Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_16s0098g01780.t01
CDS Infomation	cds chromosome:12X:16:21844781:21851539:-1 gene:VIT_16s0098g01780 gene_biotype:protein_coding transcript_biotype:protein_coding description:Starch synthase, chloroplastic/amyloplastic [Source:UniProtKB/TrEMBL;Acc:F6H795]
Sequence	ATGGAGTCCCTGCAATCTCCTCTTGTTCTCTCGTCCAAACTTCTTCCAAATTCATTAAAA AAGCCAGTTTTAGAAGTGGGGTTTGCTTGCTTTTTCAAACAAAGAAGAGTCATCCAATCT GTTTCAATCAAAAGATCAGTTGTGTGCTGTAGCAGAAAAGGAGGAGGTGGTGGTTCTCAA GATGGGTCTTCTGCCATGCTAGTGAATACTGATAAGAAGGATGCCTCGGACTCTGTTGGG TTCCACTTGGTTCCTCCTCCATCCGGTGATAATGGAGTCATTGACCCTCATGAGAAGTTA TCTACTCAAAAAGAAGCAGAAACTGGAAACAGTGAAGGTGAGGAGGAAAGAAAAACCAAA GTGACCTACAATATTGTTTTTGTTACCTCTGAATCAGCACCATATTCAAAGACTGGAGGT CTAGGAGATGTCTGTGGTTCTTTGCCTATAGCTCTAGCTGCTCATGGGCATCGTGTAATG GTTGTATCACCTAGATACCAAAATGGTACTTGTTCAGATGAAATTTTTTCAGGTGCTTCA GATCTTGAGCACCCCATCAAGGTCCATTGCTTTGGAGGGGTGCAGGAAGTCTCCTTCTTC CATGAGTACAGAGCAGGTGTAGACTGGGTATTTGTGGACCACCCTTCATATCATAGACCA GGAAATCCATATGGTGATGGTTATGGCGCTTTTGGTGATAATCAGTTTCGGTTCACTTTA CTTTGCCATGCAGCATGTGAGGCTCCATTGGTGCTTCCATTGGGAGGGTTTACCTATGGG GAAAAATGTTTGTTTCTTGTTAATGATTGGCATGCAAGCCTAGTGCCAGTGCTTTTGGCT GCCAAGTATCGTCCACATGGAGTTTATAAAGATGCACGAACTGTTCTTGTAATACACAAC CTTGCACATCAGGGGGTGGAACCTGCAGTAACTTATGATAATTTGGGGCTGCCTCCTGAG TGGTATGGGGCTGTGGAATGGGTGTTTCCCACATGGGCAAGGACGCATGCTCTTGACACG GGCCAAGCTGTCAATCTTCTGAAGGGTGCTATTGTGACAGTTGATCGGATACTGACAGTT AGCAAGGGCTATGCTTGGGAAGTAACAACTCCCGAAGGTGGATATGGTCTGCATGAGCTC CTGACCAGTCGAAAAGCTGTTATAAATGGGATCACAAATGGTATTGATGTTTCCGAATGG GATCCATCCTCAGATGAGCATATTCCTTTCCATTACTCTGCTGAAGATCTCTCTGGGAAG GTTCAATGCAAGATTGCTTTGCAGAAGGAATTAAGCCTGCCCATTAGGCCGGATTGTCCA TTGATTGGATTCATTGGGAGATTGGACTACCAGAAAGGAATCGATGTGATTCGGTTGGCA ACTCCAGAGCTTATGGGAGAGGACGTCCAATTGGTCATGCTTGGGTCTGGGAACCCAGAG GACGAAGAGTGGATGAGAGTGATGGAATCAACATACAGGGACAAGTTCCGCGGTTGGGTT GGATTTAATGTCCCAATTTCTCATAGAATAACTGCAAGCTGTGACATCCTGTTGATGCCA TCAAGATTCGAACCTTGTGGACTAAACCAGCTCTATGCAATGAGATATGGGGCTGTACCA GTTGTACATGGCACTGGAGGACTCAGAGATACAGTAGAGAATTTCAATCCATATGCTGGA GGAGGCAGCGGTGAAGGAACCGGGTGGACGTTTTCTCCCCTGTCAAAAGACACTATGCTG GCGGCACTGAGAGTTGCTATCAGGACATACCGGGAACACAAGCCCTCCTGGGAGAGGTTG ATGAAGAGAGGAATGGAGAAAGATTATACATGGGATAAAGCTGCACTTGAATACGAGCAG GTCTTCAAATGGGCCTTCATCGATCCGCCTTACGTTAGCTAG

Peptide Sequence

PEP ID	VIT_16s0098g01780.t01
PEP Infomation	pep chromosome:12X:16:21844781:21851539:-1 gene:VIT_16s0098g01780 transcript:VIT_16s0098g01780.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Starch synthase, chloroplastic/amyloplastic [Source:UniProtKB/TrEMBL;Acc:F6H795]
Sequence	MESLQSPLVLSSKLLPNSLKKPVLEVGFACFFKQRRVIQSVSIKRSVVCCSRKGGGGGSQ DGSSAMLVNTDKKDASDSVGFHLVPPPSGDNGVIDPHEKLSTQKEAETGNSEGEEERKTK VTYNIVFVTSESAPYSKTGGLGDVCGSLPIALAAHGHRVMVVSPRYQNGTCSDEIFSGAS DLEHPIKVHCFGGVQEVSFFHEYRAGVDWVFVDHPSYHRPGNPYGDGYGAFGDNQFRFTL LCHAACEAPLVLPLGGFTYGEKCLFLVNDWHASLVPVLLAAKYRPHGVYKDARTVLVIHN LAHQGVEPAVTYDNLGLPPEWYGAVEWVFPTWARTHALDTGQAVNLLKGAIVTVDRILTV SKGYAWEVTTPEGGYGLHELLTSRKAVINGITNGIDVSEWDPSSDEHIPFHYSAEDLSGK VQCKIALQKELSLPIRPDCPLIGFIGRLDYQKGIDVIRLATPELMGEDVQLVMLGSGNPE DEEWMRVMESTYRDKFRGWVGFNVPISHRITASCDILLMPSRFEPCGLNQLYAMRYGAVP VVHGTGGLRDTVENFNPYAGGGSGEGTGWTFSPLSKDTMLAALRVAIRTYREHKPSWERL MKRGMEKDYTWDKAALEYEQVFKWAFIDPPYVS

Transcript Sequence

Transcript ID	VIT_16s0098g01780.t01
Transcript Infomation	cdna chromosome:12X:16:21844781:21851539:-1 gene:VIT_16s0098g01780 gene_biotype:protein_coding transcript_biotype:protein_coding description:Starch synthase, chloroplastic/amyloplastic [Source:UniProtKB/TrEMBL;Acc:F6H795]
Sequence	GAGGATTCTCCGTTTAGATTTTCTCTCACTTTCCCAGATTTTCTCTCTTCCTTTTCACAA GAACATGTGAGCCCTTGCTTTACAGCTCTCCCTCTCCTTCTCTCTCTCTCTCCTTCTCTT TCTCTGTCTAACATGGAGTCCCTGCAATCTCCTCTTGTTCTCTCGTCCAAACTTCTTCCA AATTCATTAAAAAAGCCAGTTTTAGAAGTGGGGTTTGCTTGCTTTTTCAAACAAAGAAGA GTCATCCAATCTGTTTCAATCAAAAGATCAGTTGTGTGCTGTAGCAGAAAAGGAGGAGGT GGTGGTTCTCAAGATGGGTCTTCTGCCATGCTAGTGAATACTGATAAGAAGGATGCCTCG GACTCTGTTGGGTTCCACTTGGTTCCTCCTCCATCCGGTGATAATGGAGTCATTGACCCT CATGAGAAGTTATCTACTCAAAAAGAAGCAGAAACTGGAAACAGTGAAGGTGAGGAGGAA AGAAAAACCAAAGTGACCTACAATATTGTTTTTGTTACCTCTGAATCAGCACCATATTCA AAGACTGGAGGTCTAGGAGATGTCTGTGGTTCTTTGCCTATAGCTCTAGCTGCTCATGGG CATCGTGTAATGGTTGTATCACCTAGATACCAAAATGGTACTTGTTCAGATGAAATTTTT TCAGGTGCTTCAGATCTTGAGCACCCCATCAAGGTCCATTGCTTTGGAGGGGTGCAGGAA GTCTCCTTCTTCCATGAGTACAGAGCAGGTGTAGACTGGGTATTTGTGGACCACCCTTCA TATCATAGACCAGGAAATCCATATGGTGATGGTTATGGCGCTTTTGGTGATAATCAGTTT CGGTTCACTTTACTTTGCCATGCAGCATGTGAGGCTCCATTGGTGCTTCCATTGGGAGGG TTTACCTATGGGGAAAAATGTTTGTTTCTTGTTAATGATTGGCATGCAAGCCTAGTGCCA GTGCTTTTGGCTGCCAAGTATCGTCCACATGGAGTTTATAAAGATGCACGAACTGTTCTT GTAATACACAACCTTGCACATCAGGGGGTGGAACCTGCAGTAACTTATGATAATTTGGGG CTGCCTCCTGAGTGGTATGGGGCTGTGGAATGGGTGTTTCCCACATGGGCAAGGACGCAT GCTCTTGACACGGGCCAAGCTGTCAATCTTCTGAAGGGTGCTATTGTGACAGTTGATCGG ATACTGACAGTTAGCAAGGGCTATGCTTGGGAAGTAACAACTCCCGAAGGTGGATATGGT CTGCATGAGCTCCTGACCAGTCGAAAAGCTGTTATAAATGGGATCACAAATGGTATTGAT GTTTCCGAATGGGATCCATCCTCAGATGAGCATATTCCTTTCCATTACTCTGCTGAAGAT CTCTCTGGGAAGGTTCAATGCAAGATTGCTTTGCAGAAGGAATTAAGCCTGCCCATTAGG CCGGATTGTCCATTGATTGGATTCATTGGGAGATTGGACTACCAGAAAGGAATCGATGTG ATTCGGTTGGCAACTCCAGAGCTTATGGGAGAGGACGTCCAATTGGTCATGCTTGGGTCT GGGAACCCAGAGGACGAAGAGTGGATGAGAGTGATGGAATCAACATACAGGGACAAGTTC CGCGGTTGGGTTGGATTTAATGTCCCAATTTCTCATAGAATAACTGCAAGCTGTGACATC CTGTTGATGCCATCAAGATTCGAACCTTGTGGACTAAACCAGCTCTATGCAATGAGATAT GGGGCTGTACCAGTTGTACATGGCACTGGAGGACTCAGAGATACAGTAGAGAATTTCAAT CCATATGCTGGAGGAGGCAGCGGTGAAGGAACCGGGTGGACGTTTTCTCCCCTGTCAAAA GACACTATGCTGGCGGCACTGAGAGTTGCTATCAGGACATACCGGGAACACAAGCCCTCC TGGGAGAGGTTGATGAAGAGAGGAATGGAGAAAGATTATACATGGGATAAAGCTGCACTT GAATACGAGCAGGTCTTCAAATGGGCCTTCATCGATCCGCCTTACGTTAGCTAGAAACAA ACCCAGAAGAAGAAAAAGAAGCAAACGAAAAGGAATACACCATAGATTGCGGAGTGTTAG TTCTTCCATGTATATAGAGGAGGGGGAGGATTATATAACACTTTCTTTTTTGCCCATGTC CAAGACTGGTTCAAGTTTTTTTCCATTCTTTTTCCTTGTCAAACCCCTTTTTGATTGATT AATAATTATATTCTTGATTC