Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0098g01860.t01
CDS Infomation

cds chromosome:12X:16:21939740:21947150:-1 gene:VIT_16s0098g01860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGCTGCACTGAGGTCGAAATCGTCTAGAGAAACGGCCTTGTTAACATTCTCTCAG
TTCAGATACTTCATCTTGAATCATATGCATGCGGGTCGTTTGCCCAATTCCTATATTTCC
CACAAACCCAATTGCGACCATTGCTTTACGCATTCCCACACACCCTACCACTTCACCTCA
TTCAAACCCGTGTCTCTGCGTGGTGAACTTGTCGATAAGGGTCTTGAGTTCTTCGATAAT
CAGAGGTTTTCGAAGGTGGGTTTTAGTACGAATGAGAGTAAAAAATTGAGCAGGGATACT
ATTTTGAATTCTTTTGGGGACCCGCCGGAGGTTTGGTCCGGCGACGGAATTGTGGTCCGG
CAGGGGGGATCAGGTTCGAATTTGGTCCGTGGGGGCGGTGGGGCAGGAGCGAACGGGGGA
GCAGGTAGTGGGTTCGGTTCCAATTCAAAGGACGAGTCTTGGGGAGGATCAAATTTGGGC
CACAATTTCCCAACCCCGAAAGAGATCTGTAGAGGATTGGATAAGTTTGTGATTGGGCAG
GAGAGAGCGAAAAAGGTGCTCTCTGTGGCAGTATATAATCATTATAAGCGGATCTATCAT
CAGTCCCTCCAAAAGTGGCCTGCAGAAGATACAAGTGATGACAAAGCAGAGGCCACGGAT
AATGATTCAGTGGAACTCGAGAAAAGTAACATTCTTCTAATGGGACCGACTGGCTCAGGG
AAGACATTACTTGCCAAAACCTTGGCACGGTTTGTGAATGTTCCCTTTGTTATTGCAGAT
GCCACTACACTCACTCAGGCAAGATATGTTGGGGAAGATGTGGAATCTATATTATACAAG
CTCCTCATGGTTGCTGACTATAATGTAGCAGCTGCCCAGCAGGGCATCGTTTACATTGAT
GAAGTTGACAAAATCACAAAGAAGGCTGAGAGCCTCAATCTTAGCAGAGATGTATCAGGG
GAGGGTGTCCAACAGGCTTTACTAAAAATGCTGGAAGGAACAGTTGTGAACGTCCCAGAA
AAGGGAGCTCGAAAGCACCCCAGAGGTGACAACATTCAGATTGACACAAAGGACATTCTC
TTCATATGTGGGGGTGCCTTCATTGATCTAGAGAAAACAATCTCTGAAAGACGCCAAGAT
TCTTCTATTGGGTTTGGTGCACCAGTACGTGCAAACATGAGAACTGGTGGTCCGACAGAT
GCTGCTGTGGCATCATCATTATTGGAGACTGTTGAAAGCAGTGATCTTATTTCATACGGT
TTAATACCTGAATTTGTTGGGCGATTTCCAATCCTTGTTAGTTTGTCTGCTCTCACTGAG
AACCAACTTGTTGAGGTCCTAACAGAACCGAAAAATGCTCTGGGGAAGCAGTACAAGAAG
ATGTTCCAAATGAATGGAGTCAAGCTGCATTTCACAAAAAATGCTCTGAGATTAATTTCT
AGAAAGGCAATGTCCAAAAACACGGGTGCTCGAGGCTTAAGGTCCATATTAGAGAATATT
TTGATGAATGCGATGTATGAGATCCCAGATGTGAGAACAGGAAATGATATCATTGATGCT
GTAGTTGTTGATGATGAGGCTGTTGGCTCTGATGGACACGGATTTGGAGCCAAAATACTT
TACGGAAAGGGTGCACTGGACTGCTATCTTTCACAACACAAATTAAAGGAGACAGAAACA
CCCATGGAGGGCTCTTCTGATGGTGAAGCCGAGGCAGAGGCAGAAATTCCTTCCATTGTC
GCCAGCATGTAA

Peptide Sequence

PEP ID

VIT_16s0098g01860.t01
PEP Infomation

pep chromosome:12X:16:21939740:21947150:-1 gene:VIT_16s0098g01860 transcript:VIT_16s0098g01860.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAALRSKSSRETALLTFSQFRYFILNHMHAGRLPNSYISHKPNCDHCFTHSHTPYHFTS
FKPVSLRGELVDKGLEFFDNQRFSKVGFSTNESKKLSRDTILNSFGDPPEVWSGDGIVVR
QGGSGSNLVRGGGGAGANGGAGSGFGSNSKDESWGGSNLGHNFPTPKEICRGLDKFVIGQ
ERAKKVLSVAVYNHYKRIYHQSLQKWPAEDTSDDKAEATDNDSVELEKSNILLMGPTGSG
KTLLAKTLARFVNVPFVIADATTLTQARYVGEDVESILYKLLMVADYNVAAAQQGIVYID
EVDKITKKAESLNLSRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDIL
FICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGPTDAAVASSLLETVESSDLISYG
LIPEFVGRFPILVSLSALTENQLVEVLTEPKNALGKQYKKMFQMNGVKLHFTKNALRLIS
RKAMSKNTGARGLRSILENILMNAMYEIPDVRTGNDIIDAVVVDDEAVGSDGHGFGAKIL
YGKGALDCYLSQHKLKETETPMEGSSDGEAEAEAEIPSIVASM

Transcript Sequence

Transcript ID

VIT_16s0098g01860.t01
Transcript Infomation

cdna chromosome:12X:16:21939740:21947150:-1 gene:VIT_16s0098g01860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACGTCTCACTTTTCTCCTTAATCCCCTCCATGACCCCCAAAAGCGCCAAAATCCCATTT
TTCTGACATAGTTTCCCTTAACTTTCCGGGAAAATTTACAGGTCCCATGGCCGCTGCACT
GAGGTCGAAATCGTCTAGAGAAACGGCCTTGTTAACATTCTCTCAGTTCAGATACTTCAT
CTTGAATCATATGCATGCGGGTCGTTTGCCCAATTCCTATATTTCCCACAAACCCAATTG
CGACCATTGCTTTACGCATTCCCACACACCCTACCACTTCACCTCATTCAAACCCGTGTC
TCTGCGTGGTGAACTTGTCGATAAGGGTCTTGAGTTCTTCGATAATCAGAGGTTTTCGAA
GGTGGGTTTTAGTACGAATGAGAGTAAAAAATTGAGCAGGGATACTATTTTGAATTCTTT
TGGGGACCCGCCGGAGGTTTGGTCCGGCGACGGAATTGTGGTCCGGCAGGGGGGATCAGG
TTCGAATTTGGTCCGTGGGGGCGGTGGGGCAGGAGCGAACGGGGGAGCAGGTAGTGGGTT
CGGTTCCAATTCAAAGGACGAGTCTTGGGGAGGATCAAATTTGGGCCACAATTTCCCAAC
CCCGAAAGAGATCTGTAGAGGATTGGATAAGTTTGTGATTGGGCAGGAGAGAGCGAAAAA
GGTGCTCTCTGTGGCAGTATATAATCATTATAAGCGGATCTATCATCAGTCCCTCCAAAA
GTGGCCTGCAGAAGATACAAGTGATGACAAAGCAGAGGCCACGGATAATGATTCAGTGGA
ACTCGAGAAAAGTAACATTCTTCTAATGGGACCGACTGGCTCAGGGAAGACATTACTTGC
CAAAACCTTGGCACGGTTTGTGAATGTTCCCTTTGTTATTGCAGATGCCACTACACTCAC
TCAGGCAAGATATGTTGGGGAAGATGTGGAATCTATATTATACAAGCTCCTCATGGTTGC
TGACTATAATGTAGCAGCTGCCCAGCAGGGCATCGTTTACATTGATGAAGTTGACAAAAT
CACAAAGAAGGCTGAGAGCCTCAATCTTAGCAGAGATGTATCAGGGGAGGGTGTCCAACA
GGCTTTACTAAAAATGCTGGAAGGAACAGTTGTGAACGTCCCAGAAAAGGGAGCTCGAAA
GCACCCCAGAGGTGACAACATTCAGATTGACACAAAGGACATTCTCTTCATATGTGGGGG
TGCCTTCATTGATCTAGAGAAAACAATCTCTGAAAGACGCCAAGATTCTTCTATTGGGTT
TGGTGCACCAGTACGTGCAAACATGAGAACTGGTGGTCCGACAGATGCTGCTGTGGCATC
ATCATTATTGGAGACTGTTGAAAGCAGTGATCTTATTTCATACGGTTTAATACCTGAATT
TGTTGGGCGATTTCCAATCCTTGTTAGTTTGTCTGCTCTCACTGAGAACCAACTTGTTGA
GGTCCTAACAGAACCGAAAAATGCTCTGGGGAAGCAGTACAAGAAGATGTTCCAAATGAA
TGGAGTCAAGCTGCATTTCACAAAAAATGCTCTGAGATTAATTTCTAGAAAGGCAATGTC
CAAAAACACGGGTGCTCGAGGCTTAAGGTCCATATTAGAGAATATTTTGATGAATGCGAT
GTATGAGATCCCAGATGTGAGAACAGGAAATGATATCATTGATGCTGTAGTTGTTGATGA
TGAGGCTGTTGGCTCTGATGGACACGGATTTGGAGCCAAAATACTTTACGGAAAGGGTGC
ACTGGACTGCTATCTTTCACAACACAAATTAAAGGAGACAGAAACACCCATGGAGGGCTC
TTCTGATGGTGAAGCCGAGGCAGAGGCAGAAATTCCTTCCATTGTCGCCAGCATGTAAAC
CTCATGGTGGAGATCAATTCCTGTTCTCATACTTGTACATAATAAGTTTAAGCAGAAAAC
CATAATTTTTGAACGATTTAATTGGCAACCATGCTACAATTCTTGAAAGCTTTCAGTGTA
TCATTCAATTGTGCAGC