Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0050g00660.t01
CDS Infomation

cds chromosome:12X:16:17607779:17614038:1 gene:VIT_16s0050g00660 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP complex subunit sigma [Source:UniProtKB/TrEMBL;Acc:F6H6L3]
Sequence

ATGTATCTAAAATTTGGGATATTCAACATCCTCTTCCTGGCCAAATTGCATATTCATTTT
GTGCTTCTCATTAGTCGACAAGGAAAAGTGAGGTTGACAAAATGGTATTCACCTTATACT
CAAAAGGAAAGAACTAAGGTAATTCGAGAGCTCAGTGGCGTAATTCTGACCCGAGGTCCC
AAGCTTTGCAACTTCGTGGAGTGGAGGGGATATAAAGTTGTCTACAAAAGATATGCGAGC
CTGTATTTCTGCATGTGCATTGACCAGGATGACAATGAATTGGAGGTCCTTGAAATAATC
CACCATTATGTTGAGATACTGGACCGCTATTTTGGCAGTGTCTGTGAGCTGGATTTGATT
TTTAATTTCCACAAGGCTTATTATATATTGGATGAGCTTTTGATTGCTGGTGAACTTCAA
GAGTCAAGCAAGAAGACAGTTGCACGGCTGATAGCTGCACAGGATTCGTTGGTGGAGACT
GCTAAAGAGGAGGCCAGTTCAATAAGCAATATAATTGCTCAAGCCACCAAATAA

Peptide Sequence

PEP ID

VIT_16s0050g00660.t01
PEP Infomation

pep chromosome:12X:16:17607779:17614038:1 gene:VIT_16s0050g00660 transcript:VIT_16s0050g00660.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP complex subunit sigma [Source:UniProtKB/TrEMBL;Acc:F6H6L3]
Sequence

MYLKFGIFNILFLAKLHIHFVLLISRQGKVRLTKWYSPYTQKERTKVIRELSGVILTRGP
KLCNFVEWRGYKVVYKRYASLYFCMCIDQDDNELEVLEIIHHYVEILDRYFGSVCELDLI
FNFHKAYYILDELLIAGELQESSKKTVARLIAAQDSLVETAKEEASSISNIIAQATK

Transcript Sequence

Transcript ID

VIT_16s0050g00660.t01
Transcript Infomation

cdna chromosome:12X:16:17607779:17614038:1 gene:VIT_16s0050g00660 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP complex subunit sigma [Source:UniProtKB/TrEMBL;Acc:F6H6L3]
Sequence

ATGTATCTAAAATTTGGGATATTCAACATCCTCTTCCTGGCCAAATTGCATATTCATTTT
GTGCTTCTCATTAGTCGACAAGGAAAAGTGAGGTTGACAAAATGGTATTCACCTTATACT
CAAAAGGAAAGAACTAAGGTAATTCGAGAGCTCAGTGGCGTAATTCTGACCCGAGGTCCC
AAGCTTTGCAACTTCGTGGAGTGGAGGGGATATAAAGTTGTCTACAAAAGATATGCGAGC
CTGTATTTCTGCATGTGCATTGACCAGGATGACAATGAATTGGAGGTCCTTGAAATAATC
CACCATTATGTTGAGATACTGGACCGCTATTTTGGCAGTGTCTGTGAGCTGGATTTGATT
TTTAATTTCCACAAGGCTTATTATATATTGGATGAGCTTTTGATTGCTGGTGAACTTCAA
GAGTCAAGCAAGAAGACAGTTGCACGGCTGATAGCTGCACAGGATTCGTTGGTGGAGACT
GCTAAAGAGGAGGCCAGTTCAATAAGCAATATAATTGCTCAAGCCACCAAATAAGATCTG
TATTTAAATGAGTTGGTCTGTATACTCCCCTGGTTGGCAGTGTTCAATATGATACAATCT
CTCATTTTGTTTCTTAAATTCCGTATTCGCTCAAGCCATCATATTTTTTGTTGTAAAAAA
TAAAAAATTGTTTTCTATTTTTAAAAACAAAATACTATTTTTGTTTCTGGTTCT