Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0098g00870.t01
CDS Infomation

cds chromosome:12X:16:21201347:21203802:1 gene:VIT_16s0098g00870 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD-repeat 1 [Source:UniProtKB/TrEMBL;Acc:Q19N39]
Sequence

ATGGAGAGATCAAGCCAAGAATCCCACCTGAGATCTGAAAACTGCGTCACATACGAGTCC
CCGTACCCACTTTACTCCATGGCAATCTCTTCTTCAACCCAGCACCACCACCCCCGCATC
GCCATTGGCAGCTTCATCGAAGAACTCAGCAACAGGGTCGACATCGTCTCCTTCGACGAA
GACGCCCTAGCAATCAGGACCCACCCCAGCCTCTCCTTCGACCACCCTTACCCACCCACC
AAGCTCATGTTCCACCCCAACTCCCGCACATCCCCGGATCACCTCGCCTCCTCCGGCGAA
TACCTCCGTCTCTGGGAAGTTCGCGACAATTCGATTCAACCCCTCTCGGTTCTCAACAAC
AGCAAAACCAGCGAGTTCTGCGCCCCATTAACATCCTTCGATTGGAACGAGGTCGAGCCT
CGGAGAATTGGGACATCCAGCATCGACACCACTTGTACCATCTGGGACGTGGAGAGGGGT
GTTGTTGAAACCCAGCTGATTGCCCACGATAAGGAGGTGTACGACATTGCTTGGGGTGAA
GCAGGGGTTTTCGCCTCGGTTTCCGCTGATGGGTCAGTGAGAATTTTCGATTTGAGGGAT
AAGGAGCACTCTACAATCATATACGAGAGCCCCCAGCCTGATACTCCATTGCTTAGATTG
GCCTGGAACAAGCAGGATGTGAGGTACATGGCTACCATTCTGATGGATAGTAATAAGATC
GTCATATTGGATATAAGGTCGCCAACAATGCCGGTTGCGGAGTTGGAGAGGCATCGGGCT
AGTGTCAATGCCATTTCTTGGGCTCCCCAGAGTTCCCGTCATATTTGTTCAGGAGGGGAT
GATTCACAGGCACTCATTTGGGAGTTGCCTACGCTTGCTGGACCCAATGGAATCGATCCA
ATGTCAGTATACTTGGCTTCGTCTGAAATTAACCAGCTGCAGTGGTCTGCAGCTCAGCCA
GAGTGGATTGCCATTGCCTTCTCCAACAAACTGCAGCTTCTTAAAGTTTAG

Peptide Sequence

PEP ID

VIT_16s0098g00870.t01
PEP Infomation

pep chromosome:12X:16:21201347:21203802:1 gene:VIT_16s0098g00870 transcript:VIT_16s0098g00870.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD-repeat 1 [Source:UniProtKB/TrEMBL;Acc:Q19N39]
Sequence

MERSSQESHLRSENCVTYESPYPLYSMAISSSTQHHHPRIAIGSFIEELSNRVDIVSFDE
DALAIRTHPSLSFDHPYPPTKLMFHPNSRTSPDHLASSGEYLRLWEVRDNSIQPLSVLNN
SKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDVERGVVETQLIAHDKEVYDIAWGE
AGVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDVRYMATILMDSNKI
VILDIRSPTMPVAELERHRASVNAISWAPQSSRHICSGGDDSQALIWELPTLAGPNGIDP
MSVYLASSEINQLQWSAAQPEWIAIAFSNKLQLLKV

Transcript Sequence

Transcript ID

VIT_16s0098g00870.t01
Transcript Infomation

cdna chromosome:12X:16:21201347:21203802:1 gene:VIT_16s0098g00870 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD-repeat 1 [Source:UniProtKB/TrEMBL;Acc:Q19N39]
Sequence

CTAAATTTCTCACCCGCCAAACACCACCAGGAAAATGGAGAGATCAAGCCAAGAATCCCA
CCTGAGATCTGAAAACTGCGTCACATACGAGTCCCCGTACCCACTTTACTCCATGGCAAT
CTCTTCTTCAACCCAGCACCACCACCCCCGCATCGCCATTGGCAGCTTCATCGAAGAACT
CAGCAACAGGGTCGACATCGTCTCCTTCGACGAAGACGCCCTAGCAATCAGGACCCACCC
CAGCCTCTCCTTCGACCACCCTTACCCACCCACCAAGCTCATGTTCCACCCCAACTCCCG
CACATCCCCGGATCACCTCGCCTCCTCCGGCGAATACCTCCGTCTCTGGGAAGTTCGCGA
CAATTCGATTCAACCCCTCTCGGTTCTCAACAACAGCAAAACCAGCGAGTTCTGCGCCCC
ATTAACATCCTTCGATTGGAACGAGGTCGAGCCTCGGAGAATTGGGACATCCAGCATCGA
CACCACTTGTACCATCTGGGACGTGGAGAGGGGTGTTGTTGAAACCCAGCTGATTGCCCA
CGATAAGGAGGTGTACGACATTGCTTGGGGTGAAGCAGGGGTTTTCGCCTCGGTTTCCGC
TGATGGGTCAGTGAGAATTTTCGATTTGAGGGATAAGGAGCACTCTACAATCATATACGA
GAGCCCCCAGCCTGATACTCCATTGCTTAGATTGGCCTGGAACAAGCAGGATGTGAGGTA
CATGGCTACCATTCTGATGGATAGTAATAAGATCGTCATATTGGATATAAGGTCGCCAAC
AATGCCGGTTGCGGAGTTGGAGAGGCATCGGGCTAGTGTCAATGCCATTTCTTGGGCTCC
CCAGAGTTCCCGTCATATTTGTTCAGGAGGGGATGATTCACAGGCACTCATTTGGGAGTT
GCCTACGCTTGCTGGACCCAATGGAATCGATCCAATGTCAGTATACTTGGCTTCGTCTGA
AATTAACCAGCTGCAGTGGTCTGCAGCTCAGCCAGAGTGGATTGCCATTGCCTTCTCCAA
CAAACTGCAGCTTCTTAAAGTTTAGTCTGTTGTGATAGTGGCATTCTGAGGGAGATGGTC
TCAGCTTCATGTTTTCTTGGTCAAGCACAAGGGCTAGCATGGCAGGAATTGCTCTCCAGA
TGCTTTGGTTCTTGATTCGGATGTTGTACTTCTGTAAGCATTTAGCTTCTCAAGGCCAGT
CATAGTTTGTTGTATTATTACGGATTTGCAGCCTTGTAGTTGTATATTTTAAACTTCAAG
AAGATAATTATTGCAGTGTCAA