Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0098g01570.t01
CDS Infomation

cds chromosome:12X:16:21733789:21737586:1 gene:VIT_16s0098g01570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGGAGAGTGGCAGCAGCTGATTCAATCAGTGTTCTTCGGTCTGGTTTTCTCCTAC
CTTTTCGCGAAGCTCATATCGATTGTAATCTCCTTCCGAGACGAGAACCTCAGCTTGACC
CGTGATTCCAAGCCCGAATCGCAGGGAGGAGCCGCCTCTGCCGATGACGACTCCGCGGGG
TCTCAGAAATCTGGGGGTTCGGAAGGGGAGGAGTCGCTGCTGGCGGAGAAGGGGAGTGGG
AGTAGTGGGAGTCTGTTGGATGACGATGATGATTGGGAGGGGGTGGAGAGTACTGAATTG
GACGAGGAGTTCAGTGCTGCGACGGCTTTCGTGGCCGCCACGGCGGCGGATAGGCTGTCG
CAGAAGGTGTCGAATGATGTGCAGTTGCAGCTTTATGGGCTTTACAAGATCGCGACCGAG
GGACCGTGCAGTGCCCCGCAGCCATCAGCTTTGAAAATGACAGCTCGGGCTAAATGGCAA
GCATGGCAGAAATTGGGTGCTATGCCTCCTGAAGAAGCAATGCAGAAGTACATTGCAATT
GTTACAGAGCTATATCCTACTTGGGCAACTGGTTCAACTAATAAGAGTAAAGATGAGGGA
GGTAGCAGTGCACCAAGTGGAGATGCTAAAGGACCAATGGGGCCGGTTTTCAGCACATTT
GTCTATGAGGAGGAATGTGGAACTGAGCTGAAAATGGATGCTATACATGCGTTTGCCAGA
GAAGGAGAGGTAGATAATCTGCTCAAATGTATTGATAACGGCGTTTCAGTGGATCTAAAG
GATAGTGAGGGAAGAACCCCATTGCACTGGGCTGTAGATCGTGGCCACCTTAATCTCACT
GAATTGCTTCTCAACCATGGTGCTGATGTGAATGCCAAGGACCATGAAGGCCAATCCCCA
TTGCATTACGCAGTCGTGTGTGAGAGAGAAGCTATTGCTGAGTTCCTTGTGAAGCAAAAT
GCAGACATCAACGCAATGGACAATGATGGTGCATCCCCTTTTGAACTGTGCGAATCAAAC
TGGCCTTGGATGCAAGGTGCAGCTAAACAGGCTTAG

Peptide Sequence

PEP ID

VIT_16s0098g01570.t01
PEP Infomation

pep chromosome:12X:16:21733789:21737586:1 gene:VIT_16s0098g01570 transcript:VIT_16s0098g01570.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEGEWQQLIQSVFFGLVFSYLFAKLISIVISFRDENLSLTRDSKPESQGGAASADDDSAG
SQKSGGSEGEESLLAEKGSGSSGSLLDDDDDWEGVESTELDEEFSAATAFVAATAADRLS
QKVSNDVQLQLYGLYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIAI
VTELYPTWATGSTNKSKDEGGSSAPSGDAKGPMGPVFSTFVYEEECGTELKMDAIHAFAR
EGEVDNLLKCIDNGVSVDLKDSEGRTPLHWAVDRGHLNLTELLLNHGADVNAKDHEGQSP
LHYAVVCEREAIAEFLVKQNADINAMDNDGASPFELCESNWPWMQGAAKQA

Transcript Sequence

Transcript ID

VIT_16s0098g01570.t01
Transcript Infomation

cdna chromosome:12X:16:21733789:21737586:1 gene:VIT_16s0098g01570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCTCTAGACGTAACTCTCTGGATTTTCTCTCTACCCTTCTAGGATTTCAATCTCACAAT
TGCAATTTTCTCTCCTTTTCTTCTCCTTTCTCTGTTTTTTTTTTCTTTAATCCCTAGGGT
TTTCTTACGCTCTCTACGGGTTTTTTTTTTTTTCTTTTCAACATTTTTAATTCTAGGGTT
TCCGTACAATCCTCCCTAGGGTTTTAACGCCATGGAAGGAGAGTGGCAGCAGCTGATTCA
ATCAGTGTTCTTCGGTCTGGTTTTCTCCTACCTTTTCGCGAAGCTCATATCGATTGTAAT
CTCCTTCCGAGACGAGAACCTCAGCTTGACCCGTGATTCCAAGCCCGAATCGCAGGGAGG
AGCCGCCTCTGCCGATGACGACTCCGCGGGGTCTCAGAAATCTGGGGGTTCGGAAGGGGA
GGAGTCGCTGCTGGCGGAGAAGGGGAGTGGGAGTAGTGGGAGTCTGTTGGATGACGATGA
TGATTGGGAGGGGGTGGAGAGTACTGAATTGGACGAGGAGTTCAGTGCTGCGACGGCTTT
CGTGGCCGCCACGGCGGCGGATAGGCTGTCGCAGAAGGTGTCGAATGATGTGCAGTTGCA
GCTTTATGGGCTTTACAAGATCGCGACCGAGGGACCGTGCAGTGCCCCGCAGCCATCAGC
TTTGAAAATGACAGCTCGGGCTAAATGGCAAGCATGGCAGAAATTGGGTGCTATGCCTCC
TGAAGAAGCAATGCAGAAGTACATTGCAATTGTTACAGAGCTATATCCTACTTGGGCAAC
TGGTTCAACTAATAAGAGTAAAGATGAGGGAGGTAGCAGTGCACCAAGTGGAGATGCTAA
AGGACCAATGGGGCCGGTTTTCAGCACATTTGTCTATGAGGAGGAATGTGGAACTGAGCT
GAAAATGGATGCTATACATGCGTTTGCCAGAGAAGGAGAGGTAGATAATCTGCTCAAATG
TATTGATAACGGCGTTTCAGTGGATCTAAAGGATAGTGAGGGAAGAACCCCATTGCACTG
GGCTGTAGATCGTGGCCACCTTAATCTCACTGAATTGCTTCTCAACCATGGTGCTGATGT
GAATGCCAAGGACCATGAAGGCCAATCCCCATTGCATTACGCAGTCGTGTGTGAGAGAGA
AGCTATTGCTGAGTTCCTTGTGAAGCAAAATGCAGACATCAACGCAATGGACAATGATGG
TGCATCCCCTTTTGAACTGTGCGAATCAAACTGGCCTTGGATGCAAGGTGCAGCTAAACA
GGCTTAGAATGGTGGTTTTTTTTTTAAAGTTATCCCACCAATTAATGCAAATCCTCTTGA
TAGGTTCCTGGTGGATGTACATGCTGTTATGTATAACCCTTTCACACAGCTTAACCTTTT
TCATCATCATGGTATAATTTATTATATAGGGTTTTATGTTCTTTCCACTGTTTTTCTTTT
ACTTAAACGATTGAATTAGGATGAATTTGAAGCAGATTGAATTTAGAATGTGAATTGGCA