

Transcript Sequence

Transcript ID

VIT_16s0100g00560.t01
Transcript Infomation

cdna chromosome:12X:16:16044551:16046231:1 gene:VIT_16s0100g00560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAATCTATTTCAACAATTTCATCGATTCAAACTTTCCCTTTTTCTCTCTTGCCAAACGCA
CTTACAGATTCACTGACAGTATTGCAGCTTCATTTTCATCAACACTATGGATTCAGACAC
AGTCACAGCAGATATCAGCCTCTCCTCTTTCGTATACGCTCTTCTTCTGCTACCATTTTT
GCTCATTCTCAAGCATATTTTCTTGAAACCTCCACCACTTCCACCGGGTCCATATCCATG
GCCTATCATCGGAAACCTCCTCCAACTGGGGAAGAACCCTCATGTCAAACTCGCCAGCCT
CGCCAAACTCCATGGCCCACTCATGTCTCTACGCCTCGGTACACAGCTGATGGTGGTGGC
ATCCTCGCCTGCAGCAGCACTTGAAGTACTCAAGACCCATGACCGGACACTCTCTGGCCG
GTACGTAAGTAGTTCACTATCAGTCAAGGACCCTAAACTTAACCATTTGTCACTAGCGTT
TGCCAAGGAGTGCACCAACAACTGGAAGAATCTAAGAACCATTTGCCGGACGGAGATGTT
TTCAGGCAAAGCAATGGAGTCTCATGTGGAGTTGAGGGAGAGGAAGGTGATGGAGTTGGT
GGAGTTTTTGGCAACAAAGGAAGGTGAAGTGGTCAAGGTTATGGATCTAGTGTTTACTAC
TATTTGTAATATACTGAGCAATACGTTTTTTTCAATGGACCTTTGTGATTTTGAGCGTGA
GGGTTTGAAGGATTTCATCTATAGAGCTGCAGAGTTGGGGGCTACTCCAAATCTATCAGA
CTTTTATCCTATATTGGACGGATTGAATCTGCACGGTTCTAAGAAGAAATCCAAGGAGGC
GCTGGGGAGGATTCTCGCTACTTGGGAGGGGACTCTCAAAGAAAGAAGGAAGCAAAAGAA
TCCTGGTTCCAGCCATCGAGACCTCTTGGAGGCTTTTTTAGAAATTAGGTTTGAAGATGA
TCAGATCAACCAAGTGATTCTGGAGCTCTTCAGTGCCGGGGCAGACACTAGCACATTGAC
AATAGAATGGGCAATTACACAGCTGATTAGAAACCCAGATGTCATGTATAAACTTCGAGA
TGAACTCACAAAAATAATCGGTGAATCTCCAGTAAGAGAGTCCCATTTGCCTCATCTGCC
CTATCTCCAAGCCTGTGTGAAAGAGACCCTGAGATTGCATCCTCCAGCACCACTACTCCT
TCCTCACCGAGCCATGGAGACATGCCAAGTCATGGGCTACACAATTCCAAAAGACTCCCA
AGTATTTGTGAACATTTGGGCTATGGGGAGAGACCCCAAGGTTTGGGATGACCCATTGAG
CTTCACACCAGAAAGGTTTCTGGATTCAAAGTTGGAATTCAAGGGAAATGATTTCGAATA
TATACCATTTGGGGCAGGGAGGAGAATCTGTCCAGGAATGGCTTTGGGTGCTAGGCAAGT
TCCCTTGGTTCTTGCAACGTTGGTCCACTTGTTTGATTGGTCTCTTCCGGACAATATGGA
CTCCGCCCAAATAGACATGGAGGAGTGGTTGGTTATTACATTGAGGAAGGAAAATCCACT
GCGCCTTGTTCCTAAGGTTAGAAAATAA