Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0050g02490.t01
CDS Infomation

cds chromosome:12X:16:19456022:19462863:1 gene:VIT_16s0050g02490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAAATCTTCAGAGTTGTCAGTCACAAAAGAACCTTGCTAGGGTTTAAGAGAAGCTTC
AGTACAGAACCAGAACTGAAGGACTTTTTAAACTACTTGGACAATCTCAAAAACTATGAG
AAATGTGGTGTCCCCAAAGATGCAGGCACAGACTCAAGCCATGGCTTTGATCTGGGCCGC
ATGAACCGGTTGATGGATCGGCTTGGTAACCCTGAGACAGGGTTTAAGGCTGTTCACATT
GCTGGGACCAAAGGAAAAGGGTCAACTGCTGCATTTCTTGCCAATATTTTACGGACAGAA
GGTTATGCTGTTGGTTGTTATACTAGCCCACATGTTCGGACTATCAGAGAGCGTATATCA
CTGGGAAAATTAGGTGAACCGGTCTCAGCAAAGGCATTGAATTGTTTGTTCCATAGGATT
AAGCCAATCCTTGACGAGGCAGTGGCACTTGAAAATGGGCGTTTGAGTCATTTTGAGATT
CTTACTGCAATGGCGTTCAAGCTTTTTGCTCAAGAGAATGTTGATGTTGCAGTTATTGAG
GCTGGACTGGGGGGAGCACGGGATGCGACAAACATAATTTCTAGTTCTGGACTAGCTGCA
GCAGTTATAACAACAATAGGGGAGGAACATTTGGCTGCACTAGGGGGTTCCCTGGAAAGC
ATTGCAATGGCAAAGTCAGGAATAATCAAACAAGGTTGCCCATTGGTGCTGGGGGGCCCA
TTCCTTCCACATATTGAACACATTTTTCTTGACAAAGCATCCTCAATGTGTTCTCCTGTA
GTATCAGCATCTGGACCTGGAAATAGAAGTGCTGTAAAAGGAGTTAGCAAATCCAATGGA
AAACCTTTCCAATCTTGTGATATAGTGATAGAAGTTGAGAGGGACTTTAAATTGTTCATC
GAGTTATTTGACGTGAAACTACAGATGCTTGGAATTCACCAACTTCAAAATGCTGCAACT
GCCACTTGTGTGGCACTGTGCTTGCGTGATAAAGGATGGAGAATTTCAGATGAATCCATT
CATGCTGGTCTAGAGCATGCCTATTTGCTTGGGAGAAGTCAGTTTCTAACATCTACAGAA
GCTGAGACATTAGGGCTACCTGGAGCAACCATAATGCTTGATGGAGCTCACACCAAAGAA
TCTGCTAAAGCTTTGGTGGACACTATTCAAATGACATTTCCAGAGGCACGATTGGCTCTT
ATTGTTGCAATGGCAAGTGACAAAGACCATATGGCTTTTGCAAGAGAATTTCTTTCAGGT
GGACAATTAGAGGCTGTCTTTCTAACAGAGGTCAACATTGCTGGAGCAAAATCTCGAACA
ACTTCTGCTTCCATGTTAAGAGATTGTTGGATCCAAGCTTCCAAGGAACTGGGCATCAAT
ACTCTTCATGATGGAATGGAAGAATACCAGAAGTTGTTTGAGAATCAATCATTCTGCTCT
GCAGGGGAATCAAAACATAAAACCATACTGGCTGCTGAGAATTCATTACTAGTTTCCTTG
AGGGTTGGAAATCAGATTCTGAGAGCAAGGACCAGAGACCAAACTAGTATAATTGTAATC
ACAGGATCTCTGCATATTGTTTCGACGGTATTATCCTCTCTCCTTGGTTAA

Peptide Sequence

PEP ID

VIT_16s0050g02490.t01
PEP Infomation

pep chromosome:12X:16:19456022:19462863:1 gene:VIT_16s0050g02490 transcript:VIT_16s0050g02490.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKIFRVVSHKRTLLGFKRSFSTEPELKDFLNYLDNLKNYEKCGVPKDAGTDSSHGFDLGR
MNRLMDRLGNPETGFKAVHIAGTKGKGSTAAFLANILRTEGYAVGCYTSPHVRTIRERIS
LGKLGEPVSAKALNCLFHRIKPILDEAVALENGRLSHFEILTAMAFKLFAQENVDVAVIE
AGLGGARDATNIISSSGLAAAVITTIGEEHLAALGGSLESIAMAKSGIIKQGCPLVLGGP
FLPHIEHIFLDKASSMCSPVVSASGPGNRSAVKGVSKSNGKPFQSCDIVIEVERDFKLFI
ELFDVKLQMLGIHQLQNAATATCVALCLRDKGWRISDESIHAGLEHAYLLGRSQFLTSTE
AETLGLPGATIMLDGAHTKESAKALVDTIQMTFPEARLALIVAMASDKDHMAFAREFLSG
GQLEAVFLTEVNIAGAKSRTTSASMLRDCWIQASKELGINTLHDGMEEYQKLFENQSFCS
AGESKHKTILAAENSLLVSLRVGNQILRARTRDQTSIIVITGSLHIVSTVLSSLLG

Transcript Sequence

Transcript ID

VIT_16s0050g02490.t01
Transcript Infomation

cdna chromosome:12X:16:19456022:19462863:1 gene:VIT_16s0050g02490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGACACATTAGCGGAAATTAGGGAAGACCACTATAGCCTACAAAGCCGCATGGTCAAGGA
CATAGATAAATGTCACTGAAATTCAGAGCCTGTGATGGAATTCCAGAGTAGACATGGGTA
GCTACTAATTACAATCAGATTGTGTTACAAATTAGATTATTCATTCCTCTCAAATGAAAA
TCTTCAGAGTTGTCAGTCACAAAAGAACCTTGCTAGGGTTTAAGAGAAGCTTCAGTACAG
AACCAGAACTGAAGGACTTTTTAAACTACTTGGACAATCTCAAAAACTATGAGAAATGTG
GTGTCCCCAAAGATGCAGGCACAGACTCAAGCCATGGCTTTGATCTGGGCCGCATGAACC
GGTTGATGGATCGGCTTGGTAACCCTGAGACAGGGTTTAAGGCTGTTCACATTGCTGGGA
CCAAAGGAAAAGGGTCAACTGCTGCATTTCTTGCCAATATTTTACGGACAGAAGGTTATG
CTGTTGGTTGTTATACTAGCCCACATGTTCGGACTATCAGAGAGCGTATATCACTGGGAA
AATTAGGTGAACCGGTCTCAGCAAAGGCATTGAATTGTTTGTTCCATAGGATTAAGCCAA
TCCTTGACGAGGCAGTGGCACTTGAAAATGGGCGTTTGAGTCATTTTGAGATTCTTACTG
CAATGGCGTTCAAGCTTTTTGCTCAAGAGAATGTTGATGTTGCAGTTATTGAGGCTGGAC
TGGGGGGAGCACGGGATGCGACAAACATAATTTCTAGTTCTGGACTAGCTGCAGCAGTTA
TAACAACAATAGGGGAGGAACATTTGGCTGCACTAGGGGGTTCCCTGGAAAGCATTGCAA
TGGCAAAGTCAGGAATAATCAAACAAGGTTGCCCATTGGTGCTGGGGGGCCCATTCCTTC
CACATATTGAACACATTTTTCTTGACAAAGCATCCTCAATGTGTTCTCCTGTAGTATCAG
CATCTGGACCTGGAAATAGAAGTGCTGTAAAAGGAGTTAGCAAATCCAATGGAAAACCTT
TCCAATCTTGTGATATAGTGATAGAAGTTGAGAGGGACTTTAAATTGTTCATCGAGTTAT
TTGACGTGAAACTACAGATGCTTGGAATTCACCAACTTCAAAATGCTGCAACTGCCACTT
GTGTGGCACTGTGCTTGCGTGATAAAGGATGGAGAATTTCAGATGAATCCATTCATGCTG
GTCTAGAGCATGCCTATTTGCTTGGGAGAAGTCAGTTTCTAACATCTACAGAAGCTGAGA
CATTAGGGCTACCTGGAGCAACCATAATGCTTGATGGAGCTCACACCAAAGAATCTGCTA
AAGCTTTGGTGGACACTATTCAAATGACATTTCCAGAGGCACGATTGGCTCTTATTGTTG
CAATGGCAAGTGACAAAGACCATATGGCTTTTGCAAGAGAATTTCTTTCAGGTGGACAAT
TAGAGGCTGTCTTTCTAACAGAGGTCAACATTGCTGGAGCAAAATCTCGAACAACTTCTG
CTTCCATGTTAAGAGATTGTTGGATCCAAGCTTCCAAGGAACTGGGCATCAATACTCTTC
ATGATGGAATGGAAGAATACCAGAAGTTGTTTGAGAATCAATCATTCTGCTCTGCAGGGG
AATCAAAACATAAAACCATACTGGCTGCTGAGAATTCATTACTAGTTTCCTTGAGGGTTG
GAAATCAGATTCTGAGAGCAAGGACCAGAGACCAAACTAGTATAATTGTAATCACAGGAT
CTCTGCATATTGTTTCGACGGTATTATCCTCTCTCCTTGGTTAAGTTGCTTCCTTCTTGC
TGCGATGATTTCTATCCATCTTCTCCTATTCAATCTGATCCATTGGCAACATGGAATATT
AGATTTTGTGCTTTACACATAAGGGTCCTAGTCTGATCATCTTTGATCATTCGTGGGGTG
CATGAATTTATTTGTATCCATATCTTCATGTTGTGCTTCTCTTTTGAGACTGGAACAACA
TATATAGATTTTGCCTTTTGGTTTCTTCTGAGAAAAACTAGTACATGTTCTTACAGAATC
CCCACAGCGATGGAAATAATACTTTTGAAATGATATGAACATCACAATTTCATTGGATTG
AA