Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0100g00380.t01
CDS Infomation

cds chromosome:12X:16:15813825:15814917:-1 gene:VIT_16s0100g00380 gene_biotype:protein_coding transcript_biotype:protein_coding description:C-repeat binding factor 4 [Source:UniProtKB/TrEMBL;Acc:A0SJQ7]
Sequence

ATGAATACTACTTCTCCACCATATTCCGACCCTCACCCGCTCGTATGCAATTGGGATTCC
CTGAATTTGCCTGATTCTGATGGAGGCAGCGAAGAGTTGATGCTGGCCTCCACACACCCG
AAGAAGCGGGCTGGGAGGAAGAAGTTTCGGGAGACGCGGCACCCTGTGTACCGCGGCGTG
CGGCGGAGGAACTCCGGGAAGTGGGTATGCGAGGTGAGGGAGCCCAACAAGACGTCCAGG
ATATGGCTGGGGACGTTTCCGACGGCGGAGATGGCTGCGCGCGCGCACGACGTGGCGGCA
TTGGCGCTGAGGGGACGTGGGGCTTGCCTCAATTTTGCGGACTCTGCGTGGCGGCTGCAT
GTGCCTAGCTCCCGCGACGCCAAGGACATTCAGAAGGCGGCAGCGGAGGCGGCGGAGGCG
TTTAGGCCAATGGAGAATGATGGGGTTATGCAAGATGAGAGGAGGGAAGAGAGTGAGGTG
AGGACGCCGGATAATGTGTTTGTTATGGATGAGGAGGACGTTTTTGGAATGCCGGGTCTG
CTGGTGAATATGGCTGAGGGTCTGCTGATGCCTCCGCCGCATAGCGTGGCGGATGGCTAC
GGTGGAGATGACATGGCGGCGGATGCTGACATGTCGTTATGGAGTTACTCTATTTAG

Peptide Sequence

PEP ID

VIT_16s0100g00380.t01
PEP Infomation

pep chromosome:12X:16:15813825:15814917:-1 gene:VIT_16s0100g00380 transcript:VIT_16s0100g00380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:C-repeat binding factor 4 [Source:UniProtKB/TrEMBL;Acc:A0SJQ7]
Sequence

MNTTSPPYSDPHPLVCNWDSLNLPDSDGGSEELMLASTHPKKRAGRKKFRETRHPVYRGV
RRRNSGKWVCEVREPNKTSRIWLGTFPTAEMAARAHDVAALALRGRGACLNFADSAWRLH
VPSSRDAKDIQKAAAEAAEAFRPMENDGVMQDERREESEVRTPDNVFVMDEEDVFGMPGL
LVNMAEGLLMPPPHSVADGYGGDDMAADADMSLWSYSI

Transcript Sequence

Transcript ID

VIT_16s0100g00380.t01
Transcript Infomation

cdna chromosome:12X:16:15813825:15814917:-1 gene:VIT_16s0100g00380 gene_biotype:protein_coding transcript_biotype:protein_coding description:C-repeat binding factor 4 [Source:UniProtKB/TrEMBL;Acc:A0SJQ7]
Sequence

ACAAAAAGGGCTTCACTCAGCACTCAAATCAGTTACCGTTCTCCTTAACTGCTCTTACTA
AATCTCGACACTTCAGTCTTCACCGTTATGAATACTACTTCTCCACCATATTCCGACCCT
CACCCGCTCGTATGCAATTGGGATTCCCTGAATTTGCCTGATTCTGATGGAGGCAGCGAA
GAGTTGATGCTGGCCTCCACACACCCGAAGAAGCGGGCTGGGAGGAAGAAGTTTCGGGAG
ACGCGGCACCCTGTGTACCGCGGCGTGCGGCGGAGGAACTCCGGGAAGTGGGTATGCGAG
GTGAGGGAGCCCAACAAGACGTCCAGGATATGGCTGGGGACGTTTCCGACGGCGGAGATG
GCTGCGCGCGCGCACGACGTGGCGGCATTGGCGCTGAGGGGACGTGGGGCTTGCCTCAAT
TTTGCGGACTCTGCGTGGCGGCTGCATGTGCCTAGCTCCCGCGACGCCAAGGACATTCAG
AAGGCGGCAGCGGAGGCGGCGGAGGCGTTTAGGCCAATGGAGAATGATGGGGTTATGCAA
GATGAGAGGAGGGAAGAGAGTGAGGTGAGGACGCCGGATAATGTGTTTGTTATGGATGAG
GAGGACGTTTTTGGAATGCCGGGTCTGCTGGTGAATATGGCTGAGGGTCTGCTGATGCCT
CCGCCGCATAGCGTGGCGGATGGCTACGGTGGAGATGACATGGCGGCGGATGCTGACATG
TCGTTATGGAGTTACTCTATTTAGTAATTAGTCTAAAGAAACAGAGGGTAGGTGGGAGTT
TAGTAGAATTAACTATTAGCCCGTACTTCATTTTTTGGCCAGTACGGAGATATTAATATG
TAAGAAAAAGTAAGAGAAAATCCCAAAAGTGGGAGGTAAATCCGGTGGTTGGTACGTGGC
GGTTGGCATGAAGGGATCAAATGGACCATTCCCTAATAATATCGCCAGCGAGTGTGTGGA
AAGCTACGGAAAGAGCTTGTTTCAGCTTTTAATGCCTTGTGGTTTGGATGCAGATAAAGA
GAGTGGTTTTGATAAAATGCTTTGCTATGTAATTAAATAAGCAAAGTCATAATGTAATCT
AAATGGTATTGAA