Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0050g01420.t01
CDS Infomation

cds chromosome:12X:16:18302926:18313101:1 gene:VIT_16s0050g01420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGTGCAGGAAGTTCCAGATTGCCATTCTTTCAGCTCAAGGTCTTGAGAACGTCCGA
GAAATATTCAGAATGAAAGTCTACGCCCAGCTTTCAATCCCCGGCAATCCCCAAATAAAG
AGAGAAACCCCAGTGGACACAGAGGGGGAGACCAACCCCGCATGGAACTCCACCATTAGA
TTCACAATAGGCAATCAGGCAGTCGAACACCAAGGCGTCGTGTTCGTCATCAAGCTATAC
TGCAGCCGGGCCCTAGGAGACCGGTACATCGGTGAGGTGAGCCTATCTTTCAAGGACCTG
TTTGATGGTGCCGCACCCACCAGCCAAGGCCGCAGCAGCGGTATTGTAAGTTACCCAGTG
AAAAAGGGTGGAGCGGATTCACAGGGGGTATTGAACTTTTCATACTCTTTTGGGGATATA
GTGATGGTTAAGAAACCATCCCTTTTCTCGACCAGAAATTTGGCAGTTGCAGAATCTGCT
ATCAGAGAAAGAAAACGGAATAAAGAAAAATTGAAGCAAGCAGGTTCAACTCATGTGGCC
TCTACATATTCTGATGTTCAATCTCCAGGATCAGCTGGAGAAAGACATCAAAACGCAAAC
AATGTGCAGCCCTGCATGAAGGAACTTGGTCCTAGAACAGTTGAAGCAGAGAGGTTTAAT
TGTCACATTTCTCCAGTCATATTTTATGGATCTCCACATGGTGTGCCTCCAAAAAGGCCA
TCCAGTTTGTTGCGATTATTACGTGAAATACGTGTTGAGCTCAGTGAACAAAATAAATCA
GACCTGAGGGAGGAAGTATGGGCTACATTTCCAAGACAGGATGAATCAATTAAGTTTGCA
CAAGGACATGCTGATGTGCATATTTTCAGTTATCAGGATCACTTGAATGGACAAAGAAGA
TTCCTGGTTTCAACATACAAGGAGTTCTGGCAAAGGTACAAAAATATGGATTCTAAGTTC
CGCCATCATTATGAAGTGATTCAAGAGGGTTTCCCATGTCACCTTTATTTTGATTTGGAG
TTCAATAAGAAAGACAATGCAGAAAAAGATGGAGATGAAATGGTTGATCTCTTGATCTCA
GTTGTTTCAGAAGCCTTACTGGAGAAATACTCTATTCAAGTAAATGAGAAATGGATAGTA
GAGCTTGATTCCTCCACTGGAGAAAAATTTTCACGTCATCTAATTATTCGCATACCAAAG
ATTGCCTTCAAGGACAACTCACATGCTGGTGTATTTGTTGCTGAGATATGCTCACAGATT
TCAAGTGCAGGGGAGGGGGATGGAAATTTTAAGAAGTTGTTTATTTCAAAAGGATCAACC
TCTGCTGAGTTCCCCTGCCAGCTTTTTGTAGACACTGCTGTTTATTCCAGAAATCGCTGC
TTTCGGTTAGCTCTATCATCCAAGGCTGGGAAGAATTCAGTGCTTCTACCTACGGGGCGT
TTCAAATGCAAGGACATGTGTGAGGAAGAAATGTTCATGGCATCCTTGATCTGCAATATT
GATGTTGACTGTGAGAAGTTTCTAGTCTGTAAAATGGATTTAAATTGTGTGAAGACCCTA
CATTTTGATATGGAGGAGAACCATAATTGTAGAAAACATTCCAGCTCCCCTCAAGACTTT
GCATTGAGTGCTTGCACAAGCAATGTTTCAGGCACATGCTTCATGGGAAATTCACCATTC
CCAGCTTTGGATATATTTGTAGAATCAATTGCCTCCATTGGAAATGTATCAGGAAAAATT
CGAAGCTGGTATTGGTTCTCTGAATACAGATTGATGGTCTACAGCATGTCAAGAAATAGA
TACTGTGAGCGAATTGGCAGACAGCATAAAAGCAATCATGTTATCTATGTTGTTGACCTC
AGAAGGGCTATTTTTTATCAGAAATGTCATGATCCAGATTGCAGAGGTTATCGATCTCCC
TCGCGTCCAATACCAATGGATGTCATTCCCAATACAGCAGTTCTCATGGATTCAGTACAG
ACAGAGCATCATGTAGAGTCAACCAGCAATCACCTTGGATACAGTCTTGTGGAAAATGAT
CAGGAATGTGTTTCACTTTACAATGACAAAAGCATTACCGACAGCTGCAAGAAAGATGCA
TGGTGGCTTGAAGCCATAAGATTTGCAGATAATGTCGAAAGTGTGCAACATATGCGAGAC
CTCAGTGACACGGAAAACATAGATGATGAAGACGATGATTGGTGGATGGCTGCTGAAAGG
ACTGCTTCCCAGACTGAACAAACCTACTTCAACCACAAAAGTTAA

Peptide Sequence

PEP ID

VIT_16s0050g01420.t01
PEP Infomation

pep chromosome:12X:16:18302926:18313101:1 gene:VIT_16s0050g01420 transcript:VIT_16s0050g01420.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MECRKFQIAILSAQGLENVREIFRMKVYAQLSIPGNPQIKRETPVDTEGETNPAWNSTIR
FTIGNQAVEHQGVVFVIKLYCSRALGDRYIGEVSLSFKDLFDGAAPTSQGRSSGIVSYPV
KKGGADSQGVLNFSYSFGDIVMVKKPSLFSTRNLAVAESAIRERKRNKEKLKQAGSTHVA
STYSDVQSPGSAGERHQNANNVQPCMKELGPRTVEAERFNCHISPVIFYGSPHGVPPKRP
SSLLRLLREIRVELSEQNKSDLREEVWATFPRQDESIKFAQGHADVHIFSYQDHLNGQRR
FLVSTYKEFWQRYKNMDSKFRHHYEVIQEGFPCHLYFDLEFNKKDNAEKDGDEMVDLLIS
VVSEALLEKYSIQVNEKWIVELDSSTGEKFSRHLIIRIPKIAFKDNSHAGVFVAEICSQI
SSAGEGDGNFKKLFISKGSTSAEFPCQLFVDTAVYSRNRCFRLALSSKAGKNSVLLPTGR
FKCKDMCEEEMFMASLICNIDVDCEKFLVCKMDLNCVKTLHFDMEENHNCRKHSSSPQDF
ALSACTSNVSGTCFMGNSPFPALDIFVESIASIGNVSGKIRSWYWFSEYRLMVYSMSRNR
YCERIGRQHKSNHVIYVVDLRRAIFYQKCHDPDCRGYRSPSRPIPMDVIPNTAVLMDSVQ
TEHHVESTSNHLGYSLVENDQECVSLYNDKSITDSCKKDAWWLEAIRFADNVESVQHMRD
LSDTENIDDEDDDWWMAAERTASQTEQTYFNHKS

Transcript Sequence

Transcript ID

VIT_16s0050g01420.t01
Transcript Infomation

cdna chromosome:12X:16:18302926:18313101:1 gene:VIT_16s0050g01420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTGAATTAAGTTGAATTACTCTCTTTGCATCTTCTGATCAGGAATTCAAACATGGAGTGC
AGGAAGTTCCAGATTGCCATTCTTTCAGCTCAAGGTCTTGAGAACGTCCGAGAAATATTC
AGAATGAAAGTCTACGCCCAGCTTTCAATCCCCGGCAATCCCCAAATAAAGAGAGAAACC
CCAGTGGACACAGAGGGGGAGACCAACCCCGCATGGAACTCCACCATTAGATTCACAATA
GGCAATCAGGCAGTCGAACACCAAGGCGTCGTGTTCGTCATCAAGCTATACTGCAGCCGG
GCCCTAGGAGACCGGTACATCGGTGAGGTGAGCCTATCTTTCAAGGACCTGTTTGATGGT
GCCGCACCCACCAGCCAAGGCCGCAGCAGCGGTATTGTAAGTTACCCAGTGAAAAAGGGT
GGAGCGGATTCACAGGGGGTATTGAACTTTTCATACTCTTTTGGGGATATAGTGATGGTT
AAGAAACCATCCCTTTTCTCGACCAGAAATTTGGCAGTTGCAGAATCTGCTATCAGAGAA
AGAAAACGGAATAAAGAAAAATTGAAGCAAGCAGGTTCAACTCATGTGGCCTCTACATAT
TCTGATGTTCAATCTCCAGGATCAGCTGGAGAAAGACATCAAAACGCAAACAATGTGCAG
CCCTGCATGAAGGAACTTGGTCCTAGAACAGTTGAAGCAGAGAGGTTTAATTGTCACATT
TCTCCAGTCATATTTTATGGATCTCCACATGGTGTGCCTCCAAAAAGGCCATCCAGTTTG
TTGCGATTATTACGTGAAATACGTGTTGAGCTCAGTGAACAAAATAAATCAGACCTGAGG
GAGGAAGTATGGGCTACATTTCCAAGACAGGATGAATCAATTAAGTTTGCACAAGGACAT
GCTGATGTGCATATTTTCAGTTATCAGGATCACTTGAATGGACAAAGAAGATTCCTGGTT
TCAACATACAAGGAGTTCTGGCAAAGGTACAAAAATATGGATTCTAAGTTCCGCCATCAT
TATGAAGTGATTCAAGAGGGTTTCCCATGTCACCTTTATTTTGATTTGGAGTTCAATAAG
AAAGACAATGCAGAAAAAGATGGAGATGAAATGGTTGATCTCTTGATCTCAGTTGTTTCA
GAAGCCTTACTGGAGAAATACTCTATTCAAGTAAATGAGAAATGGATAGTAGAGCTTGAT
TCCTCCACTGGAGAAAAATTTTCACGTCATCTAATTATTCGCATACCAAAGATTGCCTTC
AAGGACAACTCACATGCTGGTGTATTTGTTGCTGAGATATGCTCACAGATTTCAAGTGCA
GGGGAGGGGGATGGAAATTTTAAGAAGTTGTTTATTTCAAAAGGATCAACCTCTGCTGAG
TTCCCCTGCCAGCTTTTTGTAGACACTGCTGTTTATTCCAGAAATCGCTGCTTTCGGTTA
GCTCTATCATCCAAGGCTGGGAAGAATTCAGTGCTTCTACCTACGGGGCGTTTCAAATGC
AAGGACATGTGTGAGGAAGAAATGTTCATGGCATCCTTGATCTGCAATATTGATGTTGAC
TGTGAGAAGTTTCTAGTCTGTAAAATGGATTTAAATTGTGTGAAGACCCTACATTTTGAT
ATGGAGGAGAACCATAATTGTAGAAAACATTCCAGCTCCCCTCAAGACTTTGCATTGAGT
GCTTGCACAAGCAATGTTTCAGGCACATGCTTCATGGGAAATTCACCATTCCCAGCTTTG
GATATATTTGTAGAATCAATTGCCTCCATTGGAAATGTATCAGGAAAAATTCGAAGCTGG
TATTGGTTCTCTGAATACAGATTGATGGTCTACAGCATGTCAAGAAATAGATACTGTGAG
CGAATTGGCAGACAGCATAAAAGCAATCATGTTATCTATGTTGTTGACCTCAGAAGGGCT
ATTTTTTATCAGAAATGTCATGATCCAGATTGCAGAGGTTATCGATCTCCCTCGCGTCCA
ATACCAATGGATGTCATTCCCAATACAGCAGTTCTCATGGATTCAGTACAGACAGAGCAT
CATGTAGAGTCAACCAGCAATCACCTTGGATACAGTCTTGTGGAAAATGATCAGGAATGT
GTTTCACTTTACAATGACAAAAGCATTACCGACAGCTGCAAGAAAGATGCATGGTGGCTT
GAAGCCATAAGATTTGCAGATAATGTCGAAAGTGTGCAACATATGCGAGACCTCAGTGAC
ACGGAAAACATAGATGATGAAGACGATGATTGGTGGATGGCTGCTGAAAGGACTGCTTCC
CAGACTGAACAAACCTACTTCAACCACAAAAGTTAAAACATCAAAACCAAATCCAGTTTT
CAATGATCAATGCTCAGAGGCAAAAGGAAAGTTTCTTGTGGCATTTTCCTCTCGAAGACA
AGCTTATTAACAATTAGTAGATTGGCTCGTGATGTCATCGGATGTGGTGAA