Plant GARDEN How To ▶︎

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Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0098g01320.t01

CDS Infomation

cds chromosome:12X:16:21583560:21588780:1 gene:VIT_16s0098g01320 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:E0CV89]

Sequence

ATGGAGAAGGATGCAAATGTTACTGTCTCACTTGTTCCAGCCTCAGAGTTACTCTCTCAG
ACTATCCTGACTGTCTTTGACACTGTACATGCTGCCAAAGCAGTCATCATTCAAGATGCG
AATTTCCAGCAATTCGCAATTTACTTGGAGATGGTCACAGTGGTCCTGAAAGAGTTGGCC
AATCTAAAGATAGAGGATTCTGAGAGGTTAAAAATTGCTGTTGCAAATCTTAATCGAGAG
ATTAAGGTTGCAAAGCAGCTAACTGTGGAGTGTGGGAAGAGAAACAAGATCTATCTCTTA
GTCAATTGCCAGAGAATTTCCAAGGACTTAGAGTGTATCACAAAAGAGATTAGTCGGGTT
CTAGGCCTTATTCCTGATATTTCATTCAATATTAATGATAAGATTAGTAAACTACGCAAG
GATATGTTAGATTCCAAGTATCAAGCAACTGCAGTGGAGGAAGAAATTCTGGAAAAAATT
GAAACTGGTATACGGGAGAGGAATGTCGACAAATCCTATGCAAATAATTTGCTCCTCTGT
ATTGCTGAGGCTGCTGGGATTTCAACTGAGCAGTCAGTATTGAAGAGAGAGTTAGAAGAA
TTCAAGAGTGAAATAGAGGATGTGAACCTCAGAGAAGACAGTGCAGAAGCTTTAAAAATG
GGAAAGATTGTTGCATTGCTTGCAAAAGCAGATGCTGCCACATCTCCTGAGGAGAAAGAA
ATCAAATATTTTAATCAGCGAAATTCTTTGGGTACGCAACGACTGGAACCTCTACATGCA
TTCTACTGTTCAATCACTCATGATGTCATGGTGGATCCTGTGGAAACTTCCTCAGGGCAG
ACATTTGAGAGAAGTGCAATAGAGAAGTGGATTGCAGAAGGGAATAAGCTCTGTCCATTG
ACAGCGACTCCCTTGGACATGTCAGCTTTACGACCTAACAAAATTCTTCGACAATCAATT
GAAGAATGGAAGGATAGGAACACCATGATTATGCTTGCTTCTCTCAAACCTGCACTCCAT
TCAAATGATGAGCAAGAAGTTCTTCAATCTCTGGGCAAGCTGCATGATCTATGTATTGAA
CGAGAGTTGCACCGTGAATGGGTAATGATGGAGGAGTACTGTCCAATTCTTATTGGACTT
CTTGGTGCAAAAAACCGTGAAATAAGAAAACTTTCTCTAGTCATCCTTTGCATTCTTGCA
AAGGATAGCAATGAGAATAAGGAAAGAATTGCTAGAGTGAATAATGCAATTGAATCAATT
GTTCGTTCCCTTGCCCGCCAGATTGGGGAAAGCAAGTTAGCGTTGCAATTACTATTGGAG
CTATCAAGAAGTAATCTAGTGCGTGACTTCATCGGCAATGTTCAGGGTTGCATATTTCTC
TTAGTGACTATCTCCAGTGGTGATGATACTCAAGCTGCCATAGATGCAAAGGAGCTTTTG
GAAAATCTCTCTTTTCTTGATCAGAATGTTATTCAGATGGCAAGGGCAAATTATTTTAAA
CCTTTGTTGCGCCTTCTTTCTTCAGGGCCAGTGAATGCTAAAATGACTGTGGCTGCTACT
TTGTCAGAGATTGAGTTAACTGACAATAATAAATTGAGTCTATTTGAAGATGGAGCACTT
CAGCCACTTCTAGTATTGCTCTCACATAGCGATATGGAGATGAAGAAAGTGGCTGTTAAA
GCTCTTTATAACCTCTCCAGTGTGCCACAAAATGGATTGCGGATGATTAGAGAAGGTGCT
GCAGGCCCATTGTTTGAACTTCTCTACCGTCACAGCTTGTCTTCCCCAAGTTTGCGTGGA
GAGGTGGCAGTTATCATTATGCACCTTGCAATATCAACCACAACCCTGGAAGCTGATCAA
ATGCATGTTTCATTGTTGGAATCTGAGGAAGATATATTCAAGCTTTTCTCTCTCATATCC
TTGACAGGACCTGACATACAACAAATTATTCTCCGAACTTTTCATGCTATGTGTCAATCT
CATTCTGGTTTAGACATCAGAACTAAGTTAAGGCAGCTCTCTTCTGTTCGAGTACTAGTT
CAATTATGCGAGTTTGACAACCATACAGTACGTGCAAATGCTGTGAAGCTCTTTTGTTGC
TTGACAGAAGATGGTGAAGACAGTACCTTTGTAGAGCATGTGAGCCAGAGATACATAGAG
ACATTAATCAGAATAATCAAAACTTCTGATAATGTGGAAGAGATTGCTGGTGCAATGAGT
ATCATCTCTAACCTTCCTAAGGAGGCCCATATAACCCAGTGGCTTCTTGATGCCGGAGCT
CTTCAAATCATTTTTACTTGTCTTACTGATGGAAATAGTAGTGCTTCATACAAAAGGCAA
TTAATTGAGAATGCTGTTGGCGCTCTTTGTCGTTTCACTGTTTCAACAAATCAGAATTGG
CAAAAGGAGGTAGCCAAATGTGGTTTTTTCCCAATCCTGCTACAGTTTCTAGATTCTGGA
ACAGCTTTGACAAAGAGAAATGCAGCAGTTTCACTTAAGCAATTTTCAGAAAGTTCCAAT
GGCTTAAGCCAACCAGTGAAGAAGCATGGAGCTTTTTGGTGCTGTTTGGCCTCTCGTGAA
ACTGGTTGCCGAGTGCACTTAGGCATCTGTACAGTTGAGTCCTCATTTTGTCTTTTGGAG
GCTAATGCTGTAGAACCCCTAGTGAGGGTGCTTGTGGAACCAGATGTTGGAGCTTGTGAA
GCTTCTTTAGATGCACTTTTGACATTGATTGACGGTGAAAGATTGCAAAATGGGAGTAAG
GTGCTTTCTGAAGTTAATGCTATTGTTCCAATTATAAGGTTATTGAGTTCATCGTGTACC
AAGTTGCAGGAGAAAGCTCTGAAGGCTTTAGAAAGGATCTTTCGACTAATTGATTTCAAA
CAGAAGTATGGGAATTTAGCCCAAATGCCATTAGTTGACATTACTCAGAGGGGACATGGT
GGTATGAAATCCTTAGCTGCCAAAGTACTTGCTCACTTGGATGTGCTCCATGAACAATCT
TCTTACTTCTAA

Peptide Sequence

PEP ID

VIT_16s0098g01320.t01

PEP Infomation

pep chromosome:12X:16:21583560:21588780:1 gene:VIT_16s0098g01320 transcript:VIT_16s0098g01320.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:E0CV89]

Sequence

MEKDANVTVSLVPASELLSQTILTVFDTVHAAKAVIIQDANFQQFAIYLEMVTVVLKELA
NLKIEDSERLKIAVANLNREIKVAKQLTVECGKRNKIYLLVNCQRISKDLECITKEISRV
LGLIPDISFNINDKISKLRKDMLDSKYQATAVEEEILEKIETGIRERNVDKSYANNLLLC
IAEAAGISTEQSVLKRELEEFKSEIEDVNLREDSAEALKMGKIVALLAKADAATSPEEKE
IKYFNQRNSLGTQRLEPLHAFYCSITHDVMVDPVETSSGQTFERSAIEKWIAEGNKLCPL
TATPLDMSALRPNKILRQSIEEWKDRNTMIMLASLKPALHSNDEQEVLQSLGKLHDLCIE
RELHREWVMMEEYCPILIGLLGAKNREIRKLSLVILCILAKDSNENKERIARVNNAIESI
VRSLARQIGESKLALQLLLELSRSNLVRDFIGNVQGCIFLLVTISSGDDTQAAIDAKELL
ENLSFLDQNVIQMARANYFKPLLRLLSSGPVNAKMTVAATLSEIELTDNNKLSLFEDGAL
QPLLVLLSHSDMEMKKVAVKALYNLSSVPQNGLRMIREGAAGPLFELLYRHSLSSPSLRG
EVAVIIMHLAISTTTLEADQMHVSLLESEEDIFKLFSLISLTGPDIQQIILRTFHAMCQS
HSGLDIRTKLRQLSSVRVLVQLCEFDNHTVRANAVKLFCCLTEDGEDSTFVEHVSQRYIE
TLIRIIKTSDNVEEIAGAMSIISNLPKEAHITQWLLDAGALQIIFTCLTDGNSSASYKRQ
LIENAVGALCRFTVSTNQNWQKEVAKCGFFPILLQFLDSGTALTKRNAAVSLKQFSESSN
GLSQPVKKHGAFWCCLASRETGCRVHLGICTVESSFCLLEANAVEPLVRVLVEPDVGACE
ASLDALLTLIDGERLQNGSKVLSEVNAIVPIIRLLSSSCTKLQEKALKALERIFRLIDFK
QKYGNLAQMPLVDITQRGHGGMKSLAAKVLAHLDVLHEQSSYF

Transcript Sequence

Transcript ID

VIT_16s0098g01320.t01

Transcript Infomation

cdna chromosome:12X:16:21583560:21588780:1 gene:VIT_16s0098g01320 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:E0CV89]

Sequence

ATGGAGAAGGATGCAAATGTTACTGTCTCACTTGTTCCAGCCTCAGAGTTACTCTCTCAG
ACTATCCTGACTGTCTTTGACACTGTACATGCTGCCAAAGCAGTCATCATTCAAGATGCG
AATTTCCAGCAATTCGCAATTTACTTGGAGATGGTCACAGTGGTCCTGAAAGAGTTGGCC
AATCTAAAGATAGAGGATTCTGAGAGGTTAAAAATTGCTGTTGCAAATCTTAATCGAGAG
ATTAAGGTTGCAAAGCAGCTAACTGTGGAGTGTGGGAAGAGAAACAAGATCTATCTCTTA
GTCAATTGCCAGAGAATTTCCAAGGACTTAGAGTGTATCACAAAAGAGATTAGTCGGGTT
CTAGGCCTTATTCCTGATATTTCATTCAATATTAATGATAAGATTAGTAAACTACGCAAG
GATATGTTAGATTCCAAGTATCAAGCAACTGCAGTGGAGGAAGAAATTCTGGAAAAAATT
GAAACTGGTATACGGGAGAGGAATGTCGACAAATCCTATGCAAATAATTTGCTCCTCTGT
ATTGCTGAGGCTGCTGGGATTTCAACTGAGCAGTCAGTATTGAAGAGAGAGTTAGAAGAA
TTCAAGAGTGAAATAGAGGATGTGAACCTCAGAGAAGACAGTGCAGAAGCTTTAAAAATG
GGAAAGATTGTTGCATTGCTTGCAAAAGCAGATGCTGCCACATCTCCTGAGGAGAAAGAA
ATCAAATATTTTAATCAGCGAAATTCTTTGGGTACGCAACGACTGGAACCTCTACATGCA
TTCTACTGTTCAATCACTCATGATGTCATGGTGGATCCTGTGGAAACTTCCTCAGGGCAG
ACATTTGAGAGAAGTGCAATAGAGAAGTGGATTGCAGAAGGGAATAAGCTCTGTCCATTG
ACAGCGACTCCCTTGGACATGTCAGCTTTACGACCTAACAAAATTCTTCGACAATCAATT
GAAGAATGGAAGGATAGGAACACCATGATTATGCTTGCTTCTCTCAAACCTGCACTCCAT
TCAAATGATGAGCAAGAAGTTCTTCAATCTCTGGGCAAGCTGCATGATCTATGTATTGAA
CGAGAGTTGCACCGTGAATGGGTAATGATGGAGGAGTACTGTCCAATTCTTATTGGACTT
CTTGGTGCAAAAAACCGTGAAATAAGAAAACTTTCTCTAGTCATCCTTTGCATTCTTGCA
AAGGATAGCAATGAGAATAAGGAAAGAATTGCTAGAGTGAATAATGCAATTGAATCAATT
GTTCGTTCCCTTGCCCGCCAGATTGGGGAAAGCAAGTTAGCGTTGCAATTACTATTGGAG
CTATCAAGAAGTAATCTAGTGCGTGACTTCATCGGCAATGTTCAGGGTTGCATATTTCTC
TTAGTGACTATCTCCAGTGGTGATGATACTCAAGCTGCCATAGATGCAAAGGAGCTTTTG
GAAAATCTCTCTTTTCTTGATCAGAATGTTATTCAGATGGCAAGGGCAAATTATTTTAAA
CCTTTGTTGCGCCTTCTTTCTTCAGGGCCAGTGAATGCTAAAATGACTGTGGCTGCTACT
TTGTCAGAGATTGAGTTAACTGACAATAATAAATTGAGTCTATTTGAAGATGGAGCACTT
CAGCCACTTCTAGTATTGCTCTCACATAGCGATATGGAGATGAAGAAAGTGGCTGTTAAA
GCTCTTTATAACCTCTCCAGTGTGCCACAAAATGGATTGCGGATGATTAGAGAAGGTGCT
GCAGGCCCATTGTTTGAACTTCTCTACCGTCACAGCTTGTCTTCCCCAAGTTTGCGTGGA
GAGGTGGCAGTTATCATTATGCACCTTGCAATATCAACCACAACCCTGGAAGCTGATCAA
ATGCATGTTTCATTGTTGGAATCTGAGGAAGATATATTCAAGCTTTTCTCTCTCATATCC
TTGACAGGACCTGACATACAACAAATTATTCTCCGAACTTTTCATGCTATGTGTCAATCT
CATTCTGGTTTAGACATCAGAACTAAGTTAAGGCAGCTCTCTTCTGTTCGAGTACTAGTT
CAATTATGCGAGTTTGACAACCATACAGTACGTGCAAATGCTGTGAAGCTCTTTTGTTGC
TTGACAGAAGATGGTGAAGACAGTACCTTTGTAGAGCATGTGAGCCAGAGATACATAGAG
ACATTAATCAGAATAATCAAAACTTCTGATAATGTGGAAGAGATTGCTGGTGCAATGAGT
ATCATCTCTAACCTTCCTAAGGAGGCCCATATAACCCAGTGGCTTCTTGATGCCGGAGCT
CTTCAAATCATTTTTACTTGTCTTACTGATGGAAATAGTAGTGCTTCATACAAAAGGCAA
TTAATTGAGAATGCTGTTGGCGCTCTTTGTCGTTTCACTGTTTCAACAAATCAGAATTGG
CAAAAGGAGGTAGCCAAATGTGGTTTTTTCCCAATCCTGCTACAGTTTCTAGATTCTGGA
ACAGCTTTGACAAAGAGAAATGCAGCAGTTTCACTTAAGCAATTTTCAGAAAGTTCCAAT
GGCTTAAGCCAACCAGTGAAGAAGCATGGAGCTTTTTGGTGCTGTTTGGCCTCTCGTGAA
ACTGGTTGCCGAGTGCACTTAGGCATCTGTACAGTTGAGTCCTCATTTTGTCTTTTGGAG
GCTAATGCTGTAGAACCCCTAGTGAGGGTGCTTGTGGAACCAGATGTTGGAGCTTGTGAA
GCTTCTTTAGATGCACTTTTGACATTGATTGACGGTGAAAGATTGCAAAATGGGAGTAAG
GTGCTTTCTGAAGTTAATGCTATTGTTCCAATTATAAGGTTATTGAGTTCATCGTGTACC
AAGTTGCAGGAGAAAGCTCTGAAGGCTTTAGAAAGGATCTTTCGACTAATTGATTTCAAA
CAGAAGTATGGGAATTTAGCCCAAATGCCATTAGTTGACATTACTCAGAGGGGACATGGT
GGTATGAAATCCTTAGCTGCCAAAGTACTTGCTCACTTGGATGTGCTCCATGAACAATCT
TCTTACTTCTAATGGATGGTGGGTGATGGAGTTTGTTATAGTTTAGCATAATGCCATTTC
TGTGAGTACCATGTGAAGAAAGCCTTTCTGGATATGCAAATTAGATTCCATCCTTAACCA
CAATGGGAGGCTACATTGAACATCCCTGATAAGGAATATAGAGGTTTGTACTTGCCACAT
CCAATGGAGATTCTGCTAGTGCACTCAAATTGTTTTTTCAGTAGCACATAACAAGGTATG
TCTGTATACTATGTGTACTATGTATTTTATGAAATGATATAATTTTTATTCCTTCCTGTT