Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0050g00780.t01
CDS Infomation

cds chromosome:12X:16:17723537:17726378:-1 gene:VIT_16s0050g00780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTATGGCTGTTTCTGCAAAGCTGGTTCTAGGCTCAATTGCCTTTGCAATATTCTGG
GTGTTGGCGGTTTTTCCTGCTGTCCCTTTCCTACCTATTGGGAGGACTGCAGGGTCTCTC
CTGGGGGCAATGCTCATGGTCAGTTTTCGTGTGATAACCCCAGATCAAGCATATGATGCC
ATTGATCTCCCAATCCTTGGTCTTCTGTTTGGGACTATGGTTGTCAGCATTTATCTTGAA
AGAGCAGATATGTTCAAATATTTGGGTAAACTTCTCTCATGGAAAAGCTTAGGAGCCAAA
GACTTACTATGTCGAATCTGCCTCATATCGGCCATTTCAAGTAGTCTTTTCACCAATGAT
ACCACTTGTGTCGTCTTGACCGAATTTGTTCTGAAAATTGCAAGGCAGCATAATCTTCCA
CCCCATCCTTTCCTTTTAGCCCTTGCCTCAAGTGCAAATATTGGGTCTTCTGCAACTCCA
ATTGGCAACCCGCAAAATCTTGTTATAGCCCTCGAGAGTAAGATTTCATTCGGGGATTTC
GTACTTGGAATTCTTCCTGCAATGCTTGTAGGAGTACTTGTGAATGCTTTAATTCTTCTT
TGCATGTATTGGAGGTTGTTGTCTGTTCAGAAAGACGAAGAAGATGCAACTCTAGAAGTG
GTAGCCGAGGAGGATGTCAATTTTCATCATTTTTCACCTGCAACAATGTCACATATAACA
TCCTTAGATTCTCACGAATGGAATTCAAAAGCCGAAATTGTGAATATCGACAGCCAGGCT
AATGTGAAGGGAAACATAGGTCATGCTGAGACCCTCAGAAATCGAATAAGAAACGAAAAT
GAACTCCATAGGACCTCCAGTTCTGGGTCTGTGTCCTCTGCAAATTCAAATGGTTCAAAA
GATCTGACAAGTGAGTTACATTCTCAAAGAAGGGACGAAAATCAAAATATACTTTCAAAT
GGGACTGCATCAATGGATGAACCAGGAGATGCAGTCTTTATGCAGTCTTTAGACGAAAAG
GAAAATCCGACCACAAAATGGAAAAGGCTATTATGGAAACCATGTGTTTACCTTGTTACT
ATAGGAATGCTGATTTCTTTGCTCATGGGTCTCAATATGTCATGGACTGCAATTGCTGCT
GCACTGGCTCTTGTAGTTCTTGATTTCAAGGATGCTCGGCCTTCCCTAGAGAAGGTCTCC
TATTCCCTTTTGATTTTCTTCTGCGGAATGTTCATTACAGTTGATGGTTTCAACAAAACT
GGAATCCCTAGCGCAGTATGGGACTTAATGGAGCCTTACGCAAAGATTGACCATGTTAGT
GGGATCGCAGTTCTTGCTGTTGTCATACTTGTCCTGTCAAATGTGGCTTCTAATGTACCA
ACCGTTCTCTTGCTTGGAGCACGGGTGGCAGCATCAGCAGCTCAAATTTCCGCAGCCGAA
GAGAAGAAGGCATGGCTGATCTTAGCTTGGGTCAGCACTGTGGCCGGAAACCTCTCCCTG
TTGGGATCAGCTGCCAACTTGATAGTTTGTGAGCAGGCTCGCCGGGCTCAACACCTTGGG
TACACTCTATCCTTCTGGAGGCATCTCAAATTTGGAGTTCCCGCCACTCTTGTAGTCACT
GCCATTGGTTTGACACTAATAAGAGGATGA

Peptide Sequence

PEP ID

VIT_16s0050g00780.t01
PEP Infomation

pep chromosome:12X:16:17723537:17726378:-1 gene:VIT_16s0050g00780 transcript:VIT_16s0050g00780.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAMAVSAKLVLGSIAFAIFWVLAVFPAVPFLPIGRTAGSLLGAMLMVSFRVITPDQAYDA
IDLPILGLLFGTMVVSIYLERADMFKYLGKLLSWKSLGAKDLLCRICLISAISSSLFTND
TTCVVLTEFVLKIARQHNLPPHPFLLALASSANIGSSATPIGNPQNLVIALESKISFGDF
VLGILPAMLVGVLVNALILLCMYWRLLSVQKDEEDATLEVVAEEDVNFHHFSPATMSHIT
SLDSHEWNSKAEIVNIDSQANVKGNIGHAETLRNRIRNENELHRTSSSGSVSSANSNGSK
DLTSELHSQRRDENQNILSNGTASMDEPGDAVFMQSLDEKENPTTKWKRLLWKPCVYLVT
IGMLISLLMGLNMSWTAIAAALALVVLDFKDARPSLEKVSYSLLIFFCGMFITVDGFNKT
GIPSAVWDLMEPYAKIDHVSGIAVLAVVILVLSNVASNVPTVLLLGARVAASAAQISAAE
EKKAWLILAWVSTVAGNLSLLGSAANLIVCEQARRAQHLGYTLSFWRHLKFGVPATLVVT
AIGLTLIRG

Transcript Sequence

Transcript ID

VIT_16s0050g00780.t01
Transcript Infomation

cdna chromosome:12X:16:17723537:17726378:-1 gene:VIT_16s0050g00780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTGTTAAGCTGCAGAGATGGCTATGGCTGTTTCTGCAAAGCTGGTTCTAGGCTCAATTG
CCTTTGCAATATTCTGGGTGTTGGCGGTTTTTCCTGCTGTCCCTTTCCTACCTATTGGGA
GGACTGCAGGGTCTCTCCTGGGGGCAATGCTCATGGTCAGTTTTCGTGTGATAACCCCAG
ATCAAGCATATGATGCCATTGATCTCCCAATCCTTGGTCTTCTGTTTGGGACTATGGTTG
TCAGCATTTATCTTGAAAGAGCAGATATGTTCAAATATTTGGGTAAACTTCTCTCATGGA
AAAGCTTAGGAGCCAAAGACTTACTATGTCGAATCTGCCTCATATCGGCCATTTCAAGTA
GTCTTTTCACCAATGATACCACTTGTGTCGTCTTGACCGAATTTGTTCTGAAAATTGCAA
GGCAGCATAATCTTCCACCCCATCCTTTCCTTTTAGCCCTTGCCTCAAGTGCAAATATTG
GGTCTTCTGCAACTCCAATTGGCAACCCGCAAAATCTTGTTATAGCCCTCGAGAGTAAGA
TTTCATTCGGGGATTTCGTACTTGGAATTCTTCCTGCAATGCTTGTAGGAGTACTTGTGA
ATGCTTTAATTCTTCTTTGCATGTATTGGAGGTTGTTGTCTGTTCAGAAAGACGAAGAAG
ATGCAACTCTAGAAGTGGTAGCCGAGGAGGATGTCAATTTTCATCATTTTTCACCTGCAA
CAATGTCACATATAACATCCTTAGATTCTCACGAATGGAATTCAAAAGCCGAAATTGTGA
ATATCGACAGCCAGGCTAATGTGAAGGGAAACATAGGTCATGCTGAGACCCTCAGAAATC
GAATAAGAAACGAAAATGAACTCCATAGGACCTCCAGTTCTGGGTCTGTGTCCTCTGCAA
ATTCAAATGGTTCAAAAGATCTGACAAGTGAGTTACATTCTCAAAGAAGGGACGAAAATC
AAAATATACTTTCAAATGGGACTGCATCAATGGATGAACCAGGAGATGCAGTCTTTATGC
AGTCTTTAGACGAAAAGGAAAATCCGACCACAAAATGGAAAAGGCTATTATGGAAACCAT
GTGTTTACCTTGTTACTATAGGAATGCTGATTTCTTTGCTCATGGGTCTCAATATGTCAT
GGACTGCAATTGCTGCTGCACTGGCTCTTGTAGTTCTTGATTTCAAGGATGCTCGGCCTT
CCCTAGAGAAGGTCTCCTATTCCCTTTTGATTTTCTTCTGCGGAATGTTCATTACAGTTG
ATGGTTTCAACAAAACTGGAATCCCTAGCGCAGTATGGGACTTAATGGAGCCTTACGCAA
AGATTGACCATGTTAGTGGGATCGCAGTTCTTGCTGTTGTCATACTTGTCCTGTCAAATG
TGGCTTCTAATGTACCAACCGTTCTCTTGCTTGGAGCACGGGTGGCAGCATCAGCAGCTC
AAATTTCCGCAGCCGAAGAGAAGAAGGCATGGCTGATCTTAGCTTGGGTCAGCACTGTGG
CCGGAAACCTCTCCCTGTTGGGATCAGCTGCCAACTTGATAGTTTGTGAGCAGGCTCGCC
GGGCTCAACACCTTGGGTACACTCTATCCTTCTGGAGGCATCTCAAATTTGGAGTTCCCG
CCACTCTTGTAGTCACTGCCATTGGTTTGACACTAATAAGAGGATGATACCAGCAATATC
ATGATTCCCCCAAGTTCATATGAATTGGGGGGATCTGATTCAATTCTTTGAGCTACAATT
CTCACCAATTCCTTGTCTTGGAGAGCTAGAATTAAAATTTGGAAATTGTATTTAGAAACT
ACTGTTTGTAAATTTGTACTGAAACTGTATTTTCAAGACT