Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0050g02220.t01
CDS Infomation

cds chromosome:12X:16:19180654:19188753:-1 gene:VIT_16s0050g02220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAACCAAAGACAGGTTGGGCGTACAATTGGAGATGACATTCTTTCCTCAGCAGATTCG
TACCACTACTTCATTATTTTAAAGGAGAATGAAACAAAGATGGAGCTTCTGAAAGTGGAG
CCAAGACCCAAATCAGAACCAGAGAAACCATCACCTTCAGATGAGTATACAGATCTTTGC
ATTGCCTGGGAGTCATCTCGTGTATCCTGCTGGCTTGAAAGACAGCCTCCTGCAAGAATG
GCTAGAACCCCCCAATCCACACCTCTGCTCATCTCCCTCTCAGTCCTAGCCCTCCTCCAG
ACCTCTTATGCTGGTGGCATCGCCATCTACTGGGGCCAAAACGGCAATGAAGGGACCCTA
ACCCAAACCTGCAACACCGGAAAATACTCCTACGTTAACATAGCCTTCCTCAACAAGTTC
GGTAATGGCCAGACCCCTGAAATCAACCTTGCTGGCCATTGCAACCCTGCTTCCAATGGC
TGCACCTCCGTCAGTACCGGCATAAGAAACTGCCAAAATCGAGGCATTAAGGTCATGCTC
TCTATAGGTGGTGGGGTTGGAAGTTACTCTCTGTCCTCTTCCAATGATGCCCAAAACGTA
GCCAATTATCTGTGGAACAACTTCTTGGGAGGACAATCATCGTCTCGGCCATTAGGTGAT
GCAGTATTAGATGGCATAGACTTCGACATCGAGCTCGGTTCGACCCTGCACTGGGATGAC
CTTGCTCGAGCCTTATCAGGTTTCAGCAAGCGTGGAAGGAAGGTATACCTCACTGCAGCC
CCTCAATGTCCATTCCCAGATAAGTTCCTGGGCACTGCCCTTAACACAGGCCTTTTTGAC
TATGTCTGGGTGCAATTCTATAACAATGCCCCATGCCAGTATTCTTCTGGCAACACCAAT
AACCTTCTGAATTCATGGAACCGGTGGACTTCATCGATAAATTCACGGATCTTCATGGGC
CTGCCGGCATCCTCTGCAGCTGCCGGAAGTGGGTTTATTCCGGCCAATGTGTTGACCTCT
CAAATTCTTCCGGTCATTAAGAGATCAGCCAAGTATGGAGGCGTGATGCTGTGGTCAAAG
TACTATGATGATCAGAGTGGATACAGCTCTTCCATTAAGAGCAGTGTGTGA

Peptide Sequence

PEP ID

VIT_16s0050g02220.t01
PEP Infomation

pep chromosome:12X:16:19180654:19188753:-1 gene:VIT_16s0050g02220 transcript:VIT_16s0050g02220.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNQRQVGRTIGDDILSSADSYHYFIILKENETKMELLKVEPRPKSEPEKPSPSDEYTDLC
IAWESSRVSCWLERQPPARMARTPQSTPLLISLSVLALLQTSYAGGIAIYWGQNGNEGTL
TQTCNTGKYSYVNIAFLNKFGNGQTPEINLAGHCNPASNGCTSVSTGIRNCQNRGIKVML
SIGGGVGSYSLSSSNDAQNVANYLWNNFLGGQSSSRPLGDAVLDGIDFDIELGSTLHWDD
LARALSGFSKRGRKVYLTAAPQCPFPDKFLGTALNTGLFDYVWVQFYNNAPCQYSSGNTN
NLLNSWNRWTSSINSRIFMGLPASSAAAGSGFIPANVLTSQILPVIKRSAKYGGVMLWSK
YYDDQSGYSSSIKSSV

Transcript Sequence

Transcript ID

VIT_16s0050g02220.t01
Transcript Infomation

cdna chromosome:12X:16:19180654:19188753:-1 gene:VIT_16s0050g02220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAACCAAAGACAGGTTGGGCGTACAATTGGAGATGACATTCTTTCCTCAGCAGATTCG
TACCACTACTTCATTATTTTAAAGGAGAATGAAACAAAGATGGAGCTTCTGAAAGTGGAG
CCAAGACCCAAATCAGAACCAGAGAAACCATCACCTTCAGATGAGTATACAGATCTTTGC
ATTGCCTGGGAGTCATCTCGTGTATCCTGCTGGCTTGAAAGACAGCCTCCTGCAAGAATG
GCTAGAACCCCCCAATCCACACCTCTGCTCATCTCCCTCTCAGTCCTAGCCCTCCTCCAG
ACCTCTTATGCTGGTGGCATCGCCATCTACTGGGGCCAAAACGGCAATGAAGGGACCCTA
ACCCAAACCTGCAACACCGGAAAATACTCCTACGTTAACATAGCCTTCCTCAACAAGTTC
GGTAATGGCCAGACCCCTGAAATCAACCTTGCTGGCCATTGCAACCCTGCTTCCAATGGC
TGCACCTCCGTCAGTACCGGCATAAGAAACTGCCAAAATCGAGGCATTAAGGTCATGCTC
TCTATAGGTGGTGGGGTTGGAAGTTACTCTCTGTCCTCTTCCAATGATGCCCAAAACGTA
GCCAATTATCTGTGGAACAACTTCTTGGGAGGACAATCATCGTCTCGGCCATTAGGTGAT
GCAGTATTAGATGGCATAGACTTCGACATCGAGCTCGGTTCGACCCTGCACTGGGATGAC
CTTGCTCGAGCCTTATCAGGTTTCAGCAAGCGTGGAAGGAAGGTATACCTCACTGCAGCC
CCTCAATGTCCATTCCCAGATAAGTTCCTGGGCACTGCCCTTAACACAGGCCTTTTTGAC
TATGTCTGGGTGCAATTCTATAACAATGCCCCATGCCAGTATTCTTCTGGCAACACCAAT
AACCTTCTGAATTCATGGAACCGGTGGACTTCATCGATAAATTCACGGATCTTCATGGGC
CTGCCGGCATCCTCTGCAGCTGCCGGAAGTGGGTTTATTCCGGCCAATGTGTTGACCTCT
CAAATTCTTCCGGTCATTAAGAGATCAGCCAAGTATGGAGGCGTGATGCTGTGGTCAAAG
TACTATGATGATCAGAGTGGATACAGCTCTTCCATTAAGAGCAGTGTGTGAACTGGGTGT
TAGTCTATCTATATCAGTTGTAATAATATATTGAATAAGCTTTCATCCTCGATGAATGTA
TGGATAAAGTGAAAGAGAATATTATGGAGAATATAGTATGAAGAATTATAAAGA