Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0098g00350.t01
CDS Infomation

cds chromosome:12X:16:20769708:20783973:-1 gene:VIT_16s0098g00350 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone-lysine N-methyltransferase [Source:UniProtKB/TrEMBL;Acc:F6H7C9]
Sequence

ATGATAATTAAGCGCAATTTGAAATCGAAAATGCCGAGTATGAAACGATGCAGACTCGGC
CACTCGGCGGCGGACGACGATGAGTCGCCGGCGGCGAAGAAGAAGCGTAAGATGAATGGT
TATTTCCCTCTGAATCTGCTCGGGGACGTCGCAGCGGGGATAATTCCGTTGAGCGGGTAC
GGCCTTCAACGGATATTCGGCGGTCACGTCGGAGATGACGGAGACGGCGTGGGAGCTATG
AATCGTGCGGCTCAGGTTCACCGGCCGCCGCTGGTGAGGACGTCAAGGGGACGAGTTCAG
GTACTCCCATCTCGATTCAACGATTCAATTCTTGATAATTGGAGGAAAGAGAGCAAACCC
AATGCTCGTGAGATCATTCTAGATGAGGATTTCGAACCGGAAAAAGAAAAACCTTGTTCC
AAAACCCCGAAACAGAGTGTGAAAAAGGGGCTAAATGAGGGTAAATTTGGACACCAATGT
AGAAAATTCTCGGCATTGTGTCAAGAAGACGGAGATGAAATGGGGTATGTTGGGTTTAAG
AATGTTGGTACCAAGAAGAAGTATTCCAGTTCGCGCAGTTCACTTACTTCTCTGCATGAG
CAATTGGCAGAGGTCGAGCGGTATCCAACTGACGAAGTTGAGGAAAAGTTCGGTTTGGGA
AGAGTCGATAGAGAGAGTAAAGGTGGTAGTAGGTTAGAGGAGTTTATTTCAGGTGATATA
GTATGGGCGAAGTCGGGGAAGAAGGATCCTTTCTGGCCTGCCATTGTCATTGATCCAACC
TCGCAAGCACCCGGGCAAGTTTTGAGTTCATGTATTGCTGGCGCAGTTTGTGTAATGTTC
TTTGGCTATTCTGGAAATGGGAGTCGAGATTATGGGTGGATTAAGCGTGGGATGATATTT
TCATTCATAGATAATGTAGAAAGGTTCCAGGGACAAAGTGACTTGAATGATTGTAAGCCC
AGTGATTTTCGGACAGCTATAGAGGAGGCATTTCTTGCAGAAAATGGTTTTATTGAGAAG
CTGACAGAGGATATAAATGTGGCTTCTGGGAAACCCAATTATCTTGAATCCACTAGAGGG
ATCCAAGAGGCTACTGGTTCGAATCAGGATCAAGAATGCGATTCTCAGGACCAGGCAAGT
GGTGATGTATTTAGGAAGAAGGACACATGGTCTTGTGATGGCTGCGGCTTGAGAATTCCT
CTTAAAAGTACAAAGAAAATGAAAGTTTTGACTCCTAAAGGCCGTTTTCTATGTAAAACC
TGTGATAGGTTGTTAAAATCCAAACAGTATTGTGGCATATGCAAGAAGATGCAGAATCAA
TCAGACAGTGGGACTTGGGTGCGCTGTGATGGTTGCAAAGTTTGGGTGCATGCAGAGTGT
GGTAAAATTTCCAGTAAACTTTTCAAGAATCTTGGGGCTACTGATTATTACTGCCCTGCT
TGCAAAGCAAAGTTTAATTTTGAATTGTCAGATTCAGAAAGATGGCAGCCTAAAGTCAAA
TGCAACAAAAACAACAGTCAATTAGTGCTGCCTAACAAGGTTACAGTTACTTGCTCGGGT
GTGGAAGGCATATATTTCCCAAGCATTCATTTAGTTGTGTGCAAGTGTGGGTCATGCGGG
ATGGAAAAGCAATCACTTACTGAATGGGAGCGTCACACAGGTTCCAAAGGGAAAAATTGG
AAGACAAGTGTTAGGGTAAAAGGTTCCATGTTGTCATTGGAGCAATGGATGCTGCAGGTT
GCAGAGTATCATGATAATAGTTTTCTTGCTGTTAACCCTCCTAAACGACCTTCTATAAGA
GAACGAAGACAGAAGTTGCTTACTTTTTTGCAAGATACTTTAGAAGCTGCTGTCACCGAT
GAATCAACTGATTGCATTCCTACTTCCGTTGTGACAGAAAAATATGAGCCTGTTCATGCT
AGGTGGACAACAGAACGATGTGCTGTATGTAGATGGGTTGAAGATTGGGACTACAACAAA
ATTATTATATGCAACAGATGTCAAATAGCCGTCCATCAAGAGTGTTATGGGGCAAGAAAT
GTTCGGGATTTCACTTCATGGGTTTGCAGAGCATGTGAAACACCTGATGTTGAGCGGGAG
TGTTGCCTTTGTCCTGTAAAAGGTGGTGCTCTAAAGCCAACTGATATTGAGACATTATGG
GTTCATGTCACTTGTGCTTGGTTTCAACCTGAAGTTTCTTTCTCAAGTGATGAAAAGATG
GAGCCTGCTGTTGGCATCTTGAGCATTCCATCAAATTCTTTTATAAAGATTTGCGTAATC
TGTAAGCAAATACATGGTTCATGCACACAGTGTTGCAAGTGTTCTACTTACTACCATGCA
ATGTGTGCATCAAGGGCGGGGTATCGTATGGAGTTGCACAGCTTGGTGAAAAATGGCAGA
CAGATAACAAAGATGGTTTCATATTGTGCTTATCACAGGGCTCCAAATCCTGATACTGTT
TTAATCATTCAAACTCCCCTAGGGGTTTTCTCTACCAAAAGCCTCATCCAAAATAAGAAG
AAGTCCGGTTCAAGGTTAATTTCATCCAACAGGATAGAACTTCAACAGATTCCTACAGTG
GAAACTGACGAGTTTGAGCCCTTCTCTGCTGCAAGGTGCCGGATTTTTAGAAGATCAAAA
TCAAACACTAAGAGGACAGTAGAAGAAGCCATTGCCCACCAAGTCAAGGGCCCCTTCCAT
CATTCTTTGAGTGCAATAGAAAGCTTGAATATATTCAGAGAAGTGGAAGAGCCTAAAAAT
TTTTCTACTTTCAGGGAACGGCTTTACCACTTGCAGAGGACTGAAAATGATAGGGTTTGC
TTTGGTAGATCTGGAATACATGGCTGGGGCCTCTTTGCACGACAAGCTATTCAAGAAGGA
GATATGGTTCTTGAATATCGAGGTGAACAAGTGAGGCGCAGTATTGCAGATATGAGGGAG
GTGCGCTACCGATTAGAAGGAAAAGACTGCTATCTCTTTAAGATCAGTGAAGAAGTGGTA
GTCGATGCTACAGATAAAGGAAACATTGCCCGCCTAATCAACCACTCGTGTGCCCCCAAC
TGCTATGCAAGGATCATGAGTGTGGGTGACGATGAGAGCAGGATTGTTCTTATTGCTAAG
ACCAATGTCGCTGCTGGCGATGAGCTAACGTATGACTACTTGTTTGATCCCGATGAGCCG
GACGAATGCAAGGTCCCCTGTTTGTGTAAAGCTCCAAACTGCAGAAAATTCATGAATTAG

Peptide Sequence

PEP ID

VIT_16s0098g00350.t01
PEP Infomation

pep chromosome:12X:16:20769708:20783973:-1 gene:VIT_16s0098g00350 transcript:VIT_16s0098g00350.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone-lysine N-methyltransferase [Source:UniProtKB/TrEMBL;Acc:F6H7C9]
Sequence

MIIKRNLKSKMPSMKRCRLGHSAADDDESPAAKKKRKMNGYFPLNLLGDVAAGIIPLSGY
GLQRIFGGHVGDDGDGVGAMNRAAQVHRPPLVRTSRGRVQVLPSRFNDSILDNWRKESKP
NAREIILDEDFEPEKEKPCSKTPKQSVKKGLNEGKFGHQCRKFSALCQEDGDEMGYVGFK
NVGTKKKYSSSRSSLTSLHEQLAEVERYPTDEVEEKFGLGRVDRESKGGSRLEEFISGDI
VWAKSGKKDPFWPAIVIDPTSQAPGQVLSSCIAGAVCVMFFGYSGNGSRDYGWIKRGMIF
SFIDNVERFQGQSDLNDCKPSDFRTAIEEAFLAENGFIEKLTEDINVASGKPNYLESTRG
IQEATGSNQDQECDSQDQASGDVFRKKDTWSCDGCGLRIPLKSTKKMKVLTPKGRFLCKT
CDRLLKSKQYCGICKKMQNQSDSGTWVRCDGCKVWVHAECGKISSKLFKNLGATDYYCPA
CKAKFNFELSDSERWQPKVKCNKNNSQLVLPNKVTVTCSGVEGIYFPSIHLVVCKCGSCG
MEKQSLTEWERHTGSKGKNWKTSVRVKGSMLSLEQWMLQVAEYHDNSFLAVNPPKRPSIR
ERRQKLLTFLQDTLEAAVTDESTDCIPTSVVTEKYEPVHARWTTERCAVCRWVEDWDYNK
IIICNRCQIAVHQECYGARNVRDFTSWVCRACETPDVERECCLCPVKGGALKPTDIETLW
VHVTCAWFQPEVSFSSDEKMEPAVGILSIPSNSFIKICVICKQIHGSCTQCCKCSTYYHA
MCASRAGYRMELHSLVKNGRQITKMVSYCAYHRAPNPDTVLIIQTPLGVFSTKSLIQNKK
KSGSRLISSNRIELQQIPTVETDEFEPFSAARCRIFRRSKSNTKRTVEEAIAHQVKGPFH
HSLSAIESLNIFREVEEPKNFSTFRERLYHLQRTENDRVCFGRSGIHGWGLFARQAIQEG
DMVLEYRGEQVRRSIADMREVRYRLEGKDCYLFKISEEVVVDATDKGNIARLINHSCAPN
CYARIMSVGDDESRIVLIAKTNVAAGDELTYDYLFDPDEPDECKVPCLCKAPNCRKFMN

Transcript Sequence

Transcript ID

VIT_16s0098g00350.t01
Transcript Infomation

cdna chromosome:12X:16:20769708:20783973:-1 gene:VIT_16s0098g00350 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone-lysine N-methyltransferase [Source:UniProtKB/TrEMBL;Acc:F6H7C9]
Sequence

AGGAATTGTGGAGAAATTTTCTATGGTCTTGGAGGGTTGGTTTGGGATTAGGGTTTTGGG
AAATTTGGGGTTTTGTTGGGAATTCGAATAGGATTTGGTTGGGGGGGGAACAATGATAAT
TAAGCGCAATTTGAAATCGAAAATGCCGAGTATGAAACGATGCAGACTCGGCCACTCGGC
GGCGGACGACGATGAGTCGCCGGCGGCGAAGAAGAAGCGTAAGATGAATGGTTATTTCCC
TCTGAATCTGCTCGGGGACGTCGCAGCGGGGATAATTCCGTTGAGCGGGTACGGCCTTCA
ACGGATATTCGGCGGTCACGTCGGAGATGACGGAGACGGCGTGGGAGCTATGAATCGTGC
GGCTCAGGTTCACCGGCCGCCGCTGGTGAGGACGTCAAGGGGACGAGTTCAGGTACTCCC
ATCTCGATTCAACGATTCAATTCTTGATAATTGGAGGAAAGAGAGCAAACCCAATGCTCG
TGAGATCATTCTAGATGAGGATTTCGAACCGGAAAAAGAAAAACCTTGTTCCAAAACCCC
GAAACAGAGTGTGAAAAAGGGGCTAAATGAGGGTAAATTTGGACACCAATGTAGAAAATT
CTCGGCATTGTGTCAAGAAGACGGAGATGAAATGGGGTATGTTGGGTTTAAGAATGTTGG
TACCAAGAAGAAGTATTCCAGTTCGCGCAGTTCACTTACTTCTCTGCATGAGCAATTGGC
AGAGGTCGAGCGGTATCCAACTGACGAAGTTGAGGAAAAGTTCGGTTTGGGAAGAGTCGA
TAGAGAGAGTAAAGGTGGTAGTAGGTTAGAGGAGTTTATTTCAGGTGATATAGTATGGGC
GAAGTCGGGGAAGAAGGATCCTTTCTGGCCTGCCATTGTCATTGATCCAACCTCGCAAGC
ACCCGGGCAAGTTTTGAGTTCATGTATTGCTGGCGCAGTTTGTGTAATGTTCTTTGGCTA
TTCTGGAAATGGGAGTCGAGATTATGGGTGGATTAAGCGTGGGATGATATTTTCATTCAT
AGATAATGTAGAAAGGTTCCAGGGACAAAGTGACTTGAATGATTGTAAGCCCAGTGATTT
TCGGACAGCTATAGAGGAGGCATTTCTTGCAGAAAATGGTTTTATTGAGAAGCTGACAGA
GGATATAAATGTGGCTTCTGGGAAACCCAATTATCTTGAATCCACTAGAGGGATCCAAGA
GGCTACTGGTTCGAATCAGGATCAAGAATGCGATTCTCAGGACCAGGCAAGTGGTGATGT
ATTTAGGAAGAAGGACACATGGTCTTGTGATGGCTGCGGCTTGAGAATTCCTCTTAAAAG
TACAAAGAAAATGAAAGTTTTGACTCCTAAAGGCCGTTTTCTATGTAAAACCTGTGATAG
GTTGTTAAAATCCAAACAGTATTGTGGCATATGCAAGAAGATGCAGAATCAATCAGACAG
TGGGACTTGGGTGCGCTGTGATGGTTGCAAAGTTTGGGTGCATGCAGAGTGTGGTAAAAT
TTCCAGTAAACTTTTCAAGAATCTTGGGGCTACTGATTATTACTGCCCTGCTTGCAAAGC
AAAGTTTAATTTTGAATTGTCAGATTCAGAAAGATGGCAGCCTAAAGTCAAATGCAACAA
AAACAACAGTCAATTAGTGCTGCCTAACAAGGTTACAGTTACTTGCTCGGGTGTGGAAGG
CATATATTTCCCAAGCATTCATTTAGTTGTGTGCAAGTGTGGGTCATGCGGGATGGAAAA
GCAATCACTTACTGAATGGGAGCGTCACACAGGTTCCAAAGGGAAAAATTGGAAGACAAG
TGTTAGGGTAAAAGGTTCCATGTTGTCATTGGAGCAATGGATGCTGCAGGTTGCAGAGTA
TCATGATAATAGTTTTCTTGCTGTTAACCCTCCTAAACGACCTTCTATAAGAGAACGAAG
ACAGAAGTTGCTTACTTTTTTGCAAGATACTTTAGAAGCTGCTGTCACCGATGAATCAAC
TGATTGCATTCCTACTTCCGTTGTGACAGAAAAATATGAGCCTGTTCATGCTAGGTGGAC
AACAGAACGATGTGCTGTATGTAGATGGGTTGAAGATTGGGACTACAACAAAATTATTAT
ATGCAACAGATGTCAAATAGCCGTCCATCAAGAGTGTTATGGGGCAAGAAATGTTCGGGA
TTTCACTTCATGGGTTTGCAGAGCATGTGAAACACCTGATGTTGAGCGGGAGTGTTGCCT
TTGTCCTGTAAAAGGTGGTGCTCTAAAGCCAACTGATATTGAGACATTATGGGTTCATGT
CACTTGTGCTTGGTTTCAACCTGAAGTTTCTTTCTCAAGTGATGAAAAGATGGAGCCTGC
TGTTGGCATCTTGAGCATTCCATCAAATTCTTTTATAAAGATTTGCGTAATCTGTAAGCA
AATACATGGTTCATGCACACAGTGTTGCAAGTGTTCTACTTACTACCATGCAATGTGTGC
ATCAAGGGCGGGGTATCGTATGGAGTTGCACAGCTTGGTGAAAAATGGCAGACAGATAAC
AAAGATGGTTTCATATTGTGCTTATCACAGGGCTCCAAATCCTGATACTGTTTTAATCAT
TCAAACTCCCCTAGGGGTTTTCTCTACCAAAAGCCTCATCCAAAATAAGAAGAAGTCCGG
TTCAAGGTTAATTTCATCCAACAGGATAGAACTTCAACAGATTCCTACAGTGGAAACTGA
CGAGTTTGAGCCCTTCTCTGCTGCAAGGTGCCGGATTTTTAGAAGATCAAAATCAAACAC
TAAGAGGACAGTAGAAGAAGCCATTGCCCACCAAGTCAAGGGCCCCTTCCATCATTCTTT
GAGTGCAATAGAAAGCTTGAATATATTCAGAGAAGTGGAAGAGCCTAAAAATTTTTCTAC
TTTCAGGGAACGGCTTTACCACTTGCAGAGGACTGAAAATGATAGGGTTTGCTTTGGTAG
ATCTGGAATACATGGCTGGGGCCTCTTTGCACGACAAGCTATTCAAGAAGGAGATATGGT
TCTTGAATATCGAGGTGAACAAGTGAGGCGCAGTATTGCAGATATGAGGGAGGTGCGCTA
CCGATTAGAAGGAAAAGACTGCTATCTCTTTAAGATCAGTGAAGAAGTGGTAGTCGATGC
TACAGATAAAGGAAACATTGCCCGCCTAATCAACCACTCGTGTGCCCCCAACTGCTATGC
AAGGATCATGAGTGTGGGTGACGATGAGAGCAGGATTGTTCTTATTGCTAAGACCAATGT
CGCTGCTGGCGATGAGCTAACGTATGACTACTTGTTTGATCCCGATGAGCCGGACGAATG
CAAGGTCCCCTGTTTGTGTAAAGCTCCAAACTGCAGAAAATTCATGAATTAGGTATTTAC
ATATACACACACAACACTCCATTGTTTCTCCGCAAGGAACGCTAACCCCCTATCATCGCC
TTCTCCCAAGGAGTTAATACACAGTCGTCTTGCTAATTCTGCTTTCTTCTTTCTTCTTTC
CTTTTCCTCTCTACAATGAGCCT