Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0050g00770.t01
CDS Infomation

cds chromosome:12X:16:17708276:17713661:-1 gene:VIT_16s0050g00770 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCTTCATGGTGGGGAAAATCATCATCCAAAGAAGCAAAGAAGAAAACAAACAAGGAA
AGTTTCATCGACACATTACATCGAAAATTTAAGATTCCATCTGAAGGTAAGGTGAGCAAT
AGATCAGGAGGGTCTCATAGACGGTGCAGTGATACAATATCAGAGAAGGGATCTCAATCC
CGAGCAGAATCAAGATCACCATCACCTTCCAAACTAGTGTCAAGATGTCAAAGTTTTGTT
GAAAGGCCTAATGCCCAACCACTTCCACTTCCTGGTCGGCACCCTGCAAGTGTGGGTCGT
ACTGATTCTGGAATCAGTATATCAACAAAACAAAGACTGGAAAAAGGCTCCAAGTCATCC
TTTCTTCCTCTCCCAAGACCCAGATGCATTGGGGGCAGACCCGATCCTACAGATTTAGAT
GGTGATTTTGTTGCTTCAGTTTATAGCGAAGGTTCCACTGATAGTGAAGATGCAGCTGAC
TCACATCATCGTAGTCCCCAGGCAACTGACTATGATAATGGGACTAGAACTGCTGCAAGC
ATATTTTCTAGTGTAATGCTCAAGGATCAGTCACCTGTTGCTCATGTAAACGCAAGGGAG
GCACAAAAACCAGCTAATCTTTTGTTTAGTAATCATATTTCCCCTACATCACCTAAACGG
AGGCCTTTAAGCAGCCATGTACCAAATTTACAGGTCCCTTATCATGGTGCTTTCGGCAGT
GCTCCAGACAGCTCAATGTCAAGTCCTTCAAGAAGTCCATTGAGAGCATTTGGCACTGAC
CAAGGTTTGAACTCTGCTTTCTGGGCTGGGAAACCTTATTCAGATGTTACTTTACTTGGA
TCTGGCCAATGCTCCAGTCCAGGTTCAGGTCAGAATTCTGGGCACAATTCAATGGGAGGA
GATATGTCAGGACAGTTGTTTTGGCAACCCAGCAGGGGCAGCCCGGAGTATTCTCCTATA
CCTAGTCCCAGAATGACAAGCCCTGGTCCCAGCTCCAGAATTCATAGTGGTGCAGTCACA
CCTCTTCATCCCAGAGCTGGAGGAGCAGCCTCTGAATCCCAGACAAGCTGGCCAGATGAG
GGGAAACAACAAAGCCACCGGTTGCCCCTTCCTCCTGTAGCAGTTTCTTCTTCTTCACCT
TTCTCTCATTCAAATTCACCAGCAGCATCTCCCTCTGTCCCACGCAGTCCAGGAAGAGCA
GAGGCTCCAACAAGCCCAGGCTCTCGCTGGAAAAAGGGAAAGTTGCTGGGAAGAGGCACA
TTTGGACATGTTTATGTTGGCTTTAACAGTGAAAGTGGTGAAATGTGTGCAATGAAGGAG
GTGACACTATTTTCAGATGATGCAAAGTCAAAGGAAAGTGCAAAACAGTTGGGGCAAGAA
ATTGTTCTGCTTAGCCGCTTATGCCATCCAAACATTGTGCAGTATTATGGATCTGAAACG
GTTGGTGACAAACTTTATATATACTTGGAGTATGTATCTGGTGGCTCCATCTATAAACTT
CTTCAAGAATATGGCCAACTTGGTGAACTAGCAATTCGTAGCTATACCCAACAAATCTTG
TCAGGGCTCGCCTATTTGCATGCTAAAAATACTGTCCATAGGGATATTAAAGGGGCAAAT
ATACTTGTAGACCCAAGTGGTCGAGTCAAGTTAGCAGATTTTGGAATGGCAAAGCATATC
ACTGGGCAGTCATGTCCTTTATCATTCAAGGGAAGCCCATACTGGATGGCACCTGAGGTT
ATAAGGAATTCAAATGGTTGCAACCTTGCTGTGGATATTTGGAGTCTAGGGTGCACAGTT
TTGGAAATGGCCACAACAAAACCACCCTGGAGTCAGTTTGAAGGGGTTGCTGCAATGTTC
AAGATTGGGAATAGTAAGGACCTCCCAGCAATTCCTGATCACCTTTCAGATGAAGGTAAG
GATTTTGTAAGGCAGTGCTTGCAACGAAATCCACTACATCGTCCAACAGCTGCTCAGCTC
TTGGAGCATCCTTTCGTGAAAAATGCTGCACCTCTGGAAAGACCTATTTTGTCCCCTGAA
ACTTCAGATCCACCTCCTGGAGTTACCAATGGAGTGAAATCTCTGGGAATCGGACATGCT
AAAAATCTTTCATCCTTGGATTCAGAAAGACTTGCAGTTCATTCGTTTAGAGTTTTAAAA
ACTGGTTCCCATTCAAGTGATCCTCATATTGCGAGGAATATATCATGTCCTGTCTCTCCT
ATTGGGAGCCCTCTTTTGCATTCAAGGTCACCTCAACACCTGAATGGAAGAATGTCTCCT
TCTCCTATATCCAGTCCTCGTACCACTTCTGGCCCATCCACGCCTTTGACAGGTGGCAGT
GGTGCCATTCCATTTCCTCATCTAAAACCATCAGTTTACCTGCAAGAGGGATTTGGAAAC
GTTTCTAAGCCCCTAAACAATCCCTATTCCAACGGCCCCTCCTATCATGATCCAAATGCC
GACATCTTTCGAGGGATGCAGCTAGGGTCTCACATATTCCCAGAAAGTGATGCTCTTGGA
AAGCAGTTTGGGAGGACTGCTCATGTAGAATTGTATGATGGGCAGTCAGTCTTAGCTGAT
CGCGTCTCTCGGCAGCTCTTAAGGGATCAAGTGAAGATGAATCCATCTCTGGATCTTAGT
CCCTCCTCTATGTTGCCCAGCCGGAACACTGGAATCTAA

Peptide Sequence

PEP ID

VIT_16s0050g00770.t01
PEP Infomation

pep chromosome:12X:16:17708276:17713661:-1 gene:VIT_16s0050g00770 transcript:VIT_16s0050g00770.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPSWWGKSSSKEAKKKTNKESFIDTLHRKFKIPSEGKVSNRSGGSHRRCSDTISEKGSQS
RAESRSPSPSKLVSRCQSFVERPNAQPLPLPGRHPASVGRTDSGISISTKQRLEKGSKSS
FLPLPRPRCIGGRPDPTDLDGDFVASVYSEGSTDSEDAADSHHRSPQATDYDNGTRTAAS
IFSSVMLKDQSPVAHVNAREAQKPANLLFSNHISPTSPKRRPLSSHVPNLQVPYHGAFGS
APDSSMSSPSRSPLRAFGTDQGLNSAFWAGKPYSDVTLLGSGQCSSPGSGQNSGHNSMGG
DMSGQLFWQPSRGSPEYSPIPSPRMTSPGPSSRIHSGAVTPLHPRAGGAASESQTSWPDE
GKQQSHRLPLPPVAVSSSSPFSHSNSPAASPSVPRSPGRAEAPTSPGSRWKKGKLLGRGT
FGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLGQEIVLLSRLCHPNIVQYYGSET
VGDKLYIYLEYVSGGSIYKLLQEYGQLGELAIRSYTQQILSGLAYLHAKNTVHRDIKGAN
ILVDPSGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIRNSNGCNLAVDIWSLGCTV
LEMATTKPPWSQFEGVAAMFKIGNSKDLPAIPDHLSDEGKDFVRQCLQRNPLHRPTAAQL
LEHPFVKNAAPLERPILSPETSDPPPGVTNGVKSLGIGHAKNLSSLDSERLAVHSFRVLK
TGSHSSDPHIARNISCPVSPIGSPLLHSRSPQHLNGRMSPSPISSPRTTSGPSTPLTGGS
GAIPFPHLKPSVYLQEGFGNVSKPLNNPYSNGPSYHDPNADIFRGMQLGSHIFPESDALG
KQFGRTAHVELYDGQSVLADRVSRQLLRDQVKMNPSLDLSPSSMLPSRNTGI

Transcript Sequence

Transcript ID

VIT_16s0050g00770.t01
Transcript Infomation

cdna chromosome:12X:16:17708276:17713661:-1 gene:VIT_16s0050g00770 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTGTTTAAATTTTTAGAATAAACAATATGCCTTCATGGTGGGGAAAATCATCATCCAAA
GAAGCAAAGAAGAAAACAAACAAGGAAAGTTTCATCGACACATTACATCGAAAATTTAAG
ATTCCATCTGAAGGTAAGGTGAGCAATAGATCAGGAGGGTCTCATAGACGGTGCAGTGAT
ACAATATCAGAGAAGGGATCTCAATCCCGAGCAGAATCAAGATCACCATCACCTTCCAAA
CTAGTGTCAAGATGTCAAAGTTTTGTTGAAAGGCCTAATGCCCAACCACTTCCACTTCCT
GGTCGGCACCCTGCAAGTGTGGGTCGTACTGATTCTGGAATCAGTATATCAACAAAACAA
AGACTGGAAAAAGGCTCCAAGTCATCCTTTCTTCCTCTCCCAAGACCCAGATGCATTGGG
GGCAGACCCGATCCTACAGATTTAGATGGTGATTTTGTTGCTTCAGTTTATAGCGAAGGT
TCCACTGATAGTGAAGATGCAGCTGACTCACATCATCGTAGTCCCCAGGCAACTGACTAT
GATAATGGGACTAGAACTGCTGCAAGCATATTTTCTAGTGTAATGCTCAAGGATCAGTCA
CCTGTTGCTCATGTAAACGCAAGGGAGGCACAAAAACCAGCTAATCTTTTGTTTAGTAAT
CATATTTCCCCTACATCACCTAAACGGAGGCCTTTAAGCAGCCATGTACCAAATTTACAG
GTCCCTTATCATGGTGCTTTCGGCAGTGCTCCAGACAGCTCAATGTCAAGTCCTTCAAGA
AGTCCATTGAGAGCATTTGGCACTGACCAAGGTTTGAACTCTGCTTTCTGGGCTGGGAAA
CCTTATTCAGATGTTACTTTACTTGGATCTGGCCAATGCTCCAGTCCAGGTTCAGGTCAG
AATTCTGGGCACAATTCAATGGGAGGAGATATGTCAGGACAGTTGTTTTGGCAACCCAGC
AGGGGCAGCCCGGAGTATTCTCCTATACCTAGTCCCAGAATGACAAGCCCTGGTCCCAGC
TCCAGAATTCATAGTGGTGCAGTCACACCTCTTCATCCCAGAGCTGGAGGAGCAGCCTCT
GAATCCCAGACAAGCTGGCCAGATGAGGGGAAACAACAAAGCCACCGGTTGCCCCTTCCT
CCTGTAGCAGTTTCTTCTTCTTCACCTTTCTCTCATTCAAATTCACCAGCAGCATCTCCC
TCTGTCCCACGCAGTCCAGGAAGAGCAGAGGCTCCAACAAGCCCAGGCTCTCGCTGGAAA
AAGGGAAAGTTGCTGGGAAGAGGCACATTTGGACATGTTTATGTTGGCTTTAACAGTGAA
AGTGGTGAAATGTGTGCAATGAAGGAGGTGACACTATTTTCAGATGATGCAAAGTCAAAG
GAAAGTGCAAAACAGTTGGGGCAAGAAATTGTTCTGCTTAGCCGCTTATGCCATCCAAAC
ATTGTGCAGTATTATGGATCTGAAACGGTTGGTGACAAACTTTATATATACTTGGAGTAT
GTATCTGGTGGCTCCATCTATAAACTTCTTCAAGAATATGGCCAACTTGGTGAACTAGCA
ATTCGTAGCTATACCCAACAAATCTTGTCAGGGCTCGCCTATTTGCATGCTAAAAATACT
GTCCATAGGGATATTAAAGGGGCAAATATACTTGTAGACCCAAGTGGTCGAGTCAAGTTA
GCAGATTTTGGAATGGCAAAGCATATCACTGGGCAGTCATGTCCTTTATCATTCAAGGGA
AGCCCATACTGGATGGCACCTGAGGTTATAAGGAATTCAAATGGTTGCAACCTTGCTGTG
GATATTTGGAGTCTAGGGTGCACAGTTTTGGAAATGGCCACAACAAAACCACCCTGGAGT
CAGTTTGAAGGGGTTGCTGCAATGTTCAAGATTGGGAATAGTAAGGACCTCCCAGCAATT
CCTGATCACCTTTCAGATGAAGGTAAGGATTTTGTAAGGCAGTGCTTGCAACGAAATCCA
CTACATCGTCCAACAGCTGCTCAGCTCTTGGAGCATCCTTTCGTGAAAAATGCTGCACCT
CTGGAAAGACCTATTTTGTCCCCTGAAACTTCAGATCCACCTCCTGGAGTTACCAATGGA
GTGAAATCTCTGGGAATCGGACATGCTAAAAATCTTTCATCCTTGGATTCAGAAAGACTT
GCAGTTCATTCGTTTAGAGTTTTAAAAACTGGTTCCCATTCAAGTGATCCTCATATTGCG
AGGAATATATCATGTCCTGTCTCTCCTATTGGGAGCCCTCTTTTGCATTCAAGGTCACCT
CAACACCTGAATGGAAGAATGTCTCCTTCTCCTATATCCAGTCCTCGTACCACTTCTGGC
CCATCCACGCCTTTGACAGGTGGCAGTGGTGCCATTCCATTTCCTCATCTAAAACCATCA
GTTTACCTGCAAGAGGGATTTGGAAACGTTTCTAAGCCCCTAAACAATCCCTATTCCAAC
GGCCCCTCCTATCATGATCCAAATGCCGACATCTTTCGAGGGATGCAGCTAGGGTCTCAC
ATATTCCCAGAAAGTGATGCTCTTGGAAAGCAGTTTGGGAGGACTGCTCATGTAGAATTG
TATGATGGGCAGTCAGTCTTAGCTGATCGCGTCTCTCGGCAGCTCTTAAGGGATCAAGTG
AAGATGAATCCATCTCTGGATCTTAGTCCCTCCTCTATGTTGCCCAGCCGGAACACTGGA
ATCTAACTTCA