Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0050g00700.t01
CDS Infomation

cds chromosome:12X:16:17650036:17657324:1 gene:VIT_16s0050g00700 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCAGTTGCAAGACTCAAGGATTCTAGTACTTCAGATGCAATGAAATCAGAAGATGGA
AATGATTCTCTGGACAGTTTCATCAGACAAGCAATAGGAAAAGAGCCTTTTCTTTCTTTC
TCAAGGGCCGGGGAAAGTCCAGTACAGTGGATCCAATTACTCCATGCTTTAGATCAGCAA
GATCTCCCTGGTTGGCCATTGCTTTCTCCTTTGAAGGTACAAATGCAGAAGTGTGAGAAG
TGTTCCAAAGAATTTTGTTCACCCATTAATTACCGAAGACATATACGTGTACACCGTCGG
ACTTTGAACATTGATAAGGATTCAACTAAAAACAGGAATCTATTAGGAGCATTTTGGGAT
AAGCTCTCTGTGGATGAGGCTAAGGAAGTTGTATCATTCAAGAATGTTTCACTCGAGGAA
GTTTCTGGGTCTTCAATTGTGAGGGCATTGACATCATTTGTCCGGAAGCCAGGATTTTCT
TCTCTTCCACAAGTATATATGAAGGCTGGTTCTGCCCTTTTGGATATTGTCCAATCTAGA
CCTTCCAGGTTCCCAATATCCTCCCAGGATTTATTCAGTATCCTTGATGATGCAAGTGAA
AAAACATTTTTATGTGCTGGCACAGCTGAATCAATGCAAAAATATGTTTTTGATGGGGAA
GCTGGGAAGATTGGTTTGGAGATGAAAAACTTAGTTGCTTGCACCTGCTTCCTGGTAGAA
CAGAAACTGGTTAAGGCATGGCTTGCTGACAAGGATGCTGAAGCTTTGAGGTGCCACAAG
TTGCTTGTGGAAGAGGAAGAAGCTGCTCAGAAAAGGCAAGCCGAGCTGTTGGAGAGGAGA
AGGCAGAAAAAGCTTAGGCAGAAAGAACAGAAAGCAAAGGAGCAGACCAATGGGGAGAAG
ACAGACTCTAAGGAGGACATCACCAACATGTCAGAGGTTGTGCCTACTGCAGAAATTTCC
AGTCATGTGGCTACAACCGTTTGTGAGACAGCCACACAATCAGATGCCATTTCTCCATCA
GTTGAACCCATAGAACTTTCAAACACTGAAAAAGATAGTGCAAATACCACAGCTCAATCT
GGAATTGGTGCTGGATATTCTGAAGCAGGCACTTCTCAGAATGTTGAACGCCGAGTTGCA
TACGGAGTTGGTTGTCGGCATTTAATTAAAATGCGAAGACAGGTGCCAAAATCACAGAGA
GGCGCACCAAATGGCTTCCATGCAGATCAGAATCCTCAGATATCAAAGTTTGGAGCCATA
CAAAAGCATGCCACCCACAGGGATCCCAGGGCTGTTCCAGTAGTCAACAACAATAAAGTT
TGGACCCGTAAACCTAAATCAGAAAATGAAGGGGAAAGCTTGAAAAGCAGATTACAGAGA
GAGGTACTAAACCAACCAGATCAAAATATGAACTGTGAGGTGATGATAGGTTCTATCTCT
GTCACACTTGGAAATTCTAGTGATCAGCTACAAGGTGAGAATCTAGTTGTAGCCCGAGAT
AGTTGCACCTCACAGCATCCAATGCCAAAGAAAACCTATATTCAGGAGAAGCCCATTAAA
CCAGATTCTGTTTCTATGAAGCCAGATCCAGCTCAGAGTGGCACAAATAGGTCAACAGTT
AAACTTTGGAGGCCTGTGAACCGACAGGAAACTGGAGGTTCAATGCCAGTTCAAAGTGGC
AATAGAGAATCTGAAGCTGGTGTGGCTACTGAGAAGGGAAATGACCTAACCCTGTCCGAT
GAAAGCTGCATCAGATCATGTGCTATGGACATTAATAGTAGCACAGGTGTGAACAATTTC
GCTTCACAGATGAAGGAAAGACCATCTGTAGGAGGTTTTCAGTTCTCCAGCTGTGCTGCA
GAAGCTTTTCTCGCACAGAGATGGAAGGAGGCTATTGCTTCAGACCATGTGAAACTGGTC
ATATTTCCAGAATCCGAGCCTCCAGGATGCACAGAACCAGCATCAGACAATCTTGTCAAG
ACACAGAACAACCTTGCTAATGCCGGGGCTCTCGAGTCTTCAACCTCGGCAACTGTCAAA
GTCAAGTTCAGACCAATGTCCGAAAAGGGAATTAAGCTAAAGTACATTCCAAAAAAGAGA
ACCAATACCTGA

Peptide Sequence

PEP ID

VIT_16s0050g00700.t01
PEP Infomation

pep chromosome:12X:16:17650036:17657324:1 gene:VIT_16s0050g00700 transcript:VIT_16s0050g00700.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPVARLKDSSTSDAMKSEDGNDSLDSFIRQAIGKEPFLSFSRAGESPVQWIQLLHALDQQ
DLPGWPLLSPLKVQMQKCEKCSKEFCSPINYRRHIRVHRRTLNIDKDSTKNRNLLGAFWD
KLSVDEAKEVVSFKNVSLEEVSGSSIVRALTSFVRKPGFSSLPQVYMKAGSALLDIVQSR
PSRFPISSQDLFSILDDASEKTFLCAGTAESMQKYVFDGEAGKIGLEMKNLVACTCFLVE
QKLVKAWLADKDAEALRCHKLLVEEEEAAQKRQAELLERRRQKKLRQKEQKAKEQTNGEK
TDSKEDITNMSEVVPTAEISSHVATTVCETATQSDAISPSVEPIELSNTEKDSANTTAQS
GIGAGYSEAGTSQNVERRVAYGVGCRHLIKMRRQVPKSQRGAPNGFHADQNPQISKFGAI
QKHATHRDPRAVPVVNNNKVWTRKPKSENEGESLKSRLQREVLNQPDQNMNCEVMIGSIS
VTLGNSSDQLQGENLVVARDSCTSQHPMPKKTYIQEKPIKPDSVSMKPDPAQSGTNRSTV
KLWRPVNRQETGGSMPVQSGNRESEAGVATEKGNDLTLSDESCIRSCAMDINSSTGVNNF
ASQMKERPSVGGFQFSSCAAEAFLAQRWKEAIASDHVKLVIFPESEPPGCTEPASDNLVK
TQNNLANAGALESSTSATVKVKFRPMSEKGIKLKYIPKKRTNT

Transcript Sequence

Transcript ID

VIT_16s0050g00700.t01
Transcript Infomation

cdna chromosome:12X:16:17650036:17657324:1 gene:VIT_16s0050g00700 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGGCCGATCACTTTCTCGCATTTTCTCCCCCATTTTCTTTCCCGCCAAACGTCCCCTGCC
CATCTCCCAAAACCTCCCGTAGCTTGGATCATTGGCGATTCTCTCGCACCGATCTCTCTC
TCAAATCGCCACTGCGACATTTTATGAGCTAGTAAGTTTCTAAAGTTTGTATCTGCATAG
ATGCCAGTTGCAAGACTCAAGGATTCTAGTACTTCAGATGCAATGAAATCAGAAGATGGA
AATGATTCTCTGGACAGTTTCATCAGACAAGCAATAGGAAAAGAGCCTTTTCTTTCTTTC
TCAAGGGCCGGGGAAAGTCCAGTACAGTGGATCCAATTACTCCATGCTTTAGATCAGCAA
GATCTCCCTGGTTGGCCATTGCTTTCTCCTTTGAAGGTACAAATGCAGAAGTGTGAGAAG
TGTTCCAAAGAATTTTGTTCACCCATTAATTACCGAAGACATATACGTGTACACCGTCGG
ACTTTGAACATTGATAAGGATTCAACTAAAAACAGGAATCTATTAGGAGCATTTTGGGAT
AAGCTCTCTGTGGATGAGGCTAAGGAAGTTGTATCATTCAAGAATGTTTCACTCGAGGAA
GTTTCTGGGTCTTCAATTGTGAGGGCATTGACATCATTTGTCCGGAAGCCAGGATTTTCT
TCTCTTCCACAAGTATATATGAAGGCTGGTTCTGCCCTTTTGGATATTGTCCAATCTAGA
CCTTCCAGGTTCCCAATATCCTCCCAGGATTTATTCAGTATCCTTGATGATGCAAGTGAA
AAAACATTTTTATGTGCTGGCACAGCTGAATCAATGCAAAAATATGTTTTTGATGGGGAA
GCTGGGAAGATTGGTTTGGAGATGAAAAACTTAGTTGCTTGCACCTGCTTCCTGGTAGAA
CAGAAACTGGTTAAGGCATGGCTTGCTGACAAGGATGCTGAAGCTTTGAGGTGCCACAAG
TTGCTTGTGGAAGAGGAAGAAGCTGCTCAGAAAAGGCAAGCCGAGCTGTTGGAGAGGAGA
AGGCAGAAAAAGCTTAGGCAGAAAGAACAGAAAGCAAAGGAGCAGACCAATGGGGAGAAG
ACAGACTCTAAGGAGGACATCACCAACATGTCAGAGGTTGTGCCTACTGCAGAAATTTCC
AGTCATGTGGCTACAACCGTTTGTGAGACAGCCACACAATCAGATGCCATTTCTCCATCA
GTTGAACCCATAGAACTTTCAAACACTGAAAAAGATAGTGCAAATACCACAGCTCAATCT
GGAATTGGTGCTGGATATTCTGAAGCAGGCACTTCTCAGAATGTTGAACGCCGAGTTGCA
TACGGAGTTGGTTGTCGGCATTTAATTAAAATGCGAAGACAGGTGCCAAAATCACAGAGA
GGCGCACCAAATGGCTTCCATGCAGATCAGAATCCTCAGATATCAAAGTTTGGAGCCATA
CAAAAGCATGCCACCCACAGGGATCCCAGGGCTGTTCCAGTAGTCAACAACAATAAAGTT
TGGACCCGTAAACCTAAATCAGAAAATGAAGGGGAAAGCTTGAAAAGCAGATTACAGAGA
GAGGTACTAAACCAACCAGATCAAAATATGAACTGTGAGGTGATGATAGGTTCTATCTCT
GTCACACTTGGAAATTCTAGTGATCAGCTACAAGGTGAGAATCTAGTTGTAGCCCGAGAT
AGTTGCACCTCACAGCATCCAATGCCAAAGAAAACCTATATTCAGGAGAAGCCCATTAAA
CCAGATTCTGTTTCTATGAAGCCAGATCCAGCTCAGAGTGGCACAAATAGGTCAACAGTT
AAACTTTGGAGGCCTGTGAACCGACAGGAAACTGGAGGTTCAATGCCAGTTCAAAGTGGC
AATAGAGAATCTGAAGCTGGTGTGGCTACTGAGAAGGGAAATGACCTAACCCTGTCCGAT
GAAAGCTGCATCAGATCATGTGCTATGGACATTAATAGTAGCACAGGTGTGAACAATTTC
GCTTCACAGATGAAGGAAAGACCATCTGTAGGAGGTTTTCAGTTCTCCAGCTGTGCTGCA
GAAGCTTTTCTCGCACAGAGATGGAAGGAGGCTATTGCTTCAGACCATGTGAAACTGGTC
ATATTTCCAGAATCCGAGCCTCCAGGATGCACAGAACCAGCATCAGACAATCTTGTCAAG
ACACAGAACAACCTTGCTAATGCCGGGGCTCTCGAGTCTTCAACCTCGGCAACTGTCAAA
GTCAAGTTCAGACCAATGTCCGAAAAGGGAATTAAGCTAAAGTACATTCCAAAAAAGAGA
ACCAATACCTGACCAAAAGGAGGAAAGGAATTCCATTTTTGTTATACCAATGTGCAGTTT
TAACCCACCATCGCCATTCTTAGCAGAGGTTCCAGTTTTACCAAAGGTCTTCTGTCAGAA
AATTAAAAGGTTTTTTTCTGGTAAAATCTTTACATTTACATTTTTGCCCTTTTTTTTCAA
TTTCTTTTCCCCCACCCTGGGTTGTTATAGGAGTTTGATTAGTAAGGGTTTTTGCTTTCA
TTGTCTAAATTTTCTTGTAATAAAATTGGATATCTTAGTTTTATTGCAGAGAGCTCTA