Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0050g02380.t01
CDS Infomation

cds chromosome:12X:16:19309225:19310778:1 gene:VIT_16s0050g02380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTGACGGTCTCGCTGTGCTACATGCTCTTGATTCAGCTCGAACACAATGGTACCAC
ATCACCGCCATCGTCATCGCCGGCATGGGCTTCTTCACTGATGCCTATGATCTCTTCTGC
ATCTCCACCGTCTCCAAACTCCTCGGCCGCCTTTACTACTATGACCCCACTAAAGATAAG
CCTGGGAAGCTCCCCCACGGTGTTAACAACTTTGTGATTGGGGTTGCCCTAGTAGGAACC
CTATCAGGCCAACTAGTATTTGGTTGGCTTGGTGACAAACTTGGCCGGAAAAAAGTTTAT
GGCATGACTCTCATTCTTATGTCCATTTGTGCCATCTGCTCTGGCCTATCCTTCGGCTTC
AGCAATAAATCTGTAATCACTACACTTTGTTTCTTCAGATTCTGGCTAGGGTTTGGAATT
GGAGGTGACTATCCTCTCTCCGCAACGATCATGTCGGAGTATGCAAATAAAAAAACTCGT
GGGGCTTTTATTGCAGCCGTGTTTGCTATGCAGGGCGTGGGGATCGTTTTTGCAGGGCTG
GTTTCCATGATTCTCTCGAAGCTCTTTCTCCTCAAGTATGAGACTGTGCCATTCAGTGAG
GAACCTATACTTTCTACACAACCTGAGGCAGATTATCTATGGCGGATCGTGCTGATGCTT
GGAGCCTTGCCTGCGCTTTTAACATACTATTGGAGAATGAAGATGCCGGAGACCGGTCGG
TACACTGCCCTTATTGAAGGAAATGCTAAACAAGCTGCTGCAGACATGGGTAGGGTTCTT
GAGATTGAAATCCAAGCTGAAGCAGATAAAGTGGCAGAGTTTAAGGCTGCTAACGAGTAC
TCATTATGGTCGAGAGAGTTCTTTGATCGCCATGGGCGTCACCTGATAGGCACAATGAGC
ACCTGGTTCTTGTTGGACATAGCCTTCTACAGCCAAAACCTAACTCAGAAGGATATTTTT
CCGGCGATGAACCTGGTAAAGAAAGATTATGAAGTCAGTGCTCTCCGGGAAATGTTCGAG
ACATCCAGGGCCATGTTTGTGGTGGCCTTGCTGGGGACTTTTCCGGGATACTGGTTCACA
GTTTTCTTCATTGACCGGATTGGCCGATTCATCATCCAGCTTGTGGGGTTCTTCATGATG
TCCTTATTCATGCTGATAATAGGAATCAAGTACGAATACCTCAGGGACGATAATAAATGG
CTGTTTGCAGTCCTATATGGGCTGACCTTCTTCTTCGCCAATTTCGGTCCAAACAGCACA
ACTTTTGTTCTTCCGGCCGAGCTGTTCCCGACCCGAGTGAGATCAACATGCCATGCAATG
AGCGCTGCGGCCGGGAAGGCTGGGGCTATGATCGGGGCATTTGTGGTGGCGACCTATACT
TTGGATGGTAAAGCTAATGAAATTAGGATAGCCATGATAACCATGGCCTGTACAAACATG
CTAGGGTTCTTCTGCACATTCTTGGTGACGGAGACCAAAGGCCGATCCCTCGAGGAAATA
TCAGGCGAGGATGGAGGTATTAATGAAACCGAGATGGCTAGCAGACCATCTTAA

Peptide Sequence

PEP ID

VIT_16s0050g02380.t01
PEP Infomation

pep chromosome:12X:16:19309225:19310778:1 gene:VIT_16s0050g02380 transcript:VIT_16s0050g02380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSDGLAVLHALDSARTQWYHITAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYYDPTKDK
PGKLPHGVNNFVIGVALVGTLSGQLVFGWLGDKLGRKKVYGMTLILMSICAICSGLSFGF
SNKSVITTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGVGIVFAGL
VSMILSKLFLLKYETVPFSEEPILSTQPEADYLWRIVLMLGALPALLTYYWRMKMPETGR
YTALIEGNAKQAAADMGRVLEIEIQAEADKVAEFKAANEYSLWSREFFDRHGRHLIGTMS
TWFLLDIAFYSQNLTQKDIFPAMNLVKKDYEVSALREMFETSRAMFVVALLGTFPGYWFT
VFFIDRIGRFIIQLVGFFMMSLFMLIIGIKYEYLRDDNKWLFAVLYGLTFFFANFGPNST
TFVLPAELFPTRVRSTCHAMSAAAGKAGAMIGAFVVATYTLDGKANEIRIAMITMACTNM
LGFFCTFLVTETKGRSLEEISGEDGGINETEMASRPS

Transcript Sequence

Transcript ID

VIT_16s0050g02380.t01
Transcript Infomation

cdna chromosome:12X:16:19309225:19310778:1 gene:VIT_16s0050g02380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTGACGGTCTCGCTGTGCTACATGCTCTTGATTCAGCTCGAACACAATGGTACCAC
ATCACCGCCATCGTCATCGCCGGCATGGGCTTCTTCACTGATGCCTATGATCTCTTCTGC
ATCTCCACCGTCTCCAAACTCCTCGGCCGCCTTTACTACTATGACCCCACTAAAGATAAG
CCTGGGAAGCTCCCCCACGGTGTTAACAACTTTGTGATTGGGGTTGCCCTAGTAGGAACC
CTATCAGGCCAACTAGTATTTGGTTGGCTTGGTGACAAACTTGGCCGGAAAAAAGTTTAT
GGCATGACTCTCATTCTTATGTCCATTTGTGCCATCTGCTCTGGCCTATCCTTCGGCTTC
AGCAATAAATCTGTAATCACTACACTTTGTTTCTTCAGATTCTGGCTAGGGTTTGGAATT
GGAGGTGACTATCCTCTCTCCGCAACGATCATGTCGGAGTATGCAAATAAAAAAACTCGT
GGGGCTTTTATTGCAGCCGTGTTTGCTATGCAGGGCGTGGGGATCGTTTTTGCAGGGCTG
GTTTCCATGATTCTCTCGAAGCTCTTTCTCCTCAAGTATGAGACTGTGCCATTCAGTGAG
GAACCTATACTTTCTACACAACCTGAGGCAGATTATCTATGGCGGATCGTGCTGATGCTT
GGAGCCTTGCCTGCGCTTTTAACATACTATTGGAGAATGAAGATGCCGGAGACCGGTCGG
TACACTGCCCTTATTGAAGGAAATGCTAAACAAGCTGCTGCAGACATGGGTAGGGTTCTT
GAGATTGAAATCCAAGCTGAAGCAGATAAAGTGGCAGAGTTTAAGGCTGCTAACGAGTAC
TCATTATGGTCGAGAGAGTTCTTTGATCGCCATGGGCGTCACCTGATAGGCACAATGAGC
ACCTGGTTCTTGTTGGACATAGCCTTCTACAGCCAAAACCTAACTCAGAAGGATATTTTT
CCGGCGATGAACCTGGTAAAGAAAGATTATGAAGTCAGTGCTCTCCGGGAAATGTTCGAG
ACATCCAGGGCCATGTTTGTGGTGGCCTTGCTGGGGACTTTTCCGGGATACTGGTTCACA
GTTTTCTTCATTGACCGGATTGGCCGATTCATCATCCAGCTTGTGGGGTTCTTCATGATG
TCCTTATTCATGCTGATAATAGGAATCAAGTACGAATACCTCAGGGACGATAATAAATGG
CTGTTTGCAGTCCTATATGGGCTGACCTTCTTCTTCGCCAATTTCGGTCCAAACAGCACA
ACTTTTGTTCTTCCGGCCGAGCTGTTCCCGACCCGAGTGAGATCAACATGCCATGCAATG
AGCGCTGCGGCCGGGAAGGCTGGGGCTATGATCGGGGCATTTGTGGTGGCGACCTATACT
TTGGATGGTAAAGCTAATGAAATTAGGATAGCCATGATAACCATGGCCTGTACAAACATG
CTAGGGTTCTTCTGCACATTCTTGGTGACGGAGACCAAAGGCCGATCCCTCGAGGAAATA
TCAGGCGAGGATGGAGGTATTAATGAAACCGAGATGGCTAGCAGACCATCTTAA