Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0050g00720.t01
CDS Infomation

cds chromosome:12X:16:17660018:17670939:-1 gene:VIT_16s0050g00720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCAGAAAGTGCTATGGCAGTTGTGAAACCTGAGATGAAGTCTTATATCTGGCTCCAA
ACTGCTGATGGTTCTATTCAACAAGTTGAAGAAGAGGTTGCCATGTTTTGCCCCATGATA
TGCCGAGAAATACTTCAGACTGGCATGGGATCTTCCAAAAATTATGCCATATCACTTCCA
CAACGAGTCAATCCTGCTATCTTGGGCTTAATACTTGATTACTGTCGGTTTCATCAAGTA
CCAGGTCGCTCAAATAAGGAGCGGAAATCCTTTGATGAGAAGTTCATTCGGATGGATACA
AAAAAGTTATGTGAGTTGACATCTGCTGCTGACAGCCTCCAGCTGAAGCCTTTGGTTGAC
CTCACCAGCCGTGCACTTGCTCGAATTATTGAGGGGAAAACTCCTGAGGAAATTCGTGAG
ACGTTTCATTTGCCTGATGATCTTACAGAGGAGGAGAAGTTGGAGCCCTTGAGAAACATA
ACTGATGATCCACGGATTCGGCTATTGAATAGATTATATGCAAGAAAAAGGAAAGAATTA
AAAGAGAGAGAGAAATTGAAGAATGTTGAGGTTGAAGAGGAGCGTGTGGATGAGCGTTCG
GTGGATGATCTCCTGTCATTTATTAATGGTGAAGATGGAGATTCTAAAGGGGTTAGAGCT
TCTAAGAATAAAAAAAAAAATCGGAGAAGAAAGGATCAAATGAAGGACTCTTCTTCAAAC
AATGTAAATGGAGACCATAAAAAGGAGTTGGATGGAGTCCACACATCTTGCCATAATGCC
GAGGCTGATGAAATGTTGGTGTCCACCCCTAGTAAAACTTCAAAATTGCAGGAACTTCCT
GCTTCCACCTTTTCACCTAAACTTGAGTTTGACGATGGAGATATTGATGATGAGTTAGAT
CCTGCAATGAAGGAACAACTTGACAGGGAAGTGGAGGATTTTGCTCGGAGATTGAATTCA
GATTGGCCGGAAAGAATGCAAGAAATTCTCTCTCTGGGTCAACAAAGAAGGCTTGTACCA
ATATCTATGAATGGGAATGGTTCTGCTCATAGGTACACAAGTTTGGACAGCAGATAA

Peptide Sequence

PEP ID

VIT_16s0050g00720.t01
PEP Infomation

pep chromosome:12X:16:17660018:17670939:-1 gene:VIT_16s0050g00720 transcript:VIT_16s0050g00720.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSESAMAVVKPEMKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP
QRVNPAILGLILDYCRFHQVPGRSNKERKSFDEKFIRMDTKKLCELTSAADSLQLKPLVD
LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKEL
KEREKLKNVEVEEERVDERSVDDLLSFINGEDGDSKGVRASKNKKKNRRRKDQMKDSSSN
NVNGDHKKELDGVHTSCHNAEADEMLVSTPSKTSKLQELPASTFSPKLEFDDGDIDDELD
PAMKEQLDREVEDFARRLNSDWPERMQEILSLGQQRRLVPISMNGNGSAHRYTSLDSR

Transcript Sequence

Transcript ID

VIT_16s0050g00720.t01
Transcript Infomation

cdna chromosome:12X:16:17660018:17670939:-1 gene:VIT_16s0050g00720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCTCTCTCTCTCTCTAAAATTTTCTCTCTCCATAAGCTCCTTCATCTCTCTCTCTCTTCC
CTCATCTATCCATTTCACATCTCTATCTTCTCCTCTTAAACTACATTTTCACCTCATCTC
TCTCCCTCAGCTTCAAGCAGAGTTAGAAAGACTGAGAAAGCTCTCCAGATAAGAAATGCT
AATTCTTATTTTGGGATTTGGTATTGTGCCATTTTGGGAATCAGTGATAAAGAAGGCAAA
TCTTCCATTTCCTTTGTTTCTTTCAAGTTTCTGAAATTGGAGGTGCAAGGTTCTTGTTCT
TTACTAAGATCAGCTGTCATCATCAATGTCAGAAAGTGCTATGGCAGTTGTGAAACCTGA
GATGAAGTCTTATATCTGGCTCCAAACTGCTGATGGTTCTATTCAACAAGTTGAAGAAGA
GGTTGCCATGTTTTGCCCCATGATATGCCGAGAAATACTTCAGACTGGCATGGGATCTTC
CAAAAATTATGCCATATCACTTCCACAACGAGTCAATCCTGCTATCTTGGGCTTAATACT
TGATTACTGTCGGTTTCATCAAGTACCAGGTCGCTCAAATAAGGAGCGGAAATCCTTTGA
TGAGAAGTTCATTCGGATGGATACAAAAAAGTTATGTGAGTTGACATCTGCTGCTGACAG
CCTCCAGCTGAAGCCTTTGGTTGACCTCACCAGCCGTGCACTTGCTCGAATTATTGAGGG
GAAAACTCCTGAGGAAATTCGTGAGACGTTTCATTTGCCTGATGATCTTACAGAGGAGGA
GAAGTTGGAGCCCTTGAGAAACATAACTGATGATCCACGGATTCGGCTATTGAATAGATT
ATATGCAAGAAAAAGGAAAGAATTAAAAGAGAGAGAGAAATTGAAGAATGTTGAGGTTGA
AGAGGAGCGTGTGGATGAGCGTTCGGTGGATGATCTCCTGTCATTTATTAATGGTGAAGA
TGGAGATTCTAAAGGGGTTAGAGCTTCTAAGAATAAAAAAAAAAATCGGAGAAGAAAGGA
TCAAATGAAGGACTCTTCTTCAAACAATGTAAATGGAGACCATAAAAAGGAGTTGGATGG
AGTCCACACATCTTGCCATAATGCCGAGGCTGATGAAATGTTGGTGTCCACCCCTAGTAA
AACTTCAAAATTGCAGGAACTTCCTGCTTCCACCTTTTCACCTAAACTTGAGTTTGACGA
TGGAGATATTGATGATGAGTTAGATCCTGCAATGAAGGAACAACTTGACAGGGAAGTGGA
GGATTTTGCTCGGAGATTGAATTCAGATTGGCCGGAAAGAATGCAAGAAATTCTCTCTCT
GGGTCAACAAAGAAGGCTTGTACCAATATCTATGAATGGGAATGGTTCTGCTCATAGGTA
CACAAGTTTGGACAGCAGATAATGATCCCCTAATAGATAGCTCATTTCCCAGAAAGCGGT
TCAGCTTGAGTGTTGTAGAGAAGACGCTCGAGCAGGAGCGTCCTGCAGCCAGAACATAGA
AGATATGGCAATGTTTTTTGGTGTGGACAGCATGTAAGTATATTTGTTTGTTTTGCCATC
ACCAAGATGCAATTTTAGTCCTGTTTTGGCATCCTGTATGTTGGGGAAAAAAAGGAAGGA
AAAAAAAAAAGGAAACCAAAAACGAACTATTGAGACAATTTGGGCAAAATCTGCCCATTT
GTCTTTGACCTTGTTTTGTTTTTGCGGTTGTTTGTAACTTTCAGCCATTGACATGGGCTA
TCTTCTGCACTTTA