Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0100g00510.t01
CDS Infomation

cds chromosome:12X:16:15992820:15996343:-1 gene:VIT_16s0100g00510 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGGATGGCAATGATTTCATACGTTGGCTTGGACGTGACATGTCAATCAAAATCCTG
ATGTGTTTGGAGGACCCATCTGATCTTGTTCGGGTTAGCACGGTTTCAAGGTTGTGGCGT
CAATTTGTGATTGAAAATGGCCTTTCTAAGCAGCTTTGTTTAAGAATGTTACCTGAAATG
TCCAGTTTGGCTGGTGCTATTGAAATAAACAACATGATAGAAACTGAAGAAGTCCAGTCT
AACAATATGGAGCGGAAGATTTTGGAGAAGAATCATAGAGTTTATGCCTATTTGGCTCAA
GGACTTACCTCTTCCATGAGAACTGCTTGCATAGCACGGGCCATTAGCGCATCCAGCACT
GATAACTACCCTGAAGAAACCATTGATAATACTTTGGATCCAAGGGATAGGATTAGACAC
AGCGCTTCATACTGGTCAAGTGAAGGAGAAATGGATCCTTCGATTCCCGAGAGTTTGGTT
TATAAGTTGATTGCCAATTTGTGTGTTGTTACTGAGATCCATGTGCAACCATTTCAAGCA
TATTTTCAGTTTGGTCACCCTATATATTCAGCTAAGGCTGTGCGGTTTCGAATGGGCCAT
CAGATGTATCCAATGGAGAGAGGTGGTGATGCAGCAAATGATCCTGCTGCTGGTTTTGAT
TCTCTTGAGGATCAGTACATATGGACATATACTTCACCAGAGTTCCCAATGGCTCAGGAA
AACCGCTTGCAAAAGTTCAAGCTACCAGAACCTGCTCTTTGCATTGGAGGAATTCTGCAA
ATCGAGCTGTTGGGTAGAGTTCAGAAACAAGAGATGGATGGTTTATACTATATATGTGTC
TCCCATGTTCAAGTTGTTGGTCGACCACTCTCAGAGGCATTTGATGTTGAAATACATGAT
CCCTCAGGGAAGTTCACCTTGAAATACTTTCATAGAGGATACCAGTGCCAGTCTCCTGTA
GTAGCACCAGAAGGGTTGGGTGCCGACACGGCGTCATGGATGCAGAGTGATGCTAGGAGT
ATTGAGCAAATAATTGAAAGGTTTCTTGGTGCTGCAGCTGAAGACGATTCAGACGACGAC
TACTTGCCTACTTTTTAG

Peptide Sequence

PEP ID

VIT_16s0100g00510.t01
PEP Infomation

pep chromosome:12X:16:15992820:15996343:-1 gene:VIT_16s0100g00510 transcript:VIT_16s0100g00510.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGDGNDFIRWLGRDMSIKILMCLEDPSDLVRVSTVSRLWRQFVIENGLSKQLCLRMLPEM
SSLAGAIEINNMIETEEVQSNNMERKILEKNHRVYAYLAQGLTSSMRTACIARAISASST
DNYPEETIDNTLDPRDRIRHSASYWSSEGEMDPSIPESLVYKLIANLCVVTEIHVQPFQA
YFQFGHPIYSAKAVRFRMGHQMYPMERGGDAANDPAAGFDSLEDQYIWTYTSPEFPMAQE
NRLQKFKLPEPALCIGGILQIELLGRVQKQEMDGLYYICVSHVQVVGRPLSEAFDVEIHD
PSGKFTLKYFHRGYQCQSPVVAPEGLGADTASWMQSDARSIEQIIERFLGAAAEDDSDDD
YLPTF

Transcript Sequence

Transcript ID

VIT_16s0100g00510.t01
Transcript Infomation

cdna chromosome:12X:16:15992820:15996343:-1 gene:VIT_16s0100g00510 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTTTTCTCTCACCTAGATATGCCTGTAATGGGGGATGGCAATGATTTCATACGTTGGCTT
GGACGTGACATGTCAATCAAAATCCTGATGTGTTTGGAGGACCCATCTGATCTTGTTCGG
GTTAGCACGGTTTCAAGGTTGTGGCGTCAATTTGTGATTGAAAATGGCCTTTCTAAGCAG
CTTTGTTTAAGAATGTTACCTGAAATGTCCAGTTTGGCTGGTGCTATTGAAATAAACAAC
ATGATAGAAACTGAAGAAGTCCAGTCTAACAATATGGAGCGGAAGATTTTGGAGAAGAAT
CATAGAGTTTATGCCTATTTGGCTCAAGGACTTACCTCTTCCATGAGAACTGCTTGCATA
GCACGGGCCATTAGCGCATCCAGCACTGATAACTACCCTGAAGAAACCATTGATAATACT
TTGGATCCAAGGGATAGGATTAGACACAGCGCTTCATACTGGTCAAGTGAAGGAGAAATG
GATCCTTCGATTCCCGAGAGTTTGGTTTATAAGTTGATTGCCAATTTGTGTGTTGTTACT
GAGATCCATGTGCAACCATTTCAAGCATATTTTCAGTTTGGTCACCCTATATATTCAGCT
AAGGCTGTGCGGTTTCGAATGGGCCATCAGATGTATCCAATGGAGAGAGGTGGTGATGCA
GCAAATGATCCTGCTGCTGGTTTTGATTCTCTTGAGGATCAGTACATATGGACATATACT
TCACCAGAGTTCCCAATGGCTCAGGAAAACCGCTTGCAAAAGTTCAAGCTACCAGAACCT
GCTCTTTGCATTGGAGGAATTCTGCAAATCGAGCTGTTGGGTAGAGTTCAGAAACAAGAG
ATGGATGGTTTATACTATATATGTGTCTCCCATGTTCAAGTTGTTGGTCGACCACTCTCA
GAGGCATTTGATGTTGAAATACATGATCCCTCAGGGAAGTTCACCTTGAAATACTTTCAT
AGAGGATACCAGTGCCAGTCTCCTGTAGTAGCACCAGAAGGGTTGGGTGCCGACACGGCG
TCATGGATGCAGAGTGATGCTAGGAGTATTGAGCAAATAATTGAAAGGTTTCTTGGTGCT
GCAGCTGAAGACGATTCAGACGACGACTACTTGCCTACTTTTTAGTCTGTACAGTGTTGA
TGGACTTTAATAGTCCTTTGTCATTTCGCTACTTTTTGGATATAGACCAAAGTGGTGCTA
GGAGTATTGAGCAAATGATAATGGAAAGGTTTCTTGGTGCTGCAGCTGAAGACGATTCAG
ATGACTACTTGCCTACTCTTTAGTCTGTGCAATGTTGATCCACTTTAATATTCCTTTGTC
ATTTCCCTGCTTTTTGGATAGACCAAGTCTCATCTGGAACTGAGACTGTTCATCTGTAAT
CAATTTGTTTACCGTAAATCAGTGTTTTAAAA