Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0050g01290.t01
CDS Infomation

cds chromosome:12X:16:18150126:18152956:-1 gene:VIT_16s0050g01290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGCGAGCGATGTGCCATGTTGTGAGACAATGTTCTGGATATATCTGGTTATATGC
GTAGCTCTTGTGTCTTTTGCTGGTCTAATGTCAGGCCTCACTCTGGGACTCATGTCCCTC
AGCCTTGTTGATCTAGAGGTCCTGGCCAAGGCTGGTCGGCCCCAAGATAGGAGGAATGCA
GAGAAGATCCTGCCCATTGTTAAGAACCAGCACTTGCTCCTGTGTACCCTCCTCATAGGC
AATTCTCTGGCAATGGAGGCCCTGCCCATTTTCCTTGATGCGCTTGTCCCAGCTTGGGGT
GCTATATTGATATCAGTCACCCTCATACTTGCTTTTGGGGAGATCATCCCTCAAGCTGTC
TGCTCCCAGTATGGTCTGAGCGTCGGTGCAAAACTGTCTGTTGTGGTTCGGTTACTTGTT
TTAGTCCTCTTCCCTATATCTTACCCTATCAGTAAGCTCCTGGATTGGCTCCTTGGAAAG
GGCCATTCTGCGCTGTTACGGCGAGCAGAGCTAAAGACCTTGGTGGATATGCATGGAAAC
GAGGCAGGGAGAGGTGGGGAGTTGACACATGATGAAACAACCATTATCTCTGGAGTTTTG
GACATGACACAGAAGACAGCTAAAGATGCAATGACACCCATATCTGAAATATTTTCCCTT
GACATAAACACTAGACTCGACGAGGATACAATGAGCCTAATACTTAACAGAGGGCATAGT
CGAATACCCGTCTTCTCAGGAAGCCTGACAAATATAATCGGCCTTATTTTGGTGAAAAAT
CTGATCAAATGTCGTGCAGAAGATGAAACCCCAATCAGGAATCTTACTATTAGAAGAATC
CCCAGGGTATATGATTGTTTACCACTGTATGATATACTAAATCAATTCCAGAAGGGTCAC
AGTCATATGGCTGTTGTTGTGAAGTGTAGGAAGGATGTCAAGACAAATACAGAAAATGCA
AACACCAAACCCTGCACATTTGCGATAAATAACTCGAATTCGAGGCAAAGACAAGCCAAG
AATAAAGGAGTTGACAATCAGTTTTGTCCAAGTGTACAGCTGAATATCTCTAGAAATGTG
TCCTCTGAATCTAAAAATCCGACGTTAAAGAAAATGATGGAGCAAGGCAAAGGTGCGAGT
CCACGGTTAAAAAAATGGGGAAGTGGAGATGGAAATGTTACAGATGAAGACTTGGAATCT
CTTCCAAATTTGGATGAAGAGGTCATTGGTATCATAACAATGGAGGATGTCATGGAAGAA
CTGCTGCAGGAGGAGATATTGGATGAGACAGATGAGTACATCGATGTTCACAACAAGATC
AAAATCAATATGCTTCCATCAAGAAGATCATCATCAAGATCTCCTGCAGTGGCACTGGCC
TCTCACCTTCACTGGCGATCGCCAGTGGCATCTCCGCTTTCTTCATGTGGTCATACTCCA
GTACTAGACTCACCAGTCTCCCCCTATGTTTATCCATCCTTTATAAGACCCACTCTCTCT
GCTTCACCTGGGATTTCTATGCCAAATTCTCCAGCTGGTCTTGCAGGCCCTATTCGCAGC
TCACCATCCCCACATCGGGTTTCAAGAAAATCATACGAGAAGATAAGGCAACCAGGTGGT
TAA

Peptide Sequence

PEP ID

VIT_16s0050g01290.t01
PEP Infomation

pep chromosome:12X:16:18150126:18152956:-1 gene:VIT_16s0050g01290 transcript:VIT_16s0050g01290.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAASDVPCCETMFWIYLVICVALVSFAGLMSGLTLGLMSLSLVDLEVLAKAGRPQDRRNA
EKILPIVKNQHLLLCTLLIGNSLAMEALPIFLDALVPAWGAILISVTLILAFGEIIPQAV
CSQYGLSVGAKLSVVVRLLVLVLFPISYPISKLLDWLLGKGHSALLRRAELKTLVDMHGN
EAGRGGELTHDETTIISGVLDMTQKTAKDAMTPISEIFSLDINTRLDEDTMSLILNRGHS
RIPVFSGSLTNIIGLILVKNLIKCRAEDETPIRNLTIRRIPRVYDCLPLYDILNQFQKGH
SHMAVVVKCRKDVKTNTENANTKPCTFAINNSNSRQRQAKNKGVDNQFCPSVQLNISRNV
SSESKNPTLKKMMEQGKGASPRLKKWGSGDGNVTDEDLESLPNLDEEVIGIITMEDVMEE
LLQEEILDETDEYIDVHNKIKINMLPSRRSSSRSPAVALASHLHWRSPVASPLSSCGHTP
VLDSPVSPYVYPSFIRPTLSASPGISMPNSPAGLAGPIRSSPSPHRVSRKSYEKIRQPGG

Transcript Sequence

Transcript ID

VIT_16s0050g01290.t01
Transcript Infomation

cdna chromosome:12X:16:18150126:18152956:-1 gene:VIT_16s0050g01290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AACAATGGCAGCGAGCGATGTGCCATGTTGTGAGACAATGTTCTGGATATATCTGGTTAT
ATGCGTAGCTCTTGTGTCTTTTGCTGGTCTAATGTCAGGCCTCACTCTGGGACTCATGTC
CCTCAGCCTTGTTGATCTAGAGGTCCTGGCCAAGGCTGGTCGGCCCCAAGATAGGAGGAA
TGCAGAGAAGATCCTGCCCATTGTTAAGAACCAGCACTTGCTCCTGTGTACCCTCCTCAT
AGGCAATTCTCTGGCAATGGAGGCCCTGCCCATTTTCCTTGATGCGCTTGTCCCAGCTTG
GGGTGCTATATTGATATCAGTCACCCTCATACTTGCTTTTGGGGAGATCATCCCTCAAGC
TGTCTGCTCCCAGTATGGTCTGAGCGTCGGTGCAAAACTGTCTGTTGTGGTTCGGTTACT
TGTTTTAGTCCTCTTCCCTATATCTTACCCTATCAGTAAGCTCCTGGATTGGCTCCTTGG
AAAGGGCCATTCTGCGCTGTTACGGCGAGCAGAGCTAAAGACCTTGGTGGATATGCATGG
AAACGAGGCAGGGAGAGGTGGGGAGTTGACACATGATGAAACAACCATTATCTCTGGAGT
TTTGGACATGACACAGAAGACAGCTAAAGATGCAATGACACCCATATCTGAAATATTTTC
CCTTGACATAAACACTAGACTCGACGAGGATACAATGAGCCTAATACTTAACAGAGGGCA
TAGTCGAATACCCGTCTTCTCAGGAAGCCTGACAAATATAATCGGCCTTATTTTGGTGAA
AAATCTGATCAAATGTCGTGCAGAAGATGAAACCCCAATCAGGAATCTTACTATTAGAAG
AATCCCCAGGGTATATGATTGTTTACCACTGTATGATATACTAAATCAATTCCAGAAGGG
TCACAGTCATATGGCTGTTGTTGTGAAGTGTAGGAAGGATGTCAAGACAAATACAGAAAA
TGCAAACACCAAACCCTGCACATTTGCGATAAATAACTCGAATTCGAGGCAAAGACAAGC
CAAGAATAAAGGAGTTGACAATCAGTTTTGTCCAAGTGTACAGCTGAATATCTCTAGAAA
TGTGTCCTCTGAATCTAAAAATCCGACGTTAAAGAAAATGATGGAGCAAGGCAAAGGTGC
GAGTCCACGGTTAAAAAAATGGGGAAGTGGAGATGGAAATGTTACAGATGAAGACTTGGA
ATCTCTTCCAAATTTGGATGAAGAGGTCATTGGTATCATAACAATGGAGGATGTCATGGA
AGAACTGCTGCAGGAGGAGATATTGGATGAGACAGATGAGTACATCGATGTTCACAACAA
GATCAAAATCAATATGCTTCCATCAAGAAGATCATCATCAAGATCTCCTGCAGTGGCACT
GGCCTCTCACCTTCACTGGCGATCGCCAGTGGCATCTCCGCTTTCTTCATGTGGTCATAC
TCCAGTACTAGACTCACCAGTCTCCCCCTATGTTTATCCATCCTTTATAAGACCCACTCT
CTCTGCTTCACCTGGGATTTCTATGCCAAATTCTCCAGCTGGTCTTGCAGGCCCTATTCG
CAGCTCACCATCCCCACATCGGGTTTCAAGAAAATCATACGAGAAGATAAGGCAACCAGG
TGGTTAA