Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0050g02420.t01
CDS Infomation

cds chromosome:12X:16:19358639:19364934:1 gene:VIT_16s0050g02420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCAGAAATCAGAGGCCCACTTCGCGAAGATGGAACGGCTCAGATCGCACCGTCGT
GTCCAAATCGAAGATTCCAAACCCACTCGCTACGACGACGACGACGACGAAGAAGAACCA
AGTTCACGCGGTTCAATCAAACTGAGGCCGTCGGAGAAGAACGTAACTGAAGATCAAGAG
CCGTTCATGGGCGTCAAGGTCCGGAGAAGAGCTTCGCTGCATCGCGATTACAAGGGGGAT
TATCTCGATGTGCCTTCTCAGCCATTCCTCATGAAGCTTTTAGGGAAACAAGGTGACAGG
CAAGTTCTCTTTGCAGATAAAGCTTTGAAGTTCACTGGTTCAGGAAAGATGAAACGGCGT
ACCCTCTTGATCACTGACTTCGCCATTTACATCATTGACTCAGAGACCGATATGCTTAAA
CGGAGGATATCACTTGCAGCTGTTGAAAAAATTTGTTTGAGTGAACTAAGTGATAACTTC
TTTGCAATTATTATTCCAACTGAGTACGACTTGCTGATGGCCAGTACTCGAAAGACCGAG
ATTGTTACTGTGTTGGTTGATGCTACCAAGAATATGTCTGACTATGAGCTTGAGGTGGTT
TTCTCCAACAGATTTGAATATAATGCTGCCTCTGACCTGGTGAAGGAAGTTCAATTCGAA
GAAGTTGAAGGGGGTGTCAAAACAAGAATTTTGAGGAAGTGA

Peptide Sequence

PEP ID

VIT_16s0050g02420.t01
PEP Infomation

pep chromosome:12X:16:19358639:19364934:1 gene:VIT_16s0050g02420 transcript:VIT_16s0050g02420.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAQKSEAHFAKMERLRSHRRVQIEDSKPTRYDDDDDEEEPSSRGSIKLRPSEKNVTEDQE
PFMGVKVRRRASLHRDYKGDYLDVPSQPFLMKLLGKQGDRQVLFADKALKFTGSGKMKRR
TLLITDFAIYIIDSETDMLKRRISLAAVEKICLSELSDNFFAIIIPTEYDLLMASTRKTE
IVTVLVDATKNMSDYELEVVFSNRFEYNAASDLVKEVQFEEVEGGVKTRILRK

Transcript Sequence

Transcript ID

VIT_16s0050g02420.t01
Transcript Infomation

cdna chromosome:12X:16:19358639:19364934:1 gene:VIT_16s0050g02420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TATCGACTGCTCTTGGCCTTGACTTCAAATCCTCTGAAATGGCTCAGAAATCAGAGGCCC
ACTTCGCGAAGATGGAACGGCTCAGATCGCACCGTCGTGTCCAAATCGAAGATTCCAAAC
CCACTCGCTACGACGACGACGACGACGAAGAAGAACCAAGTTCACGCGGTTCAATCAAAC
TGAGGCCGTCGGAGAAGAACGTAACTGAAGATCAAGAGCCGTTCATGGGCGTCAAGGTCC
GGAGAAGAGCTTCGCTGCATCGCGATTACAAGGGGGATTATCTCGATGTGCCTTCTCAGC
CATTCCTCATGAAGCTTTTAGGGAAACAAGGTGACAGGCAAGTTCTCTTTGCAGATAAAG
CTTTGAAGTTCACTGGTTCAGGAAAGATGAAACGGCGTACCCTCTTGATCACTGACTTCG
CCATTTACATCATTGACTCAGAGACCGATATGCTTAAACGGAGGATATCACTTGCAGCTG
TTGAAAAAATTTGTTTGAGTGAACTAAGTGATAACTTCTTTGCAATTATTATTCCAACTG
AGTACGACTTGCTGATGGCCAGTACTCGAAAGACCGAGATTGTTACTGTGTTGGTTGATG
CTACCAAGAATATGTCTGACTATGAGCTTGAGGTGGTTTTCTCCAACAGATTTGAATATA
ATGCTGCCTCTGACCTGGTGAAGGAAGTTCAATTCGAAGAAGTTGAAGGGGGTGTCAAAA
CAAGAATTTTGAGGAAGTGAGTTGCAGCTTTTCATTGTGATCATATGATTTCTACACACT
TGCGGGGATTGGCACAATACTGATTATTTCATCTCTGCGATCAGGAGGTTCTATTCAGTG
TACAACCCAACCCCACCTGAAATGTAGTTTATTGTTTCATTTATATTATTATTTTTTTGT
GTGTAATTTTTCTACTCTGAACCAGTTTCATCTGGAAGCAGAA