Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0050g02520.t01
CDS Infomation

cds chromosome:12X:16:19488875:19492368:1 gene:VIT_16s0050g02520 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAGTTGTGACTGTTTCTAGCTCAGCTTCAGCTTCTCGAACCCCATTTGGATTGAAC
GCAAAATTTTCAAATCATCAAACCCCTTTGAGGAGGCCCCTAGTTTTGGCATTCAAAGCA
GATAAAGCCAAGAACATAGCTCTGGTTACTCCCCATGAGCCAATCCCTTTACCTATAGAG
ACTTCTAAAGATCATAAGAAGAGACTTCGTAGGGCTTCCAAGCCTTCAAAGAGAGTAAAA
GCGGTCAGTACAGATGAAGTATCGCCATGTAGTGTAGAATTGGATTACAATGAAGCTGCT
GCCAAACTTGAAAATATATACAAGCTTAGCCCTGCAACTGATGTTTCAGAGGCAGAAGAT
TTAGAACGTGTCGTTAGGAGAGGGCGACAGAGGAGGAAGAGAGTTACTTTGGCTGATGAC
AAGGCAGAGAAGGAGGTTAGTGATAATGTAGTGAGGATCCATAATAAGAAACCGAAACGA
TTGAGTCTTGAGAAGAGGATTGCTTTGAGTAAGATGAAGCAAGAAAAAGCAGTTGCTTCA
ATTCAAAAGAAAAGGGACAGTAAAAATGAAGATGAAAATATTGATGTGCTTGTTAGGGAG
TACTCGGCTTCTACTGACTTGGTCAGTTTGGACTGGAAGAAAATGAAGATACCACCCGTG
CTTCCTCCCTCAGAGCATGCATGGCTATTCAAGCTAATGCAGCCCATGAAGGGACTCCTT
GAAGTGAAAGACAACTTACAAAAGGATTTGGGGAGAGAACCAACCGATGGGGAATTAGCA
GAGGCCATGAGTATGAGTGCAGTTCAAGTAAGAAGACACATGGAAGTTGGTCAAGCAGCA
AGAAACAAGCTGATTAAGCACAATCTTCGACTGGTTTTGTTTGTAATCAACAAGTACTTT
CAAGAGTTTGCCAATGGCCCAAAGTTTCAAGACCTGTGTCAAGCAGGAGTGAAGGGCCTT
ATCACAGCCATCGATCGCTTTGAACCAAAAAGGAGTTTCCGGCTCTCAACCTATGGTCTG
TTTTGGATTAGGCATGCCATCATGCGCTCCATGACACTCTCAAGCTTTACACGCGTCTCC
TTTGGCCTTGAGTCGGTTAGGGTAGAAATCCAAAGAGCAAAACTAGAGTTGTTGTTCAAG
CTCCAAAGATTACCAACAGAGGAAGAGATAATAGAAAAGGTTGGAATCTCCCCTGAGAGG
TACCATGAAGTGATGAGGGCCTCAAAATCCGTCCTCTCTCTCCATGCAAGGCATGCAACC
ACACAAGAAGAGTACATCAATGGAATTACAGATGTTGAAGGTGTTGGGGGTGATAGGGGG
CGGCAACTTGCTCTTCTCAGACTTGCTCTTGATGATGTGCTCGATTCTCTGAAGCCAAAG
GAGAGCTTGGTGATGAGACAGAGATATGGTCTTGATGGTAAGGGTGATCGGACACTGGGG
GAGATTGCAGGAAACCTAAGCATCTCAAGAGAAATGGTTCGAAAGCATGAGGTGAAGGCT
CTCATGAAGCTCAAGCATCCAGCACGAGTGGATTATCTTCGCCAATACATATTCTAA

Peptide Sequence

PEP ID

VIT_16s0050g02520.t01
PEP Infomation

pep chromosome:12X:16:19488875:19492368:1 gene:VIT_16s0050g02520 transcript:VIT_16s0050g02520.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIE
TSKDHKKRLRRASKPSKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAED
LERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVAS
IQKKRDSKNEDENIDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGLL
EVKDNLQKDLGREPTDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKYF
QEFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTRVS
FGLESVRVEIQRAKLELLFKLQRLPTEEEIIEKVGISPERYHEVMRASKSVLSLHARHAT
TQEEYINGITDVEGVGGDRGRQLALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTLG
EIAGNLSISREMVRKHEVKALMKLKHPARVDYLRQYIF

Transcript Sequence

Transcript ID

VIT_16s0050g02520.t01
Transcript Infomation

cdna chromosome:12X:16:19488875:19492368:1 gene:VIT_16s0050g02520 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACGCCTTAATTTGAGGATTTATGATTTTGGTATTTAAACTCCGGTACTTTTAACAGCAGA
GATTCTCTCCAAATCGCTGTGAATTCTGTGTTAACTCGGTGACGCGGTTCTGAGTTCCTT
TTCTTTTGCTTCTTTAGAGGAATTGTACAGTTTGGAAAGCTTTCATTCATCACTTAGAAA
TTTTGTTGTAAATAACTTGGCATGGGAGTTGTGACTGTTTCTAGCTCAGCTTCAGCTTCT
CGAACCCCATTTGGATTGAACGCAAAATTTTCAAATCATCAAACCCCTTTGAGGAGGCCC
CTAGTTTTGGCATTCAAAGCAGATAAAGCCAAGAACATAGCTCTGGTTACTCCCCATGAG
CCAATCCCTTTACCTATAGAGACTTCTAAAGATCATAAGAAGAGACTTCGTAGGGCTTCC
AAGCCTTCAAAGAGAGTAAAAGCGGTCAGTACAGATGAAGTATCGCCATGTAGTGTAGAA
TTGGATTACAATGAAGCTGCTGCCAAACTTGAAAATATATACAAGCTTAGCCCTGCAACT
GATGTTTCAGAGGCAGAAGATTTAGAACGTGTCGTTAGGAGAGGGCGACAGAGGAGGAAG
AGAGTTACTTTGGCTGATGACAAGGCAGAGAAGGAGGTTAGTGATAATGTAGTGAGGATC
CATAATAAGAAACCGAAACGATTGAGTCTTGAGAAGAGGATTGCTTTGAGTAAGATGAAG
CAAGAAAAAGCAGTTGCTTCAATTCAAAAGAAAAGGGACAGTAAAAATGAAGATGAAAAT
ATTGATGTGCTTGTTAGGGAGTACTCGGCTTCTACTGACTTGGTCAGTTTGGACTGGAAG
AAAATGAAGATACCACCCGTGCTTCCTCCCTCAGAGCATGCATGGCTATTCAAGCTAATG
CAGCCCATGAAGGGACTCCTTGAAGTGAAAGACAACTTACAAAAGGATTTGGGGAGAGAA
CCAACCGATGGGGAATTAGCAGAGGCCATGAGTATGAGTGCAGTTCAAGTAAGAAGACAC
ATGGAAGTTGGTCAAGCAGCAAGAAACAAGCTGATTAAGCACAATCTTCGACTGGTTTTG
TTTGTAATCAACAAGTACTTTCAAGAGTTTGCCAATGGCCCAAAGTTTCAAGACCTGTGT
CAAGCAGGAGTGAAGGGCCTTATCACAGCCATCGATCGCTTTGAACCAAAAAGGAGTTTC
CGGCTCTCAACCTATGGTCTGTTTTGGATTAGGCATGCCATCATGCGCTCCATGACACTC
TCAAGCTTTACACGCGTCTCCTTTGGCCTTGAGTCGGTTAGGGTAGAAATCCAAAGAGCA
AAACTAGAGTTGTTGTTCAAGCTCCAAAGATTACCAACAGAGGAAGAGATAATAGAAAAG
GTTGGAATCTCCCCTGAGAGGTACCATGAAGTGATGAGGGCCTCAAAATCCGTCCTCTCT
CTCCATGCAAGGCATGCAACCACACAAGAAGAGTACATCAATGGAATTACAGATGTTGAA
GGTGTTGGGGGTGATAGGGGGCGGCAACTTGCTCTTCTCAGACTTGCTCTTGATGATGTG
CTCGATTCTCTGAAGCCAAAGGAGAGCTTGGTGATGAGACAGAGATATGGTCTTGATGGT
AAGGGTGATCGGACACTGGGGGAGATTGCAGGAAACCTAAGCATCTCAAGAGAAATGGTT
CGAAAGCATGAGGTGAAGGCTCTCATGAAGCTCAAGCATCCAGCACGAGTGGATTATCTT
CGCCAATACATATTCTAAAATAATCGAACTTCATCTGCCTTGCTTATCAATACGTCTTCA
TATACTCCTTTGCTTCCTCCCAATCATCTCTATTCATCAGCCATGGTTGTATACTAATTG
ATCTGCACCATAGTCTTTTAACTACCAGAATATACAAGTTTCATAAATTCATACAGTGTA
ATCTTTATTTGGAGAATCGGAGATTGCAAATCTCCAAGTATATATCACATCTTAAATCTT
ATTTTCTCAGTATTAAGGAGA